Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421882.1:3907188-3934512[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0009 0.17 14.0 1.4 1 23 107 129 107 129 0.98

2 18 0.55 1e+02 5.3 0.2 1 11 135 145 135 150 0.87

3 18 0.67 1.2e+02 5.0 0.1 1 16 211 226 211 228 0.86

4 18 0.00057 0.1 14.6 0.9 1 23 387 409 387 409 0.98

5 18 0.00083 0.15 14.1 0.2 1 20 496 515 496 517 0.94

6 18 0.00092 0.17 14.0 0.0 2 23 557 578 556 578 0.96

7 18 3.9e-06 0.00072 21.4 0.1 1 23 671 693 671 693 0.98

8 18 0.0063 1.2 11.4 0.2 2 23 719 741 718 741 0.93

9 18 0.004 0.73 12.0 1.5 1 23 762 784 762 784 0.98

10 18 0.0027 0.5 12.5 0.7 1 23 788 810 788 810 0.98

11 18 0.027 5 9.4 0.2 1 23 817 840 817 840 0.97

12 18 0.08 15 7.9 2.2 1 12 846 857 846 868 0.78

13 18 0.00038 0.07 15.2 0.4 3 23 876 897 875 897 0.96

14 18 5.9e-05 0.011 17.7 3.4 2 23 912 933 911 934 0.95

15 18 0.00043 0.078 15.0 1.2 3 23 946 966 944 966 0.95

16 18 2.7e-05 0.0049 18.8 3.5 1 23 972 994 972 994 0.98

17 18 0.0021 0.39 12.8 5.0 3 23 1001 1022 1000 1022 0.90

18 18 0.0016 0.29 13.2 0.4 1 20 1028 1047 1028 1049 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0009	0.17	14.0	1.4	1	23	107	129	107	129	0.98
2	18	0.55	1e+02	5.3	0.2	1	11	135	145	135	150	0.87
3	18	0.67	1.2e+02	5.0	0.1	1	16	211	226	211	228	0.86
4	18	0.00057	0.1	14.6	0.9	1	23	387	409	387	409	0.98
5	18	0.00083	0.15	14.1	0.2	1	20	496	515	496	517	0.94
6	18	0.00092	0.17	14.0	0.0	2	23	557	578	556	578	0.96
7	18	3.9e-06	0.00072	21.4	0.1	1	23	671	693	671	693	0.98
8	18	0.0063	1.2	11.4	0.2	2	23	719	741	718	741	0.93
9	18	0.004	0.73	12.0	1.5	1	23	762	784	762	784	0.98
10	18	0.0027	0.5	12.5	0.7	1	23	788	810	788	810	0.98
11	18	0.027	5	9.4	0.2	1	23	817	840	817	840	0.97
12	18	0.08	15	7.9	2.2	1	12	846	857	846	868	0.78
13	18	0.00038	0.07	15.2	0.4	3	23	876	897	875	897	0.96
14	18	5.9e-05	0.011	17.7	3.4	2	23	912	933	911	934	0.95
15	18	0.00043	0.078	15.0	1.2	3	23	946	966	944	966	0.95
16	18	2.7e-05	0.0049	18.8	3.5	1	23	972	994	972	994	0.98
17	18	0.0021	0.39	12.8	5.0	3	23	1001	1022	1000	1022	0.90
18	18	0.0016	0.29	13.2	0.4	1	20	1028	1047	1028	1049	0.94

Sequence Information

Coding Sequence: ATGCATTTACGTACGCATCCTGGTGCATTAAAGAGAGTCTGGGACGCTAAATCTGTAAAAACTTTGCGAATATCCTCAACgtttatacCAGTATGGGTCAAAAGCGAGCATATAGAAGAAGGTCCCTACATCATAACACCATCACATATTAATCAAGATAATTCGCAAAGACACATTAATAAGGCAAAACCGATATGTGTTAAGAATGAGTTGTGGTATCGTCCTGATGAGAAAATGAAACCTTTTAGTGCGACGTACAATAAGCATTGCTTGCCCATACATAGATCAAGACACGCGAAAGCTGGCGATATAGGACAGCATAAGTGTGATGTATGCGGAAAATATTTGGCTTCACTCCAGTACTTGAATGTGCATAAACGCATGCATACCGGAGAGAAGCCTTTCACATGTGCGATTTGCGAGAAAACCTTTGCAATCAAGGGGTTTCTACCGTCATGGGTCAAAGACGAGGATTTAGAAGAGGGTGCCTATATTGTAACACCAATAGATATTCAACACGAAAATTCCGAACGGCACAGTGTTAAGGCATCGCCGTCATCTACTAGGAACGAGCTGTGGGATCATCATCAGGAGAAAATGAATCCTTTTAATGCCGCCTACAATAAGCAGTATAACTGCGACGTATGCCACAAATCTCTAGCTTCACTCCAGAGTTTGTTTATACCATCATGGATCAAAAACGAGGATATAGAGGAGGGTCCCTATATCATAACACCATTACATATTAACCAACAAAATTTGCAAGGACACGACAACAAAGTAACGTCCATATGTGTTAAGAAGGAGCTATGGGATCATCATGAGAAGAAAATGGAACCTTTTAGTGCAGCGTACAATAAGCAATATTTGTCAATACATAGAACGAAGCACACGAAAAGCGGAGGTATGGGACAGTATAAgtttatacCAGTATGGGTCAAAAGCGAGCATATAGAAGAAGGTCCCTACATCATAACACCATCACATATTAAGCAAGATAATTCGCAAAGACACATTAATAAGGCAACGCCGATGTGTGTTAAGAAAGAGTTGTGGTATCGTCCTGATGGGAAAATGGAACCTTTTAGTGCGACGTACAATAAGCATTGCTTGCCCATACATAGATCCAAGCACACGAAAGCTGGCGGTATAGGACAGCATAAGTGTGATGTATGCGGGAAATCTTTGGCTTCGCTCCAGTACTTGGATGTGCATAAACGCATGCATACCGGAGAGAAGCCTTTCACgtttacACCATTATGGATCAAGTGTGAAGATTTGGAAGAGGATCCCTATATCGTAACGccattacatattaaacaagaaaattcgcAACAACACAGTAATATGGTATCGCCGATATGTGTTAAGATGGAGCAATGGAATGGTcatgaagaaaaaattgaacCTTTTAGTGCATCGTACAGTAAGCAGCACTTGTCCATGCACAGCACAAAATACACGAGAGTTGGTGGAATGGGCCAGCACAAGTGTGATATATGCGGGAAGTCCTTGGCTTCACTGCAGAGCTTGAATgATCATATTTTCAGGATTATACTATCAGATGTCAAAGGCGATGATATAGAAGAGGGGCCCCATATCATAACACCATTACATTTTGAACAAGAAAATGTGCATAACCGCATCCATGCCGGAGAGAAGCCTTTAATTTGTGCCACATGCGAGAGAGGTTTCGCAAACGAAGCAGTGCTTATTAGACACATTCGGACCCACAAGAAAGAAAAGCCttgcatatCGAAGATATGGAAAAGGGTCCCATTACATCATAAAGAAGAAAATTCTCAACGCCACAGTAATATAGTCATGTCACTATGTGTTAAGAAGGACCTATGGGATCGTCATGAGAccaaaataaaatcttttaatgCTGCAACATTGCACACGAAAGGTGGTGAAATAGGACAGCATAAGTGCGATGAGAGCGGGAAATCTTTGGCTTCGTTCAAGTTCTTGGATGTGCATAAACGCATACATACCGAAGAGAAGCTTTTCGTTTGTGCTATTTGCGAGAGAAGTTTCGCAACCAAAGCAGTGCTCCAGAGACACATTCGGATCCACACGAAGGAGAATCCTtacttatTGCAAAAGAAACGTCGCCGTATGAGATGCCGTCGCATGAAGAAATACGCCTGGCCTTGCAAACTCTGCGATATAAAGTTCGAGACCAGGAAACTGCTGGTGGAGCACAAGAAGGCCGATCACCTCCAATCGTTCAAGGACCACATAATCTACAACTACGAAGTGAACAGCTTTACGGGTTTCTACAATTGCAAGACTTGCGACCACGAAACCGAAAGCAAAGATGAGATGGAGAGACACGTCTTGACGCACGAAGAAAAATACGAGTGCGACACTTGTAAAGCGGTATTTTATAACGCGTATAAGTATGCATTGCACGTCAAGAAGCACGACGAAGAGGCGAGCCCGTATAAGTGCCCTCTGTGTGCGTACGTTTCGCCCAGAAGAACGTCGATGTCGCAACATGTAAACATGATCCACTACAAGAGATATCTCTATTACTGCAAGTATTGCGGTAAGGGGTTTTGTGACGTGATGATCTACAAGGAACACGAGGATATTCACATGGGCGCGAAGCCTTTGCTTTGCGTAGTTTGTGGGAAACCGTTCTCGTTCACCAGAAATTTGATCCAACACCAAATCAGATTTCACACCGTCACTATTCTTGGTGCGGAAGGATCGACGCGGAAGAACCAATGCACGATCTGCAAGAAGAGCTACTCCAAAGCATCGACGCTTGATAATCATATGAAGAACCACCACGATAAAAGCAAACCCAAACCGAAGAAGCACCTCTGCGACACGTGCGGTAAAGGTTTCGCCCAGAAGAACAAATTGATCCTGCACAATAGGGTGCATACCGGTTATAAGCCGCACAAATGCAGTTATTGTGAGAAATCCTTCACCAAAAAGGATTACTTGGTGATGCACGAGCGGATACACAGCGGCGAGAAGCCTTACTGCTGCATATACTGTAGAAAGTGCTTCAATCAGGACGCTTCGCTTAGAATTCACATACGTACTCATACTGGTGAACGACCTTACGTCTGTCATTTGTGCACTACGGGTTTTGTATCGAGTGCTTCGCTGAAAATGCACCTCACTAAATGCGCCGGTTAA
Protein Sequence: MHLRTHPGALKRVWDAKSVKTLRISSTFIPVWVKSEHIEEGPYIITPSHINQDNSQRHINKAKPICVKNELWYRPDEKMKPFSATYNKHCLPIHRSRHAKAGDIGQHKCDVCGKYLASLQYLNVHKRMHTGEKPFTCAICEKTFAIKGFLPSWVKDEDLEEGAYIVTPIDIQHENSERHSVKASPSSTRNELWDHHQEKMNPFNAAYNKQYNCDVCHKSLASLQSLFIPSWIKNEDIEEGPYIITPLHINQQNLQGHDNKVTSICVKKELWDHHEKKMEPFSAAYNKQYLSIHRTKHTKSGGMGQYKFIPVWVKSEHIEEGPYIITPSHIKQDNSQRHINKATPMCVKKELWYRPDGKMEPFSATYNKHCLPIHRSKHTKAGGIGQHKCDVCGKSLASLQYLDVHKRMHTGEKPFTFTPLWIKCEDLEEDPYIVTPLHIKQENSQQHSNMVSPICVKMEQWNGHEEKIEPFSASYSKQHLSMHSTKYTRVGGMGQHKCDICGKSLASLQSLNDHIFRIILSDVKGDDIEEGPHIITPLHFEQENVHNRIHAGEKPLICATCERGFANEAVLIRHIRTHKKEKPCISKIWKRVPLHHKEENSQRHSNIVMSLCVKKDLWDRHETKIKSFNAATLHTKGGEIGQHKCDESGKSLASFKFLDVHKRIHTEEKLFVCAICERSFATKAVLQRHIRIHTKENPYLLQKKRRRMRCRRMKKYAWPCKLCDIKFETRKLLVEHKKADHLQSFKDHIIYNYEVNSFTGFYNCKTCDHETESKDEMERHVLTHEEKYECDTCKAVFYNAYKYALHVKKHDEEASPYKCPLCAYVSPRRTSMSQHVNMIHYKRYLYYCKYCGKGFCDVMIYKEHEDIHMGAKPLLCVVCGKPFSFTRNLIQHQIRFHTVTILGAEGSTRKNQCTICKKSYSKASTLDNHMKNHHDKSKPKPKKHLCDTCGKGFAQKNKLILHNRVHTGYKPHKCSYCEKSFTKKDYLVMHERIHSGEKPYCCIYCRKCFNQDASLRIHIRTHTGERPYVCHLCTTGFVSSASLKMHLTKCAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -