Caur001685.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- RTase
- Assembly
- GCA_949128085.1
- Location
- OX421882.1:4053087-4072256[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 5.4e-05 0.0099 17.9 1.9 1 23 1120 1143 1120 1143 0.96 2 8 0.73 1.3e+02 4.9 3.4 8 23 1151 1166 1150 1166 0.94 3 8 0.00057 0.11 14.6 0.3 1 23 1229 1252 1229 1252 0.95 4 8 0.066 12 8.1 0.8 5 23 1321 1340 1320 1340 0.93 5 8 7.2e-05 0.013 17.5 3.0 1 23 1575 1598 1575 1598 0.96 6 8 1.8 3.2e+02 3.7 3.5 4 23 1607 1626 1607 1626 0.95 7 8 3.1 5.6e+02 2.9 0.6 1 13 1635 1647 1635 1657 0.74 8 8 2.3e-06 0.00042 22.2 0.3 1 23 1663 1685 1663 1685 0.98
Sequence Information
- Coding Sequence
- ATGGAGAACCTAGCAGCATTTAAAAAACCTTTTCCCAAAGTTGTTAAGCAGggaaaaaatccaaaaggaGATGTACCAAAGGTGGAGACGCCTGGTACATCAGACTTAACAAAAAAGACCACCTTGAGGGTAGGCTCAGTCGAGGACATTGACCTAATGTCCGACGACGAAATCCGAACAGCAAGACTGTCGGGTATTTCTAGGGCCAAAGTGCAAAAGCTGGTGAAGCAAGGTCAAGATTACGTCCAGGCTCGAAGAGCCGTAATCAAAGACAACTTCATCCGGCACGCGCAAAAAGGCCAGGATGGCGCCACCAAGGCACAACCAAAAGCCAAAAAGGCAACCAAGCCCGCAGAGCCAGGAAAGGTTAAGCGGACGGGTACAACACGGGTGGCATCCGAAAAACGACCACGGTCGGAAGGTAACACTCCACCCAATGTACCGAAGAGCAAAAAACCCAAAACTGATGGATTATCCTTCAGAGAGGCAGCCTCTTCGGTTAAAGTCGCGATAGTCAGCGATGGCTATCCAGCTAACCGCTTGGAGCCGGACCAGCTTACAGCTGTCCAAGACTCCTTGCTGGCAGCTTATGACGACATCCCAGAACAAGGACCCCAAGTCCGGTTCGTGAGGTGCACACACAGACCAGGTCACCTTATCGTGATCTGTGCTGATCAGGACAGCGTGCAGTGGCTCAAGGAAGTAGTTCCAACGCTCAGGCCTTGGGAGGGAGCAACTCTCAAGGCTCTGGAAGGCAAGGACATTCCAAGGCCGTGGATCTGCACAACGTTTGTACCTGACGAGAAAGGTAAAAAAGTACCGGCGGAGAAGATCCTAAGCCGTCTAAAGGTGGGAAATCGACGCCTTAACACAAGCCTTTGGACCGTTTGGAATTCCAACAAAGGAGACAAAGGCACATTGTGGACTTTCTCTGCAGATAAAGAGTCAGCAGAGGAATTAAAGAAACTGGACCTACAGCCGTACTTTGGCCTAGGAAAACTTAAATTCCGGGTCAAAGAAGGGCAGTCTGGAGTAGAGCAGACAGGCGAGGGAGACGCCACCTGCTCCAACGCGCCGACGGACCCCCAAGGTATTGCGCCCACGGGAACGGAAGCGGCAATGGACGCTGCCCCTCCGGAGAGCCAGTCTCCCGAAAGCGGAGTTAGTCCCCTCAGACGGCACCTTGCCACGAGGGTGGCTGCTCCAATGGAGGTCCTGCAGGCGAACCTCCAGCATGCAAAAGCTGCGTCAGCAACGCTTGTTAGGAGGTTCGACAACGAAAGTCTGGATGTGGCACTACTGCAGGAACCATGGCTAATAAAAGGAAAACCTGCAGGTTTAACACCACAGCAAGGTAAAGTATTATACAACCCTAGGTCCTTGAGGCCAAGAGCATGCATAGTACACAGCACGAGGGTTACTTGTACACTAATCCCGGTGCTTTGCACCGACGATGTGACTACAGGAATCCTTATGGCCAAGACGGAGGAAGGAACCAGAAGGTGGATCATCTGCTCGGCCTACTTCCCCGGCGAGGACAAGGAGTGCCCACCACCCATAATAAGTAGGATAGCTGCATATGGAGAGGAAAAGGGCCTCCAGGTGATAATAGGGAGCGACGCAAACGCTCACCATATAGCATGGGGGAGCACCAACACCAACGCACGAGGCACGGAGCCAACGTTCGTCACAAGATCCAGAGCGGAAGTGCTAGATGTTACGCTATGCTCAAGTAGGATGATTGACGCCATAAAGGAATGGCATGTGTCGGAGGAACCATCGTGTTCGGACCATCGACACATAAGATTTGACCTGAATGTTACTCTCACCGAGGTCAAGTACAGAAATCCAAGGGAGACAAACTGGCAAGGATATGTGATATCCCTCAGGGAGTCTCTCGAAGGAGGTACGGCACCGGTGAGAGAAATAGAAGGGCTAGAACTAGCGGCAGACCAAGTGCATGACGCCATTATGGCAGCATACACGGAAAACTGCCCAGAGAAAACAAGACGCTATAAGGGCGCCAAAACAGCGTGGTGGAACAAGAACTTAGAGAATTTGAGGGCCGAGGTTCGTAGGCTGTTCAACAAAGCCAAGTCCGACCACAGCTGGGACACCTATAAAAGTAAACTGACACAGTACAACAAAGAAATCCGCAAGGCAAAAAGGGACTCATGGAGGAAGTTTTGCGAGGAGCTGAACGAAGCTCCCGCTTGTTCACGAATCCATAAAGTTCTAGCCAAGGACGGTTGTGCTGCGACCGAGGTGGGCTTCATTAAAAGAATGGATGGAACCCACACAAGCACTCATAAAGAGAGCGTTGAGGAACTGTTAAAGGTTCACTTCCCGTCCGCAAAAATCCTGACTGGTGCTCGTGGGCCGGCCGTAGCAGATCATACGCCAGAGAGGCCAAAAAAACAAGACTGGAGGCTGGCCGCAGAAATCACGAGACCCACGAGAGTCAAGTGGGCGCTAAGCAGATTTTCGCCTTTCAAATCTGCAGGCACGGATGGAATATTCCCTGCCCTACTTCAGAACGGGATAGAGGTACTGATGCCACATCTCGTGAAAATATTCAAAGCTTGTTTAGCCTGGGGATACGTCCCAACTGCATGGCAAAAGGTGAAGGTGGTATACCTACCTAAGGTAGGCAAAGTATCCGACCAAACGCCAAAGTCATACAGACCAATAAGCCTATCCTCCTTTTTACTCAAAACTCTTGAAAGGTTGGTGGATAGGTATATAAGAGACACCGCACTGAGAGAACAGCCACTCAGTGACAGACAATACGCTTACCAACCGGGAAAGTCTACAGAGGTCGCTTTGGACGACCTCAACAGGCTAATTACTAAGTCTATAGAAGACAAAGAGATAGCCATGACGACTTTCCTGGACATCGAGGGAGCATTTAACAATGCCACCACTAACTCGCTCATTGGGGCATTGCGGAGAAGGGGTGTCGCGCCGAGGCTTCTACAGTGGGTAAGAGCCAGcctggaaagaaggataatCACATCCACAATTGGCGAGGCTACCATTGAGGCAGAGGCAGGAGGGggatgcccgcagggtggagttctCTCTCCCCTGCTGTGGGCTACCCTGGTAGACGACCTAATCCGGAAGCTGACCGGCAAGGGATTCCATTGCCTTGgctatgctgacgaccttacaatagtcgtcagagggcgGTTTATACCATCATGCGTCAAAAGCGAAGATATAGAAGAGGGTTCCTATGTCATAATACCACTAGATATTGAACAAGGAAATTCGCGACAATACAATAATAAGGTAACGCCACTATGTGTTACGATGGATCGTCACGAAGACAAAATACATCCTTTTAATGCAGCGTACACTTGTGAAGTGTGCGGGAGGACTTGCAAGACCAAAACAAGCTACGCTAAACATATAAAAGCTGGTCATGAAAAGGGTAAAAGGAAAAGCCAACGCTTTTCCGATAAGCACTACTTGTCCAAACATAGAAGAAAACATATGAAAGGTGGCCAGCATAAgtttatCCCATCATGCGTCAAAAGCGAGGATATAGAAGAGGGTCCCTACGTCATAATACCACTACATATTGAACAAGAAAATCCGCGACAACACAATATTAATGTAACGCCACTATGTGTTAAGATGGATCGTTACGAAGACAAAGTCAATCCTTTTAATGCAGCGTACACTTGCCAAGTGTGTGGGAGGAGTTCCAAAACCAAAACAAGCTACGTCGAGCATATACAAGCTGGCCATGAAAAGGGTAAAATCTACAAATGCAAATGTTGCAGCAAACAGTTTTCCGATAAGCACTACTTGTTTGTACCATCATGCGTCAAAAGCGAGGATATAGAAGAGAGTCCGTGTACCATAATATCATCAgatattaaacaagaaaattcgcAACGACACAATGAGAAGGCAATGCCACTGTCAAGTGCAACATCGCACACCGGTAAAGTATGCGGAAAGACTTGCAAGACCGAAACACGCtacaacaaacatataaaagcCGGTCACGAAGATGGTAAAATCTACAAACGCAAATATTGCAGCGTGCACTTCTCCAGTAAGAAATGCCAACCCATACATGAAACAATGCACACAAAAAGTACTGGTATAGGACGGTTTGTACCATCATACGTCAAAAGCGAGGATATAGAAGAATATGCCATAGTACCATCAGATGTTAAACACGAAATGCCACTATGTGTTAAGGAAGAGCTGCGGGATCTGCAAGAGGAAAACACGATAGCGTTAAGTGCAACATACTTATCCATACATGGAACAAAGCACACAAAAAGTAGTGGTATAGGATCGTTTATACCATCATGCGTCAAACGCGAGGATATAGAAGAGGGTCCGTTTGCCATAATACCATCAGAtgttaaacaagaaaattcgcAGCGACACGATGAGAAGGCGATGCCACTATGTGTTAAGGAGGAGCTGCGAGATGTGCAAGAAGAGAAAACGGTAGCGCTAAGTACAACATACTTACCCATACATGGAACAAAGCACACAAAAAGTGGTGGTATAGGACGGTTTATATCATCATGCATCAAAAGCGAGGATATAGAAGAGGGTCCGTATGCTATAATACCATTAgatattaaacaagaaaattcgcAGCAACACAATGGGAAGGCAGCGCGACTGTGTGTTAAAGAAGAGCTGTGCGATCGTGATGAGGAGAAAATGGTAGCTCTAAATGCAGCAGGGTACACTTGTAAATTATGCGGAAAGAATTGCAAGACCAAAGCAAGCTACAACAAACACATAAAGGCCGGTCACGAAGATGGTAAAATCTATAAACGCAAATATTGCAGCAAGCATTTCTCCAGTAAGAAATGCCTACCCATACATGCAAGAAAGCACACGAAAAGTGGTAGTATAGGACGGCATAAGTGCGATGCATGCGAGAAATCTTTCGTTTCATTCCTGTCGTCGGATGCGCATGAACGCATACATACCGGAGAGAAGCCTTTCATTTGTGCTATTTGCGGAAAAGCTTTTTCAATCAACAGATCGCTTCGGTTACATATGCgaacacacacgaaagaaaagtcTCACATACATTTTCAGCAGGTTGAGaacctagattag
- Protein Sequence
- MENLAAFKKPFPKVVKQGKNPKGDVPKVETPGTSDLTKKTTLRVGSVEDIDLMSDDEIRTARLSGISRAKVQKLVKQGQDYVQARRAVIKDNFIRHAQKGQDGATKAQPKAKKATKPAEPGKVKRTGTTRVASEKRPRSEGNTPPNVPKSKKPKTDGLSFREAASSVKVAIVSDGYPANRLEPDQLTAVQDSLLAAYDDIPEQGPQVRFVRCTHRPGHLIVICADQDSVQWLKEVVPTLRPWEGATLKALEGKDIPRPWICTTFVPDEKGKKVPAEKILSRLKVGNRRLNTSLWTVWNSNKGDKGTLWTFSADKESAEELKKLDLQPYFGLGKLKFRVKEGQSGVEQTGEGDATCSNAPTDPQGIAPTGTEAAMDAAPPESQSPESGVSPLRRHLATRVAAPMEVLQANLQHAKAASATLVRRFDNESLDVALLQEPWLIKGKPAGLTPQQGKVLYNPRSLRPRACIVHSTRVTCTLIPVLCTDDVTTGILMAKTEEGTRRWIICSAYFPGEDKECPPPIISRIAAYGEEKGLQVIIGSDANAHHIAWGSTNTNARGTEPTFVTRSRAEVLDVTLCSSRMIDAIKEWHVSEEPSCSDHRHIRFDLNVTLTEVKYRNPRETNWQGYVISLRESLEGGTAPVREIEGLELAADQVHDAIMAAYTENCPEKTRRYKGAKTAWWNKNLENLRAEVRRLFNKAKSDHSWDTYKSKLTQYNKEIRKAKRDSWRKFCEELNEAPACSRIHKVLAKDGCAATEVGFIKRMDGTHTSTHKESVEELLKVHFPSAKILTGARGPAVADHTPERPKKQDWRLAAEITRPTRVKWALSRFSPFKSAGTDGIFPALLQNGIEVLMPHLVKIFKACLAWGYVPTAWQKVKVVYLPKVGKVSDQTPKSYRPISLSSFLLKTLERLVDRYIRDTALREQPLSDRQYAYQPGKSTEVALDDLNRLITKSIEDKEIAMTTFLDIEGAFNNATTNSLIGALRRRGVAPRLLQWVRASLERRIITSTIGEATIEAEAGGGCPQGGVLSPLLWATLVDDLIRKLTGKGFHCLGYADDLTIVVRGRFIPSCVKSEDIEEGSYVIIPLDIEQGNSRQYNNKVTPLCVTMDRHEDKIHPFNAAYTCEVCGRTCKTKTSYAKHIKAGHEKGKRKSQRFSDKHYLSKHRRKHMKGGQHKFIPSCVKSEDIEEGPYVIIPLHIEQENPRQHNINVTPLCVKMDRYEDKVNPFNAAYTCQVCGRSSKTKTSYVEHIQAGHEKGKIYKCKCCSKQFSDKHYLFVPSCVKSEDIEESPCTIISSDIKQENSQRHNEKAMPLSSATSHTGKVCGKTCKTETRYNKHIKAGHEDGKIYKRKYCSVHFSSKKCQPIHETMHTKSTGIGRFVPSYVKSEDIEEYAIVPSDVKHEMPLCVKEELRDLQEENTIALSATYLSIHGTKHTKSSGIGSFIPSCVKREDIEEGPFAIIPSDVKQENSQRHDEKAMPLCVKEELRDVQEEKTVALSTTYLPIHGTKHTKSGGIGRFISSCIKSEDIEEGPYAIIPLDIKQENSQQHNGKAARLCVKEELCDRDEEKMVALNAAGYTCKLCGKNCKTKASYNKHIKAGHEDGKIYKRKYCSKHFSSKKCLPIHARKHTKSGSIGRHKCDACEKSFVSFLSSDAHERIHTGEKPFICAICGKAFSINRSLRLHMRTHTKEKSHIHFQQVENLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -