Cova010880.1
Basic Information
- Insect
- Chaetogeoica ovagalla
- Gene Symbol
- JARID2
- Assembly
- GCA_032441825.1
- Location
- CM063734.1:7409233-7420961[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 3.5e+03 -1.2 0.0 44 68 505 529 496 540 0.76 2 3 1.4e-20 4e-17 62.7 0.0 6 89 1612 1693 1608 1693 0.93 3 3 2.1 6.1e+03 -2.0 0.0 49 65 1707 1721 1701 1744 0.74
Sequence Information
- Coding Sequence
- ATGTCGTCCTCGAACGGTTCGTCGGACACGAAAAAACGTAAGCTGCCGCCGAACAACGAGGATGCCATTCTCGAATCGAGTACAAAAAAaaTCAAAGTACAAGCTCAGCGTAAATTTGCCCAAAATGCTGTGACGCCCACTAGCACCCTGCAGAAATCTATTCAGACTCCGCTGGTGCCTAACATTGTGCCAGTAAAACCACCGATAAAACGCCCAAACACCGAGGACTTTCTTACCTTTCTTTGTTTTAGaggtacaagTTTGTTACCACCGcggttagatttttttaataagccTCAGCGCTCTCTATCAGCACAAGAAATTGCTGCTGGAAAGaaaCGAAGAAAGAGTACTCCTATACTGCCAGTGTCTAGTACAAATAATGGTGCAAATACTGTAAATAATGAACTGACCATAAGAAAAAGCATTAGATCATCATCATTACTATTACCACAGTCCAAATACTCATTGACTAAACTAGGACAAAAAGTTATTGGTCGAAATCTAGTGAGATCCAGTTCGAGATATACTGCCAGACAAGAAGCTCTTACCCTGCGTCAATTAGCTCTTCACCACGgttcgaaaataaaaccaaagCCAAAAGTTAACAagCCTCCTGTTAAAGAAgaagtgaaaaaagaaataaaaaagaacgaaaaacaaGTGTCATTGGACGGTAAGCAAATACAGCAGTTGAAAGGACGTATAACTCGATCAAATTCTTTACCAAGTGTATTTTGTCCTGTGATAAATCAACTTCGagATGACAAAGGCAAATGGTGTAAGGGAGGAAATAAACCTTCTTCAAAAACATCTGAAGATTCAAAAGATGTTGAAGAAGAAAGACCATCGAGAAGGAAGACTGCATCAAAAATTGTTGACCATAGAAGTAATAGTCTTGGCAACATAAAACGGATGACTAGTGACATTAAATGTaaagaaacaaacaaaaatgataGAAAAACTAGGAGTTTGGCCAGTAAATATAAGAACAGTGATCAAGACAATTACATTGTTCCTGATAAGAAGAGCAATAAGAATTCAAAGGATATATTatctaagaataataataaagcaaaCAGTGTAATCGAAACAAAATTAACAGTTGATGTGAAGAGAAGAACGTCTTCAGtggataatgtaaaattaagtCGTGAGAATAAAGATATAATCAGTTCATCAACTCGTTCGAGGCCTCCGAGAAGAACTAAAGTAGCTGCAACTATATTTATGGAAATGTTACGAAAAGACATGCGGTGTTCAGATGAACAGGAAGATGATTCGTCGTCATTAGAAAGTTTTCCTGACCTCCCCAACACACGAATACATGAACAACGTGAACGTGAATTGAAAGTGTTTTCCAAGAagaacaaaattgaaaaacaacagGATGAACAACAGCAGTCGACAGAAAATAAAGACAATAAGTTATCATCATCAGTAATATCTGATAATAAAAAGACTGTCgtggggaaaaagaaaatggtagcagttaaagagaaaaaaatggatGAGGGGATGAAAAcggtggaaaagaaaaaaccaccAAAAGAAGTGGCTGAAACTATTCCCATACACGATGAAAACTGCGGGACGACtcgatttaaaagaaatctgAGACCTCGCCGTTCATCTACAATGTTGgatgattatattatgactGATTCCGATGAGGATGAAGGTAGATTGGAAGAGAAGCCTTCCATTGCCgtggaaacgaaaaaatgcgGCGAAACGGCTTCTAAACTGCCGTTATCCACAACAAAAACAGTGGGCGGCTCAAAGTctcaaaaatgtaaattaagtAGTACTGAAGAATCTACTAAAAAgaatcttaaaataaataagactgacatgaaactaaaaaaagatttgaataAAATGGATTCTGAAGTAAAAAAGAGTCTTTCTGAAACTAAgtcaaaaagtattttattaataaagcaTGACAAAGAGCCTGAAATCAAGAATAACAAAACATGCACTGTTGCTGACAAGAAAACTGTGAAATTATCAAAACATAAGACTGAAAATTTAGCGATTACTAAGGAagcaaataacaaaattaccgGTGATGGTTCTAAGAACGCCGGGAAAAAAGTGCCAcccattaataacaataacaacagtaATAGTAGTAGAAGTAGTAGTAttagcagtagtagtagtagtagtagtagtaatagtagtagcactactactaataataataataaacagcagcagcagctatCGAAAAAGGAGAACACgttgaagaataaaaaatcaaacttGGACttgtacaacaataataataacaaaatgttatCATCATCCATTGCTTCATCATCTTCCTCCATATTCACTAGCGGCATCGATAGTCAAACAACAAGAAAAGAACTTTTAGAGCATATGGCTGCTAATTTTGATCCCAAATCCCCCTCTATCACCACCACTGCCATAGTAGAGGATGGTGGAAAAGCTGCAGTTAATGTAGACGGActagtgaaagaaaaaaacagtatcGTTGAAGAAAGTGCTGCTGTTGAGAAAAATTTGATAGCAGATGATAACAAGAAATCAATATCTACTAATGACAAACAGGAGTTTAAAATAGTCTCGAAAATGGAAAATGTCATGATAGCAGAGGAAAAAGAGAAGGTCGTCGCTGTTATGGACAAAGTGGCAAAAACCGAGTCGCTGGTGGTACCATTCGACAAGGTAGAAAAAGTCGAAAACATGGTGTTTCAAACTATAGCTAAAGACTTATTCTTGAGTGGCCAGCAAAAAGAGATCAAAATTACCATGCCCGAATACTTGTCCAGCAACAGCTTCCAGCTGCCTAATAGGTTTAAACAACATGATGGTCTGTCTGTGCTGTCTGAGATCTGCAGTGCCTTGCCTAGATTCAACGAGCCATTCCTATCAAACAGACAGTTGTTGAACAACAAGTTATCGACAGCCATTGAGAGTAGCTTCGTGAAGTATGAACAACCGTCATTGTTACCATCACCACCATTGACGTTGATAACTACCATTACCACTACTACCACCACAACTGTCACGACCACCATTgacaagaagaagaaagaaGACAAACCATCATCAGTTATGGCAGTTGTACCTCCTCCTCCGCTGCTGCCACCATCGTTCGAAAGTCGTACTGTGAAAATTATGAACTTAGCTCGGGGTGGCTGCAACAACACTGCTGTTACCAATACTGTTGGTGGGGGtacattaaataatgataagaGGGATTTGACTACGTCGTGGAGACAGGCattcaaaaatgttaagtTACCGAAAAATGGATTGACTTCTGCAACTGTTTCTGTTGGTAATAATTTGATCAGTTGGACGAAAAAGAATCAATCAAATAACGTTCAATTGCCAAAAACCAAAACCACTTGCATCGACGATTTGGCTGCCAAGACCACCACTTCTATACCGTTGCAATCATCTTCGCTACTGCAAGTCAATGACGTTACTACAGATAAGAAAACGATATCCAAAACACATTCTCGTTTATGCAAAAAAACTTGTTGCGAATTGAAAACTATGACTACCGTCAATGCTGCTGCATCATATTTAGCCAAGACAACCATACTGAACAGTacgaaatacgatttgaaatttgaaaaacgttccTCAGCCATGGCATCATCTGTTGGCGTTGAAAGACAACAACACCAACAGCGCAAGGACGCGATTGGCGATGTGTCATCCTTGGACGATCAAAATTCGGAAAAGAAGATCTTTCACCAGCGACGTCTGTCTACCAATCAGTCATGTAGCGGAAACAGTTCAGATGCATTCTCACCCGATAATGAGACAAGCGTTTATGCTTTCCAGCCCGATTTGCCTGTGACTAGTACCCCTTTTCGCCGTAATAAACCTCAATCGCCCGCTAAGTCCAGGACCGTTTCGCCCAACACATCAATCGCTGTGAGCATTGAAAATGATTCGATGGAGGAAAAATCTCATCAGTCTGCCGTGTCTTCGTCGACAGACGTGGACAGTGAGGAAGGACGATTATTCTACATTCCTTTGCCGGCTGGCGTCCAGGCCCAACCATTGATTCAGGGCGTCACCGTCAAACTTGGTACAGAAGGGCCGCAAAACAAATTAGTGATGAGTGCCAAACTGGTAACCAAACCCCCTGCATCCACGATACCAGTCAGTTCCATATCACCAAAGCTTGAACGGAAAATCAAACCACTGTGCACAACTAAAATCACCAACAGCACGACTCCTGTCGGTACCGTGCAGCCGACTACTCGAAGTGTTCAGCCTCCTAAGTGTACACCTTCTACATCAAATCAAGAGTTACCATTGCTATCAGAACTGCATGTTCCGGAAACTAAAGACGAAAAGAAACGTTTACAGCAAATAACTTCCACAACTactgctactactactaatattactactactactaatacaACTACTGCCATTAGTACCACTAGTACAGCTAAGGAATCGAAAAAgtcgttaatattatcatcgacGTTTTCCACGCCCAATTCAGACAATAAGAAATCTAAAAAgACTGAAAAACAAGTTGTTGTCAACAAGAGGAAGTGCACTGAGAAAGTggcttcaaaaaaaaaattcttaaaagcATGTGCCGATATGTTGGATGCACCTACTTTTTATCCGTCCGAGGAAGACTTTAAAGACCCattagaatattttgaaatcattAAGCCGGTCGCCCAAAGATATGGTATATGCAGAGTGGTGCCACCACCCAGTTTTAAGCCGGATTGCAAAGTTACTGACGACATGCGGTTTACGGCATACAATCAGTATGTGCACAAAATGATGAACCGTTGGGGCCCGAATGTTCGAGAAATGATGGCCATGAAAAAGTATCTAGAAACGCAGTCAATAGTTTTGTCTAATCCACCACTCATTGGCGGCATGGAAGTGGACTTGCCTCGATTATACCATACAGTCCAAGATCTTGGCGGTCTTAAGGAAGTAATCGAGATGGACAAATGGTGTCGTGTTGCCGATCTTATGAAGATACCAAAAAGTGCTCAAGACCGCGTCACAAAACTTGACGATATTTATTGCAAGTATTTGTTGCCATATGATACACTTTCGCATGAGGAAAGGCAAAAGTTAATCTCCGAAGTAGAAAAGGAATGGAAACAGATCTGTAAGAAAGGTGACATAGAAAATGAACTGTATGAAGACATTAACGATTGCATAACAAAgGGGCGGAGTATTGCATTGAGTGCTTATTATCGGGTGGCACGCAACACCGTCGCTATGTGGTTCCGAGatcaacagcaacagcaacaacatGTGCCCCAAGGTGGCCATCTGTTGACGTCCAACAAATTGAGTGCAGTTTCTTTACGAGCAGAAGACGTTGAATCACTATATTGGAAGCAAGTACAGGATAGAAAGAATCACATATGCGTGTTGTCTGGGTCAATAGACTCTGGCGCCGAGGGTTATGGGTTCCCTATAACCAAGACTGCCACGTTCACTAAACACCCGTGGAATCTAAAGGTGTTGACCAACAACTCTGTGTCGGTGCTCAAGTCCTTAGGTCCAGTTATGGGCATGACTGTGCCCACCATACACATGGGCATGGTGTTTTCAGCGTGCTGTTGGTACAAGGATCCACACGGGCTACCATGGATTGAGTATTTGCATACGGGGGCTGACAAAGTGTGGTATGGTGTGCCATCTGATCAGAACGACAAGTTCCGTGCAGCTATGAAACGGCTGTTACCGCGCGCTGTAGCTGAGGGTAAAAACCATCATACTTGGTTAGCTGCCGATAGTGGTATGGTGCCACCTGAGAAGCTACTGGAGCATGGTGTTACACTTACTCGGACCGTACAAAACCCTGGTCAGTTTTTGATTGTCATGCCGCGGGCTTACACTTGCAATGTGTCCACTGGTTATGTCATATCTGAAAGTGTTTATTTCACACAGCGTGGTTGGATCAATGATGCAGAGAAAATTTTCCAAGATTTGCAAAGAAACTGTGAACCAGCTGCTTTCTCATTTGAAAAGTTGCTGATAAACATGTCCACAGACTCCCGTACGCCACAACACTTACTGAAACAGcTACTCAACATATTGAGCAATATGAGAGACTGTGAAATAGCGCTTAGAAGTCAGCTGGTAGAGGATTTGGGCTTGAAGGCATCTGAACGCATTCGATCCAAGACATCCAAGTCAAACGAACAAAATGAAGACTATGAGTGTGATGTGTGCCATTCAATTCTTTACATATCAATGGTGAATAACTCGCAGGAAGACTGCTATTATTGTCTGAGACACGGCATCGAGATTTTGTCAAAGAAACACAATCAACTCAAATACTGCAAGTTTTTGTACACTTTTGACGAGAACGAGTTGGATTCGATATTGGTGAAACTGCGTGAAAGGATTgttttgaagaaaaagaaacagtCTATCAAAAGTTGA
- Protein Sequence
- MSSSNGSSDTKKRKLPPNNEDAILESSTKKIKVQAQRKFAQNAVTPTSTLQKSIQTPLVPNIVPVKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEIAAGKKRRKSTPILPVSSTNNGANTVNNELTIRKSIRSSSLLLPQSKYSLTKLGQKVIGRNLVRSSSRYTARQEALTLRQLALHHGSKIKPKPKVNKPPVKEEVKKEIKKNEKQVSLDGKQIQQLKGRITRSNSLPSVFCPVINQLRDDKGKWCKGGNKPSSKTSEDSKDVEEERPSRRKTASKIVDHRSNSLGNIKRMTSDIKCKETNKNDRKTRSLASKYKNSDQDNYIVPDKKSNKNSKDILSKNNNKANSVIETKLTVDVKRRTSSVDNVKLSRENKDIISSSTRSRPPRRTKVAATIFMEMLRKDMRCSDEQEDDSSSLESFPDLPNTRIHEQRERELKVFSKKNKIEKQQDEQQQSTENKDNKLSSSVISDNKKTVVGKKKMVAVKEKKMDEGMKTVEKKKPPKEVAETIPIHDENCGTTRFKRNLRPRRSSTMLDDYIMTDSDEDEGRLEEKPSIAVETKKCGETASKLPLSTTKTVGGSKSQKCKLSSTEESTKKNLKINKTDMKLKKDLNKMDSEVKKSLSETKSKSILLIKHDKEPEIKNNKTCTVADKKTVKLSKHKTENLAITKEANNKITGDGSKNAGKKVPPINNNNNSNSSRSSSISSSSSSSSSNSSSTTTNNNNKQQQQLSKKENTLKNKKSNLDLYNNNNNKMLSSSIASSSSSIFTSGIDSQTTRKELLEHMAANFDPKSPSITTTAIVEDGGKAAVNVDGLVKEKNSIVEESAAVEKNLIADDNKKSISTNDKQEFKIVSKMENVMIAEEKEKVVAVMDKVAKTESLVVPFDKVEKVENMVFQTIAKDLFLSGQQKEIKITMPEYLSSNSFQLPNRFKQHDGLSVLSEICSALPRFNEPFLSNRQLLNNKLSTAIESSFVKYEQPSLLPSPPLTLITTITTTTTTTVTTTIDKKKKEDKPSSVMAVVPPPPLLPPSFESRTVKIMNLARGGCNNTAVTNTVGGGTLNNDKRDLTTSWRQAFKNVKLPKNGLTSATVSVGNNLISWTKKNQSNNVQLPKTKTTCIDDLAAKTTTSIPLQSSSLLQVNDVTTDKKTISKTHSRLCKKTCCELKTMTTVNAAASYLAKTTILNSTKYDLKFEKRSSAMASSVGVERQQHQQRKDAIGDVSSLDDQNSEKKIFHQRRLSTNQSCSGNSSDAFSPDNETSVYAFQPDLPVTSTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHQSAVSSSTDVDSEEGRLFYIPLPAGVQAQPLIQGVTVKLGTEGPQNKLVMSAKLVTKPPASTIPVSSISPKLERKIKPLCTTKITNSTTPVGTVQPTTRSVQPPKCTPSTSNQELPLLSELHVPETKDEKKRLQQITSTTTATTTNITTTTNTTTAISTTSTAKESKKSLILSSTFSTPNSDNKKSKKTEKQVVVNKRKCTEKVASKKKFLKACADMLDAPTFYPSEEDFKDPLEYFEIIKPVAQRYGICRVVPPPSFKPDCKVTDDMRFTAYNQYVHKMMNRWGPNVREMMAMKKYLETQSIVLSNPPLIGGMEVDLPRLYHTVQDLGGLKEVIEMDKWCRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHEERQKLISEVEKEWKQICKKGDIENELYEDINDCITKGRSIALSAYYRVARNTVAMWFRDQQQQQQHVPQGGHLLTSNKLSAVSLRAEDVESLYWKQVQDRKNHICVLSGSIDSGAEGYGFPITKTATFTKHPWNLKVLTNNSVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSDQNDKFRAAMKRLLPRAVAEGKNHHTWLAADSGMVPPEKLLEHGVTLTRTVQNPGQFLIVMPRAYTCNVSTGYVISESVYFTQRGWINDAEKIFQDLQRNCEPAAFSFEKLLINMSTDSRTPQHLLKQLLNILSNMRDCEIALRSQLVEDLGLKASERIRSKTSKSNEQNEDYECDVCHSILYISMVNNSQEDCYYCLRHGIEILSKKHNQLKYCKFLYTFDENELDSILVKLRERIVLKKKKQSIKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -