Cova010729.1
Basic Information
- Insect
- Chaetogeoica ovagalla
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_032441825.1
- Location
- CM063734.1:5211582-5223947[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-17 1.2e-13 50.9 0.0 1 39 353 392 353 396 0.94 2 2 1.9e-18 2.8e-15 56.1 0.0 1 43 937 980 937 982 0.94
Sequence Information
- Coding Sequence
- ATGGGAAGAAGAAAATGGCACCAGTATCAAGACATTTtggcgaaaaattatttactggaAGAAGAATTGATGGACCGGAGGGAATGGGTTCCCGTCAAATCGTGTAATTCGTGTGATGTGAACGCGGACCTGAGCGGAGCTGAACACTCACCTGTAGAACTGGAGCCGTCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGTCGCAGCGCAGACAGTCCGGAACCGGAGCCGGGCAGACGGTCGTCGCCGCCTGTGCCGCCGACGGCCACTGCTGCAGAGCCGTGTCGCGCCGCTTACGACCGGACGctgcagccgccgccgccgccgccgccgccgccgtcgtccaCCACACACCTGTTACAACTGTCCGACGACCCGTccgccgcagccgccgccgccgccgcagcaaTGGCCGCGGTAGCGTCGCTCAacaattcgtcgtcgtcgtcgtcgtcgtcgtcggcggcggtggcggccaCGACGGCGGCCACGTCGGCAGGCGGTCCGCTATCGCCGAACGCGCTGGACGTCGCGGCCGCCGGTCTACCGAAATGGCTGTTGGCCGCCGCAACGCTGAGACTACAAGAGACCACGGCCGCCGCAGCCGCAGCGGCCGCTACCGCCGCCGCCAGTAGGTCGCCTCCCGACCACCGTCACCTGCACCAACATCACCACCGtcaacagcagcaacaacaaccgCTTCACCATCAGTCGCCGTCGGCCGACCAGCCGCTCGATCTCAGCGCAAagagcaacaacaacaacggtggcggcggcggcggctcgaCGACCGTCGTCGGCGctttctcgtcgtcgtccgcaTCGTCCACGCCGTCGTCCGACCCGAAAAACGCGCCCGTCATCATCAACCCGTTCACGTCAGATCTCATCGCCTCGGACATTGTGCAAAACCTGCACAACCTAATACCGAGCGCGTCCACGTTCCTACCGCACCAATCGCTCAAGATCATACCTTCACTCAACGCCAACAACCGGAACGTGTTCAAATCGAAGACGACCAAACAGCCCAGTCACATGGCCGGACGGAAGACGTACACCGAGGACGAGCTGCAAGCCGCGCTCCGGGACATTCAGAGCGGCAAGTTGGGGACAAGAAGGGCGGCCGTATTATACGGCATACCGAGATCGACGTTGCGTAACAAAGTGTACAAAATGGCACTGGAACGGGACAGTGGCGGCGGGATTTGCAGAGACCCGTCGACGGTGGGCGATGACGCGTGCAAAGTGGCGGCCGCGGAACTGTTACCAATGTTGGTGGccgaggacgacgacgacgacgatcgggACACGGTGTCCGCGGGCGAAGAAGATTGCGGTCGCGCTCCGTCAGAGACAATGGAAAAAGAGAAGGACAACAAGGAACATCAGttgcaacaacaacaacaacaacatcaaCAATACCATCAccaccaacaacaacaacaacaccatCATCGTCACCACCAACACCGTCAGCACCGTCAACAACCGAGAACGTCGTCGCCATACATGACCGTCGAAGACCTGTTTCGATTCACAACGGAACAACAACAGCatcaacagcaacaacaagtGGCCGCGGCTGCGGCCGCTGCGGCTATGCCCACCGCCGAAACGATCAGACTGTTCCTGCAGCATTGCGCCGCCAACAACAAACTAATGCAACCGCCGGAAAACCGTGGGTATCGCGGTGGTGACGCGACGACCGCGGAATGTCGATCGCCGTCACCCGCACAACCGTCACCGGCCGGTAGGTTGCCCGCGCTACCACCACCTCCCATGGCCGCGGAACTGTGGCCTGTGgccgccgcggccgccgcTGCGCTCGACCCGCAAAACATGGGCACGTATCTGTCCCGATTGTTGTCCACGTCGGCCGTCACCGCGTCGCCGTCGGCCGGTCTCGTCTCGCCGCGTTTGCCGACGCACGAgagtccgccgccgccgccaccgcagcagcagcagcagcagcaggcCATTCCGCCTCACCCGCAAGACTTTCTCAAAGGGTTCACCGTCACGGAGATCATGCGCAAGATACTGGACGACGAGCAACAGTTACAACACGCCGGCGGCAAGTCGATGGATCCCAGCAGCAGACGGTGGTCGTCCTCGAACGGTTTCAATTCGTCCGAACCGTTGTCAATGGACACGGGACGGAgcaacgacgacgattcgAACCCGTCCAACGTTATACTGCGAATACCGACGTATAACAAGTCGGCGCCCGGCAAGCCGGGCGATTACGATTCGTCGGGCTGCAGAGAACTCCGGTCCCCGGGGCGAGCCAGCAGCGTCAGGAGCGACACGTCCTCGCCGCCATCGTCGTCCGGCGGAGGCGGCGGCGTCGGTAAACTTCCGGTCAACTTGAGGGACGTGATCGCCAAGAGCATCACGAAAAACTTTCAAACCGCCACCGATCCGTCACCCATACCGACCGTCGAGTCGTTTGCCCGGGCCTACCACCAGTaccaacagcaacagcaacaacaacaaaagcAACAACAACACCACATGCCAACCGCGGCCGCCATGTTCGTCGGCACTGCGGGTAACGTCATCCCGAGGAATCACAACAATAACAATCTACTGGACGAATGCCGGAAACGGGTGCCCACGCCGACCAAGACCCCGttggcggcgacggcggcgtcCTCTTCTGGCGCCAGCGGATTTCACGCGAGCGGCTCGTCGCCCTCGTCCGCGTCCAATTCCGTGGCGGCCGCGGCAGCTGCGGCTGCTGCGGCAGCGGCCGCGGCTGCGGGCGGCAAAGGCACTCGGCCGAAACGGGGCAAGTATCGGAACTACGACCGGGACAGCCTGGTGGAAGCGGTGCGGGCGGTGCAACGAGGCGAAATGAGCGTGCATCGGGCCGGTTCTTATTACGGTGTGCCGCACTCGACGCTCGAGTACAAGGTCAAGGAAAGACATCTGATGCGGCCCAGGAAACGCGAGCCGAAGAACCCACCGTCCGCGTCTTCGGTGTCTGCCGCGGCGACCACGGCGACGGTCGCCGAACAACAGGAGGTCCGTAAAAAATCGTCCGACCTGTCGACCGTACGACCGTCGGCGGCCAcagtggtggcggcggcggaccACTTGCAGGCGTCGTCGGCCACATCACCGGTCGTCAAACTGCCCGCACACGCGGTGTTCCCTTCGCAACAACCGTCGCCGCTGCAGACGCCCAACGGGCTGAAAATGTTTGAAGCCGCCGCGTCCCCAGCGGTGGCCGGCCCGTACCAGCCGTCGTTCCCGTTCTGGGCGCCCAGCCCTTTCCACGTACCCATGGATTTCCAACGGAACCCGGTGCAAGCGTTCACGTCCATGTCGATGATGCAACGCATCCAAGCCGAGTCCCGGCTGCACCATCACCATCaggccgccgccgcagccgccgccgctgcgGCCGCCGCGGCGTCCATCGCGAGCCTGGGCAAAAACGCTCGCGAGGTGGCCGAGAACCTGTACGACGGCACGGACAACGGCAGCTTCCTGGACGGCATAATACGGTCCAGCCTGGAGACGGGGCTGAAACAATCGGTGGCCGCCATGTCGGCGGTACGACACGCCGGCAGCAGCGATCGCCGCAGCAGTAGCAGTGGCGACCGCAGTCCGGGACGCGCGGCCGCGCAGGACGAAGACGACGATGATGACGgtgacgacgatgacgacgaccgGGACGACGAAGatcgagacgacgacgatgacgacgaggACCTGCAAGACGCAGACGACCGTCGACGCGAAAAAGAAGCTGAAAACAACGGCGGCGGCCCGCACCCGGAAGACCGAAGCACCAACACGTCGGGTTCCGGCGTGAATCCGCACTCGGGTTCGGACACCGAGGACGAGCGAATCCACGGTTCCACCGAACCCGGGTTACCGTCGGCCGCGGTTTCGCCACCCGGCCACGCCGCCGATGAcgatctataa
- Protein Sequence
- MGRRKWHQYQDILAKNYLLEEELMDRREWVPVKSCNSCDVNADLSGAEHSPVELEPSSETGSLSGGSRSADSPEPEPGRRSSPPVPPTATAAEPCRAAYDRTLQPPPPPPPPPSSTTHLLQLSDDPSAAAAAAAAAMAAVASLNNSSSSSSSSSAAVAATTAATSAGGPLSPNALDVAAAGLPKWLLAAATLRLQETTAAAAAAAATAAASRSPPDHRHLHQHHHRQQQQQQPLHHQSPSADQPLDLSAKSNNNNGGGGGGSTTVVGAFSSSSASSTPSSDPKNAPVIINPFTSDLIASDIVQNLHNLIPSASTFLPHQSLKIIPSLNANNRNVFKSKTTKQPSHMAGRKTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKMALERDSGGGICRDPSTVGDDACKVAAAELLPMLVAEDDDDDDRDTVSAGEEDCGRAPSETMEKEKDNKEHQLQQQQQQHQQYHHHQQQQQHHHRHHQHRQHRQQPRTSSPYMTVEDLFRFTTEQQQHQQQQQVAAAAAAAAMPTAETIRLFLQHCAANNKLMQPPENRGYRGGDATTAECRSPSPAQPSPAGRLPALPPPPMAAELWPVAAAAAAALDPQNMGTYLSRLLSTSAVTASPSAGLVSPRLPTHESPPPPPPQQQQQQQAIPPHPQDFLKGFTVTEIMRKILDDEQQLQHAGGKSMDPSSRRWSSSNGFNSSEPLSMDTGRSNDDDSNPSNVILRIPTYNKSAPGKPGDYDSSGCRELRSPGRASSVRSDTSSPPSSSGGGGGVGKLPVNLRDVIAKSITKNFQTATDPSPIPTVESFARAYHQYQQQQQQQQKQQQHHMPTAAAMFVGTAGNVIPRNHNNNNLLDECRKRVPTPTKTPLAATAASSSGASGFHASGSSPSSASNSVAAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPSASSVSAAATTATVAEQQEVRKKSSDLSTVRPSAATVVAAADHLQASSATSPVVKLPAHAVFPSQQPSPLQTPNGLKMFEAAASPAVAGPYQPSFPFWAPSPFHVPMDFQRNPVQAFTSMSMMQRIQAESRLHHHHQAAAAAAAAAAAAASIASLGKNAREVAENLYDGTDNGSFLDGIIRSSLETGLKQSVAAMSAVRHAGSSDRRSSSSGDRSPGRAAAQDEDDDDDGDDDDDDRDDEDRDDDDDDEDLQDADDRRREKEAENNGGGPHPEDRSTNTSGSGVNPHSGSDTEDERIHGSTEPGLPSAAVSPPGHAADDDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -