Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421883.1:60808510-60810962[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.18 33 6.8 2.1 3 23 121 142 120 142 0.96

2 10 0.71 1.3e+02 4.9 1.2 1 23 153 176 153 176 0.95

3 10 0.00068 0.12 14.4 0.2 1 20 332 351 332 355 0.93

4 10 1.7 3.1e+02 3.7 1.2 1 17 362 378 362 385 0.71

5 10 6.3e-05 0.011 17.7 1.8 1 23 391 413 391 413 0.97

6 10 6.3e-06 0.0012 20.8 0.3 1 23 423 446 423 446 0.93

7 10 0.00016 0.029 16.4 1.2 1 23 452 474 452 474 0.95

8 10 0.15 27 7.0 3.6 1 23 480 502 480 502 0.97

9 10 0.016 2.9 10.1 5.2 1 23 508 531 508 531 0.97

10 10 0.048 8.9 8.6 0.2 1 23 540 563 540 563 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.18	33	6.8	2.1	3	23	121	142	120	142	0.96
2	10	0.71	1.3e+02	4.9	1.2	1	23	153	176	153	176	0.95
3	10	0.00068	0.12	14.4	0.2	1	20	332	351	332	355	0.93
4	10	1.7	3.1e+02	3.7	1.2	1	17	362	378	362	385	0.71
5	10	6.3e-05	0.011	17.7	1.8	1	23	391	413	391	413	0.97
6	10	6.3e-06	0.0012	20.8	0.3	1	23	423	446	423	446	0.93
7	10	0.00016	0.029	16.4	1.2	1	23	452	474	452	474	0.95
8	10	0.15	27	7.0	3.6	1	23	480	502	480	502	0.97
9	10	0.016	2.9	10.1	5.2	1	23	508	531	508	531	0.97
10	10	0.048	8.9	8.6	0.2	1	23	540	563	540	563	0.97

Sequence Information

Coding Sequence: ATGGTTAGTGATAATCAAGCTGTTGATATGAAAACAGATGATAATTGTAATAATGCAGGAAATGTATGGTCGACGAATTCTGATCTACCACCATTAGTCCATGATgAGTGTTTACCAGTTATTAGCAATAATCATGTTTCTTCAATATTATCGCATTTGGAACCATCTGAAAAggttatttcaaataatttagaagTATCTCAGAATATGGAATTTATAGTGCTTCCGAATACGGATTATAAGTTAAACGTTTCGTTTAATTCTATGGTGACAAATAATTATGTTAATGTAAAAAGTCACAACGAGAAGCTGCCGCAAGACATCAAGCCGAAATCATCCCATGATATAAATTATGTGTTTTGCGATTTATGCCCATTTCTATGCACGAATGAAAAAAGACTCACTGACCACATGCGTAACGTTCATGAAAATGGTAATTCGATTAAACTAATCAAGTATAAATGTCCAGCATGtatcaatatattttatcaCAAGTTGTCATTACGATCACATTTACTAAATGATCATTTAGTTAATAGTTCcgatttgaataaaataatgagTGCAGTAGTAAAAAAGAGGGAATCAGATAAATCAGGTTTTAATAAAAGCATATCAAAACATGGCAGTATTACTATTAGctgtaaaaatgaatttgatttgaaatatggggagaaattaacaaaattatctgGTGAAAATATTCTGAATGACGAGAAAGTTCAAAATAATGAGTTAATATCCAATAGTATTTTGCCTTGTACAAACGAAGTAGTTGATAATGGAGTAAATAGCATTATTGTAAATCTCCCAACTGTAGATATTTCACCAAATAACACTGAGAAAATGTTTAataactatattaaaaaaaataattccttaTCTAAGTTTTTGgataaaaaaatacagaaatgtAATGTACCGTTGTGTAAAGTACGATTACAAAACATGGAAAAACTAAATTATCACATTAAATGCCACATGGACAACAGCTTTAAATGCCCAGAATGTAACGAAGTATTCTCATTTTGGAAGCCCTTAACTGGACATCTGTGGAGGTTGCATAAGATCGATATGGAATTATATTCGTGCGATAAGTGCGAGTATAAGACGTTTAGCTTAGGGCATTTAAATAATGTacataaattaatacataacgATACAAAGCcttttgtttgtaatatttgtcTGAGAGGctttaaaaattctaaacaaCTAAGGAATCATAAGAGTTCGCATAGGCAGAAGACCGAAAAAACTTCCACTTTCGTTTGTGATACTTGCACCAAATCATTTTCGGATAGGAGACAATTGCGCATACATATTGATGGTGTACACAAGAAAATTAAGCCATTTCTTTGCAATTTCTGTGGTTATAAAGGCGCAACTAGAAGTTCCCTAAGGATGCATATGCGGCAACATACAGgtgaAAAACCCTTCTCGTGCGATTCTTGTTCTTACACTACAGCTGATCATAATTCCATGAGGAGACATAAATTGCGACATACTGGAGAGAAACCATATAAGTGTATTCATTGTGATTATGCATGCATTCAAAGCAGCACTTACAAAGTCCATTTAAAGACGAAACATCCTGGTTTGGAAAAAGATCTTTTATATTCATGTCCCGATTGTGCTTTTAGGTCAATAAACAAAGACGTATTTAGTACACATTTATTAACAGCtcataaattaaaatcaacatAA
Protein Sequence: MVSDNQAVDMKTDDNCNNAGNVWSTNSDLPPLVHDECLPVISNNHVSSILSHLEPSEKVISNNLEVSQNMEFIVLPNTDYKLNVSFNSMVTNNYVNVKSHNEKLPQDIKPKSSHDINYVFCDLCPFLCTNEKRLTDHMRNVHENGNSIKLIKYKCPACINIFYHKLSLRSHLLNDHLVNSSDLNKIMSAVVKKRESDKSGFNKSISKHGSITISCKNEFDLKYGEKLTKLSGENILNDEKVQNNELISNSILPCTNEVVDNGVNSIIVNLPTVDISPNNTEKMFNNYIKKNNSLSKFLDKKIQKCNVPLCKVRLQNMEKLNYHIKCHMDNSFKCPECNEVFSFWKPLTGHLWRLHKIDMELYSCDKCEYKTFSLGHLNNVHKLIHNDTKPFVCNICLRGFKNSKQLRNHKSSHRQKTEKTSTFVCDTCTKSFSDRRQLRIHIDGVHKKIKPFLCNFCGYKGATRSSLRMHMRQHTGEKPFSCDSCSYTTADHNSMRRHKLRHTGEKPYKCIHCDYACIQSSTYKVHLKTKHPGLEKDLLYSCPDCAFRSINKDVFSTHLLTAHKLKST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -