Cova010141.1
Basic Information
- Insect
- Chaetogeoica ovagalla
- Gene Symbol
- mecom-b
- Assembly
- GCA_032441825.1
- Location
- CM063733.1:8502675-8519694[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.15 3.7e+02 1.6 0.0 15 26 115 126 109 141 0.71 2 9 1.7 4.2e+03 -1.8 0.2 19 38 149 165 143 171 0.80 3 9 3.8e-05 0.095 13.1 1.3 14 43 171 197 164 198 0.89 4 9 0.056 1.4e+02 2.9 0.3 19 38 205 221 202 226 0.89 5 9 0.75 1.9e+03 -0.7 3.7 4 38 219 249 216 254 0.78 6 9 6 1.5e+04 -3.6 3.5 8 30 251 273 244 278 0.69 7 9 2.9e-05 0.072 13.4 0.1 18 41 734 754 726 756 0.87 8 9 9.5e-05 0.24 11.8 2.5 17 44 761 785 754 785 0.88 9 9 0.00092 2.3 8.6 2.7 10 40 783 810 780 812 0.86
Sequence Information
- Coding Sequence
- ATGGTTCGTGTAGCCGGTTATTCGGGATACCTGGACGGGacgattgaaatttgtaacTGGCTGAAATTTATCCGGTGTACCAACGACAGCAGTAGACAAAACGTCCGAGCGTTTCTACTAGCCGGACAGATATTCTACGAATTGACACATACGGTCAGGTGTTCGGAAGAACTACTGTTGGGCAAGAGAGAACCGTTGAATTTGGACGCGGCTTTTGGAGAATTAATGGCTACGTCTGCGGAGGATCGAAGCGAAAGGGATTCAGTTGTCGCGTCGCAAAACTCGCTGGGCGGTTCCATTGACGGCGACGTGGACGGCGACGCGGAGGAGCCGGACGAAGACGATCAAAACCGATGTATCTTGTGCGAGAAATGCTTTCCCGACATTGAACAATTGGACGATCATTTGGTGTCCGGTCACCATTACAAGGCCAACCAATACGGCTGCGATCTGTGCCCGCAATCGTACAGCTGGAAACCGTGTCTGATCAGACACTCGGCACTAGCTCACAGCAGGAAATTCACTTGTGAAACGTGTTCGAAGGTGTTCAGCGATCCGAGTAACCTGCAAAGGCACATCCGGACGAATCACGCGGGCGCTCGATCGCATGCGTGTTCCGAATGCGGTAAGACGTTCGCCACGTCCAGTGGACTCAAACAGCACACGCACATACATTCTAGCGTGAAACCGTTCCAGTGCGAGGTGTGTTTCAAGGCGTACACTCAGTTTTCAAACCTCTGTCGTCACAAGAGGATGCACGCGGACTGTCGCATGCAAGTGAAGTGCGACCGTTGCGATCAGTCGTTCAGCACGGGCACGTCGTTGTCCAAGCACAAACGGTTTTGCGAGTCCAGCTCGTTACCGACgtccagcagcagcagcgcgcCGACCACGCCAAACATGtcacagcagcagcagcagcagcagcagccgcaACACGGATCGTCAccgttttcaacgttttactCGAGATTCCCGTTGTACCCGCCGCATCCGCTCCATTCGTTCTATTTCCCGCCGGCCAACGGATCGttgccgccgccaccaccgccgccaccgttGTTCCCGACGCCGTTCGGCTCGTTCGGACAGTTTGCGCCCAAGCTGATCAACATGGACTTGTTGCACTCGTTACCCGGCGGCGGAGGCGGCACCGTGCACGACGCGAACCGTTTCAAGCGGATCACCGAATCCGGAGAACAAAACGAGACGCCGGCTAAaaagacgtcgtcgtcgtccaacAATAACGCGAATGAAAAaactccgtcgtcgtcgtcgtcgttgtccagctccgccgccgccgccgcgttgcTAATGGGCTCGAGCAAAACGTCGCCGCTGGTCGGCGAGGAGGCGTCGTCCAACCAGAGGCCGTCGCCCGCCCGGCCGAACGTCACTACGTATCCGGATCCGAAGGTGATCAAACGGGAACCGTCCGCGGACGAAGATTGCGGCGGCCCGTGCGATCTGTCCGTGAACACGGACGTGGAAGCGGACTACGAGACGGCGGCGGACGCGGAACGACGCGGACGTCGGCaccggcgacggcggcgcTCCGAGTCTACCGACGGCGGTGACAGGTCCGATCAGCCGTTGGACCTGTCCGTCACCAAAGAACAGGGGCGGGAGGAGTCGTCGATGACGACCTCGGTGACCGCGACCGGTCCGAACGCCGCCGCGGTGGCGGTCCGTTCTTCGGCGAGCCCTGTCCGCGAAGAACAACAACGGCCGATACGACGCGAGCACAAGACGACCGCCGGCGacgatggtggtggtggtaaatGGTCTTCGCGGCGTATATCGCCCGCGCCCCCGTCCTCGCCGTACTCGGTCGGCAACCTAATGGCGCATCCCAAACCGCTGTACTTGGACTCGATTTACCATCCGACGTCGTTGTCGAGCTTCGCCGAGAGCCAACTGATGCAGACGTATCACCAGTCGTTCGGACAGGCCTCTGCTGCGAGCCGTCCGTTCCCGTTCATCATGTCCGGCGGCAGCCCGTCTTCGGCAGCCGctgccgctgccgccgccgctgccgcagCCGAACACTTTCTCCGGCAGCCAATGACCAATTATCCGAAGGCGTACCAAGAGATCGTACAGCgtcaacagcagcagcagcacggACAGCAGCACggacagcagcagcagagCGGAGGCGGCACTGTTATCGGCCCGGTCAAGTCCAAGGACCGGTACGCGTGCAAATACTGCGGCAAAGTGTTTCCGCGCAGCGCCAACTTGACCAGACACGTGCGCACGCACACGGGTGAACAGCCGTACCGATGCGCGCACTGCGAACGCTCGTTCAGCATATCGTCGAACCTGCAGCGGCACGTGCGTAACATTCACCGGCAAGAGCGCAACTTCAAGTGCAACCTGTGCAACAGACGGTTCTCGCAGCAGACCAACCTGGACCGGCACGTGAAAAAGCACGAGGCGGACGACGGGACGGCCGTCGGCGCCGTCACCAGCAGCTCGGCGAGCAGCGTGGACGAGAAGGAGGACCCGAGGCTGTTCGAGATCCGGAGCTTTATGAAAAAAGTCACGGAAAGCTCGGCGGCCGAGATGCGCAACAACAACATCGACCCGTGTCTGCCCGACGACGGTTTGTACGCGGCCCCGTTATGA
- Protein Sequence
- MVRVAGYSGYLDGTIEICNWLKFIRCTNDSSRQNVRAFLLAGQIFYELTHTVRCSEELLLGKREPLNLDAAFGELMATSAEDRSERDSVVASQNSLGGSIDGDVDGDAEEPDEDDQNRCILCEKCFPDIEQLDDHLVSGHHYKANQYGCDLCPQSYSWKPCLIRHSALAHSRKFTCETCSKVFSDPSNLQRHIRTNHAGARSHACSECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQVKCDRCDQSFSTGTSLSKHKRFCESSSLPTSSSSSAPTTPNMSQQQQQQQQPQHGSSPFSTFYSRFPLYPPHPLHSFYFPPANGSLPPPPPPPPLFPTPFGSFGQFAPKLINMDLLHSLPGGGGGTVHDANRFKRITESGEQNETPAKKTSSSSNNNANEKTPSSSSSLSSSAAAAALLMGSSKTSPLVGEEASSNQRPSPARPNVTTYPDPKVIKREPSADEDCGGPCDLSVNTDVEADYETAADAERRGRRHRRRRRSESTDGGDRSDQPLDLSVTKEQGREESSMTTSVTATGPNAAAVAVRSSASPVREEQQRPIRREHKTTAGDDGGGGKWSSRRISPAPPSSPYSVGNLMAHPKPLYLDSIYHPTSLSSFAESQLMQTYHQSFGQASAASRPFPFIMSGGSPSSAAAAAAAAAAAAEHFLRQPMTNYPKAYQEIVQRQQQQQHGQQHGQQQQSGGGTVIGPVKSKDRYACKYCGKVFPRSANLTRHVRTHTGEQPYRCAHCERSFSISSNLQRHVRNIHRQERNFKCNLCNRRFSQQTNLDRHVKKHEADDGTAVGAVTSSSASSVDEKEDPRLFEIRSFMKKVTESSAAEMRNNNIDPCLPDDGLYAAPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00309003;
- 90% Identity
- iTF_00309003;
- 80% Identity
- iTF_00309003;