Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421884.1:65459361-65465932[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0055 1 11.6 0.1 2 22 216 236 215 238 0.88

2 11 8.3 1.5e+03 1.5 5.1 1 23 244 266 244 266 0.84

3 11 0.0083 1.5 11.0 0.3 1 23 300 323 300 323 0.91

4 11 1.6e-06 0.00028 22.7 1.0 2 23 340 361 340 361 0.98

5 11 1.2e-05 0.0021 20.0 1.4 2 23 451 473 450 473 0.95

6 11 0.01 1.9 10.7 5.5 1 23 479 501 479 501 0.99

7 11 0.27 49 6.2 0.0 2 20 506 524 505 526 0.88

8 11 4 7.3e+02 2.5 0.3 3 23 536 556 534 556 0.88

9 11 0.006 1.1 11.4 4.2 1 23 562 584 562 584 0.97

10 11 0.0013 0.24 13.5 1.7 3 20 590 607 589 609 0.93

11 11 1.6e-06 0.00029 22.7 0.6 1 23 615 638 615 638 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0055	1	11.6	0.1	2	22	216	236	215	238	0.88
2	11	8.3	1.5e+03	1.5	5.1	1	23	244	266	244	266	0.84
3	11	0.0083	1.5	11.0	0.3	1	23	300	323	300	323	0.91
4	11	1.6e-06	0.00028	22.7	1.0	2	23	340	361	340	361	0.98
5	11	1.2e-05	0.0021	20.0	1.4	2	23	451	473	450	473	0.95
6	11	0.01	1.9	10.7	5.5	1	23	479	501	479	501	0.99
7	11	0.27	49	6.2	0.0	2	20	506	524	505	526	0.88
8	11	4	7.3e+02	2.5	0.3	3	23	536	556	534	556	0.88
9	11	0.006	1.1	11.4	4.2	1	23	562	584	562	584	0.97
10	11	0.0013	0.24	13.5	1.7	3	20	590	607	589	609	0.93
11	11	1.6e-06	0.00029	22.7	0.6	1	23	615	638	615	638	0.94

Sequence Information

Coding Sequence: atgtattgtatattgGATTTTTGTCATCTCTGTCTGAAAGATGACCAATCGTTGATCGATTTGTCGAAGAGTTTACCGCAAAACGACGCTATCAAAGCGAAATTGGCCGCCTTCGTTTCGGAAGTGCAATGGTCCTCCATAAAACGGTTGCTAATCTGCGTAGCATGCACAGAGAAGCTGGATTGGGTATACGATTTCAAGCAGACCTGCACGAAATCGTACGAGGTCACCATGAAACGCATCGCGACTATAAAAACATCGGAAAACCCACGAAAAGCCCAAATACACGTTCGAGTTCGGAAGGACGCGATCGACTCTAGTATGACGCAAAAATATCTCGAACTTCACGGCCCGAATAGATTTCCCGTCGTTCAAGCGCCGACCGGATTTATTCTATCGAGCGGAGGTCAGGGAGGCTCCTATCAGAACATGTTTTTGAATTTCGTTTCCACGAATAATATGGTGTATCCGATCGTAGTGAACCAACCGGTCGTGATCAACAATCAACCGAACGACGACGACACTATCTTGAAGCAATTATTGGAGGCGAAGAGTTCCGAGGAGCTCAGCGTGGACATAGATCCCGCCCTGTACGATTTCGAGCATTTCCTGACGGCCCCAACGCCAGTTCCGACGCCGAATATCGAATGTACGCAATGCGGAACGGCTTACGTTACGATAAAACTGCTGCGTCGACATTTCGACGAAGTCCACGGCGGGATATTGCCGTTCGTGTGCACGTTCTGCTTCTCGAAGTTCCTACTCAAGGATCACTACGATAAGCACATGAAGAATCATTTGGAGAAAACTGGCGATACCCTCGCGGGATCTACGGTTAATTTGGATAATATATCGAAGGTGCCGCAACAGAGACTGTTAGGAAACGTGCAGGTCGAATACCCGTGCAAATTTTGTTCGGAAACGTACCAATCGGAAGAAACTTTGGAAAAACACGTCGACGAGTTGCACGGAAACGTAATAAACAGAACGGCCTTCTTTAAGGGGATGAAGATGGCCACGTGCGAAATATGCGATCGCGATTTTTCGACCTACGCCTATCTGCAGAAACACATGAAGCGGCACGACGGCGTCGACAAGGACGGACCACAAAAGAAGAAAGCGAAGAAAGATGAAATTGACGACAAGATCGATTTGACCAACGACACCAACGGCCTCAAAGAGAATATAAACGTGCAGTTTGCGAATTGCGTCCGGAAGAAACCGCAGAATAACAACACGGAATCGAATAAAGAGGAAGTGATCGAGGTGAACGATGACAATCCGCCGGAGACGGGCGCGGCCGACTCCGTGTTTAGCGAATTCGCGGTCGAGACCGAAGACGGACGGATATCGTGCAGTTTCTGCAAGAAAACCTACGCGAGAAAGCGGGACCTACGCAGACACATCAATATCTCCCACATGAAGTCCATAGTGTACCAGTGCCACCTGTGCGACGAGAAATTCTACGAAGGCTGCCGACTGACGCGCCATCTACGCTCCCACTACACGCGCGTCAGTTGCGGCGAATGTCGCCGTACGTTCACCAGCATACCGGAAATAACGGGCCACATGATCGACACGTACAACGAACTGAAGGGGATCATCTGCAACGCGTGTTGCGTCAATTTCACGGACGTGGGGCAATTCAAGGCGCACGCCGACACCCACCTGCAGGAGATCGTCTACAAATGCCACCTGTGCGAGGAGAAGTTCGGTGAATGCCGGGATCTGACGAAACACCTCTCCGAACACAACGGACTGAAACATTGCGAACACTGCAGCAAGGTCTTCACTAAGGAGGAGGAATTGGCGAAGCACCGAAGTAATTGCGGCACGGGCAGTTATCAATGCGACGTCTGTCCGAAGGTGTTCAAGAATAAGCGGTACTTAAAACTCCATATCATAGCGAAACATGCCGACGAAATATCAGTCGACGAGCCGCTGAAGAGGAAGCGTAAACTCGACGAGGAGATTTAG
Protein Sequence: MYCILDFCHLCLKDDQSLIDLSKSLPQNDAIKAKLAAFVSEVQWSSIKRLLICVACTEKLDWVYDFKQTCTKSYEVTMKRIATIKTSENPRKAQIHVRVRKDAIDSSMTQKYLELHGPNRFPVVQAPTGFILSSGGQGGSYQNMFLNFVSTNNMVYPIVVNQPVVINNQPNDDDTILKQLLEAKSSEELSVDIDPALYDFEHFLTAPTPVPTPNIECTQCGTAYVTIKLLRRHFDEVHGGILPFVCTFCFSKFLLKDHYDKHMKNHLEKTGDTLAGSTVNLDNISKVPQQRLLGNVQVEYPCKFCSETYQSEETLEKHVDELHGNVINRTAFFKGMKMATCEICDRDFSTYAYLQKHMKRHDGVDKDGPQKKKAKKDEIDDKIDLTNDTNGLKENINVQFANCVRKKPQNNNTESNKEEVIEVNDDNPPETGAADSVFSEFAVETEDGRISCSFCKKTYARKRDLRRHINISHMKSIVYQCHLCDEKFYEGCRLTRHLRSHYTRVSCGECRRTFTSIPEITGHMIDTYNELKGIICNACCVNFTDVGQFKAHADTHLQEIVYKCHLCEEKFGECRDLTKHLSEHNGLKHCEHCSKVFTKEEELAKHRSNCGTGSYQCDVCPKVFKNKRYLKLHIIAKHADEISVDEPLKRKRKLDEEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -