Caur035685.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cetonia aurata
Gene Symbol
-
Assembly
GCA_949128085.1
Location
OX421887.1:37333994-37342084[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.015 2.7 10.2 3.6 3 23 190 211 189 211 0.95
2 22 0.042 7.6 8.8 0.6 1 20 339 358 339 360 0.95
3 22 9 1.7e+03 1.4 1.4 2 23 390 412 389 412 0.93
4 22 2.8 5.1e+02 3.0 0.3 5 19 421 435 418 437 0.93
5 22 1.5 2.7e+02 3.9 1.9 1 19 444 462 444 467 0.95
6 22 0.0001 0.019 17.0 4.7 3 23 537 557 535 557 0.96
7 22 2.8e-06 0.00051 21.9 1.2 2 23 572 593 571 593 0.97
8 22 1.3 2.3e+02 4.1 0.1 2 23 601 623 600 623 0.92
9 22 0.00098 0.18 13.9 0.2 2 23 628 649 628 649 0.96
10 22 0.15 27 7.1 0.0 1 23 671 693 671 693 0.93
11 22 0.0085 1.6 10.9 4.3 1 23 723 745 723 746 0.95
12 22 0.0041 0.74 12.0 0.6 1 23 756 778 756 778 0.98
13 22 1.8e-06 0.00033 22.5 7.0 1 23 810 832 810 832 0.99
14 22 0.2 37 6.6 2.7 3 23 854 874 852 874 0.97
15 22 0.0013 0.24 13.5 0.5 1 23 914 936 914 936 0.98
16 22 0.012 2.2 10.5 0.2 2 23 949 971 948 971 0.93
17 22 0.00087 0.16 14.1 1.2 1 23 988 1010 988 1010 0.93
18 22 0.51 93 5.4 0.3 1 23 1042 1065 1042 1065 0.93
19 22 0.003 0.56 12.4 0.3 2 23 1076 1097 1075 1097 0.96
20 22 0.0018 0.32 13.1 1.9 1 23 1104 1127 1104 1127 0.95
21 22 0.0001 0.018 17.0 1.9 1 23 1135 1157 1135 1157 0.99
22 22 0.00034 0.062 15.4 0.4 1 23 1175 1198 1175 1198 0.98

Sequence Information

Coding Sequence
ATGGGCGAGGAGAGATTTGGAAATTACAGCTCCTGCTGTCGATTGTGCTTGTCGGATAACTTCAATTGTTTGAAGCCGATATTTGAAGACGAGGCAGAAGGTCGTACATTGGTTCAAAGGATCCTGAATTTCCTCGGCGTGGAGgtgTCTGCAAATGATAAAATTTCAACAATGATCTGTACTCAATGCCGATCAAAGGTCAACAATTGGGATAATTTCAAAATCGAATGCAGCAAGAACCAAACCAAATTACAACAATGGTTGAGTAGCTGGATCGATTCGAGCACTGATAATAATATAGGGAATATGACTATCCAAATTAAAGATGAACCGGAGGATAGAGATGAAAGTGTAGAGATTTCACAGCTCGAAGATGCTTCGGATGAGCAAGCCATTACTATTAAGTCAGAACCGAGCGAAGAAGGCATCGAAGAATTCTATGAGCAACCTCCGCACCTAACACCACACACTCAGGAGGGAAACCAGACGCAAGAATATGAAGATCAACCAACTCTGCCGAtcgAGAATGGTGGAGATAGTCTAGTGGGAAGAAAAAGTAGTAAGCATTGCACTTATTGTAATAAGCTTTTTAGCACGTCTGGTAATCGTTCAAAGCATGAACGTCTTTTACATGGAAGAAAGACTGAAGCTGCCATTGGGAAGAGTGTTGGTGCAACAGGAAACCAAGACGACAATTCACAACAATCGTTAGGATCCTACGTCAGTAATCCAAGCGCTATAGACGCAGACGGGGATCAACAAAATCGCGATACCCACATGCAAAAGATCCAATTCGCCGCGGGATTACGCCTCAAACGCAGATCCAACGGCGGTAACTCCGCCCCCTCTACAATCGAGGGTGCTCTGTCGCCGATCGAGTTGGCTTACGTCGAACGCAGCAAAGCCCTCGTCTCGATGTTGCACAAGTTCCGATGCGCCTGCCACAACGTGGCGTTCCCGACTATCAAACGACTATTCGCGCATCTGCGCATGAGCTACACTTGGTTCCCGATATTCACTTGTTACAATTGCGTCATAACCTTCTCTACGCGCTCGTTGAACATGCGACACACCGGCAAATGCCCCAATCCGTATCTGGAGAACAGTCTACGCCTATCGGAGATGAAGAAACGCAGTGAGACGAAGATCAGATTGTACCAGTACAGCAAATGCAACAAATGCGAGAATTTATACGCGTTTTACGAAGATTATTGCGACCACATCGATAAGGAGCACGCGACGGAATCGCCGCACGTCTGCGTTTGCACGAGGAAATTCGAAACGGCCGAGGAATACAAGCAGCACGCCTACGCGTCGTGTTTTTTGAGTTATTACTGCGACGTTTGCTACTCCGTGTTCGATTCGTTGGAGGATTTCCGTTCGCATTGCGAGGATGAACACGACAAGATCGAGGAGTTCGTATTCGTCAATCCCAATCCGAGTTTCGCTTATTGTAATCGGGAGGAGATAATGACTTCGCGCAAGCGAAGTCACGACGAGATGAGTCAAAGCAACAATGAGGGTACGACGGAAAATAACGACGGTCAAAACGATGGGAATGACAGGAAGAAATTTATTCCGAACAGACATTACAGCGAGACGATTAATTGCGATTTATGTGAACGCCGTTTCAGTAATCACCACGCTTTACGCAAACATATGAAAATGCACAGACGTAACAGCATTGCTAATGGGTGGAAGAGTAAACCGTCATCTTGCAGTAAGTGTGGTAAAGTTTTCTCTACGTATTATAACATGATTCGGCATTATAAAGTGCACGATGATGCTGAAAAGCATCTGCAATGCGCTTTGTGTACCGACAAGTTCCGTCTGGTTTCCGAACTGAAGGATCATTTGATTTTAGTGCATGGCAGAGCTAATGTTTGTCAAGAGTGCGGCCGACAGTTCGAATCCGTTAAGGAATTAGAGCAACATAGGAGCGTCCATTTGAACATTAAAGTCTATCGGGATTCCAAGACGCAATCGTATCGCACCGGGACTAGGCCGAGGTATTCTTGCGAATACTGCGACGCCATCTTCGACGCTGAAATCGAATTGAACGAACATTCCGCGATACACGCAACGGAAATGGCGAATAACATCGATCAATCGGACGCTTCGGAGGAACCGCAAGAGAAGAAGGTGAATACGAGCGATTTCGGTCGATTCTCATGCACCGATTGCGACCGCCATTACGTCAGCTACAAAGGATTATGGTTGCATAATCGCAGACACCATCCAGAGCGCAAACCCGCACCGCAGACCTTCGAATGTCAATATTGCGACCGCGTGTTGCAAACCAACGCGGCCTATCAGATGCACAAACAGATGCATGAGAGAATGCAGGAGCGCATGCAGAAACAGCAACAGCAGCACCACCAATCTATCGCGGATTCCAACAAGGGCGACGACGACGAGGAGTCCTATTTTACCTGCAAGCATTGCTTCAAGGTGTTTTCGAATAAGTACAATTTAAAGACTCATTTAAAGACGCACGGAATCTATGTATCGCCGGGTAGGACCTATTCCAAGTCTGGGAAATTCGTGAAGACATTCTGGTGCGATATTTGCCATCAGGCGTGCCAAGGATACTCTGAACTGCAGAAACACAAACAGGAGCACATCAAGGAGAAATTGAAGGTGGCCCACAATCGCCAGCAGACCATACAGAATCAACAAGCCGTGCACCACAACCAGCAGTTCATCGACTTGGACGAGGAAGATGTGAAACCGCAGATTTTCAGCTGCGACATCTGCACGAAAGGGTTCTTATCGAAAGGGCAGTTGATGGCGCATAAGAGCACTCACGATCAAGACACGCGCGGACAAAAGCGGAATTTCGTCTATTGCAAATATTGCAAGACGCCATTCTTGAACGTCAGCGGACTAAATCGGCACATGGAAGAGGAACATAACAAGCTgcaagtacccactacgaacgTAAAGAATCTAACGAAGAAACACGCTTGTAATCTCTGCAAGAAAGTGTTCGATACCGCCGGAGCTCTGTGCTCTCACCAAGGTTGGCATAAACGCGGTAAATCCGAGAAACAATTGAAATCGGACAAGTTACAACAGCAACAGACCTTCCAACGCCCCTCCGCGCAGCAAATCACCGTCAAACACGAATGCAGTTCCTGCAACTTGACGTTCTTGACGGATACGGCGTTGCAAATCCACATACTCGAAGCGCATCGCAACGTCAACGCATCCGTGCTGCCATCTAGGTGTACGATCTGTAATATCGAGTTTAAGACGCAAGCCTCCTACGACGAACACGCTAGATTGCACCGGACCACCTCTACTACTTTCCAATGTAGATATTGCACGAGGAAGTTCAATAAGAGCGAAACGTTTAATATCCACGTGAACGAGGCACATCCCGAGCACGCAGACGCTAAATTCAAGTGTCATCAGTGCGAACGCATCTTCGAGAAGCAAAACGCACTGACGATCCATTTGAAGGTGCACGATCGGCAGCGGTTGACTGGGGCACCGATTAAACAGCCCAAATCACATATATATACCTGCTCGATTTGTCATTTAGGATTTGAGATACCCAAGGATTTACGAAATCATATAATCACCAGCCATCCtttctaa
Protein Sequence
MGEERFGNYSSCCRLCLSDNFNCLKPIFEDEAEGRTLVQRILNFLGVEVSANDKISTMICTQCRSKVNNWDNFKIECSKNQTKLQQWLSSWIDSSTDNNIGNMTIQIKDEPEDRDESVEISQLEDASDEQAITIKSEPSEEGIEEFYEQPPHLTPHTQEGNQTQEYEDQPTLPIENGGDSLVGRKSSKHCTYCNKLFSTSGNRSKHERLLHGRKTEAAIGKSVGATGNQDDNSQQSLGSYVSNPSAIDADGDQQNRDTHMQKIQFAAGLRLKRRSNGGNSAPSTIEGALSPIELAYVERSKALVSMLHKFRCACHNVAFPTIKRLFAHLRMSYTWFPIFTCYNCVITFSTRSLNMRHTGKCPNPYLENSLRLSEMKKRSETKIRLYQYSKCNKCENLYAFYEDYCDHIDKEHATESPHVCVCTRKFETAEEYKQHAYASCFLSYYCDVCYSVFDSLEDFRSHCEDEHDKIEEFVFVNPNPSFAYCNREEIMTSRKRSHDEMSQSNNEGTTENNDGQNDGNDRKKFIPNRHYSETINCDLCERRFSNHHALRKHMKMHRRNSIANGWKSKPSSCSKCGKVFSTYYNMIRHYKVHDDAEKHLQCALCTDKFRLVSELKDHLILVHGRANVCQECGRQFESVKELEQHRSVHLNIKVYRDSKTQSYRTGTRPRYSCEYCDAIFDAEIELNEHSAIHATEMANNIDQSDASEEPQEKKVNTSDFGRFSCTDCDRHYVSYKGLWLHNRRHHPERKPAPQTFECQYCDRVLQTNAAYQMHKQMHERMQERMQKQQQQHHQSIADSNKGDDDEESYFTCKHCFKVFSNKYNLKTHLKTHGIYVSPGRTYSKSGKFVKTFWCDICHQACQGYSELQKHKQEHIKEKLKVAHNRQQTIQNQQAVHHNQQFIDLDEEDVKPQIFSCDICTKGFLSKGQLMAHKSTHDQDTRGQKRNFVYCKYCKTPFLNVSGLNRHMEEEHNKLQVPTTNVKNLTKKHACNLCKKVFDTAGALCSHQGWHKRGKSEKQLKSDKLQQQQTFQRPSAQQITVKHECSSCNLTFLTDTALQIHILEAHRNVNASVLPSRCTICNIEFKTQASYDEHARLHRTTSTTFQCRYCTRKFNKSETFNIHVNEAHPEHADAKFKCHQCERIFEKQNALTIHLKVHDRQRLTGAPIKQPKSHIYTCSICHLGFEIPKDLRNHIITSHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01123995;
90% Identity
-
80% Identity
-