Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421884.1:9277537-9285496[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00031 0.056 15.5 0.7 1 23 164 186 164 186 0.98

2 16 0.0003 0.054 15.5 5.4 1 23 191 213 191 213 0.97

3 16 7e-05 0.013 17.5 0.6 2 23 220 241 219 241 0.96

4 16 0.21 39 6.5 1.5 2 20 248 266 247 268 0.92

5 16 3.3e-05 0.006 18.5 0.1 1 23 275 297 275 297 0.98

6 16 8.1e-05 0.015 17.3 4.5 1 23 481 503 481 503 0.97

7 16 9.7e-05 0.018 17.1 5.8 2 23 532 553 531 553 0.97

8 16 0.0039 0.72 12.0 1.9 1 23 559 581 559 581 0.98

9 16 0.00096 0.18 13.9 0.3 1 19 587 605 587 606 0.95

10 16 0.00056 0.1 14.7 0.1 1 23 615 637 615 637 0.95

11 16 7.6e-05 0.014 17.4 5.2 1 21 777 797 777 799 0.96

12 16 7.5e-05 0.014 17.4 0.3 1 23 800 822 800 822 0.95

13 16 9.9e-05 0.018 17.0 0.1 2 21 828 847 827 848 0.94

14 16 0.037 6.9 8.9 0.1 9 23 855 869 853 869 0.93

15 16 5e-06 0.00092 21.1 1.1 1 23 875 897 875 897 0.99

16 16 0.017 3.1 10.0 1.6 2 23 903 925 902 925 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00031	0.056	15.5	0.7	1	23	164	186	164	186	0.98
2	16	0.0003	0.054	15.5	5.4	1	23	191	213	191	213	0.97
3	16	7e-05	0.013	17.5	0.6	2	23	220	241	219	241	0.96
4	16	0.21	39	6.5	1.5	2	20	248	266	247	268	0.92
5	16	3.3e-05	0.006	18.5	0.1	1	23	275	297	275	297	0.98
6	16	8.1e-05	0.015	17.3	4.5	1	23	481	503	481	503	0.97
7	16	9.7e-05	0.018	17.1	5.8	2	23	532	553	531	553	0.97
8	16	0.0039	0.72	12.0	1.9	1	23	559	581	559	581	0.98
9	16	0.00096	0.18	13.9	0.3	1	19	587	605	587	606	0.95
10	16	0.00056	0.1	14.7	0.1	1	23	615	637	615	637	0.95
11	16	7.6e-05	0.014	17.4	5.2	1	21	777	797	777	799	0.96
12	16	7.5e-05	0.014	17.4	0.3	1	23	800	822	800	822	0.95
13	16	9.9e-05	0.018	17.0	0.1	2	21	828	847	827	848	0.94
14	16	0.037	6.9	8.9	0.1	9	23	855	869	853	869	0.93
15	16	5e-06	0.00092	21.1	1.1	1	23	875	897	875	897	0.99
16	16	0.017	3.1	10.0	1.6	2	23	903	925	902	925	0.95

Sequence Information

Coding Sequence: ATGGAATGTGCACAAATAGATTTAAACAACATATGTAGAACCTGTAAAGGTGAGTCCCCTGAAATGAAATCCCTATACTATAGAGATTCGGAAAGGGGTAAGGAGAATCCCCGTTTGGACGAGATGCTAATGACATTTACGTCTCTACAGATTAATAATGATGATGGATTGCCAAAGTTAATATGTCTGCCTTGTCACGTGCTGTTAAAAAGTGCCTATGCGTTTAAGCAGCAGTGTGAAAAGGCAGATGTATCTTTAAGGGAGTATTTGGAGGATTTAAAGAAGGCAACCATGACCGAAGACAATCTTTTGGCCGATTTGGAATATTTAACAAAACTCCTAGATGATAATAGTTCAGAGCTTGAGCAGGTTGATGCGGCCaaggataaaaataaatctgaaaagGTTAATGTTGATCCTAAAATTTCCACAAATGGAGATGTTGAAAAGGATATGGATTCTTCGCAGGTATTTGACGATACAATTATTTATGAGTGCAAAACTTGCTCCAAAGATTTCTTCACTTTAGAAGGGTTAAAGATCCATGAAAGAATTCACTGCGATAACATTTTCAGTTGCAAACAATGTGATAAAACCTATACAACATCACAGCAACTCCACACACACAAATTATCCCACTTGCGGATTAAAGCCTGGGTGTGTAAGATATGTAATAAGACGCTAAcgaaattagaaaatttaaagagtCACTTGATAAGACACCTTAAAAAGACACTTTTGAATTGCTTAAAATGCGGTAGAAGATTTAATTGTGCCCGGCATCTCGAAGAGCACATTACACTGTGTAAAGGAGAGACGGTTTATATTTGTGATATTTGTAACGAAGCTTTCAATCAACAAGACAGCATGGAGGTGCACAGAAAGATACATCAGCATAAGTTTCCTGCGTTGCCCACATTGGAAAATCTAGATAATATCAATATCGTTGAATATTATATGGAAATGGATTATGATGAAAAAACTATGTTTACTAATGAATCAGAGGAAGTAGAGGAGGAAGATTCTGATGTTACAGAAGCAACTGTGGAGCCAGTCGTTGGAATCCTAGAAAATCCTGATCAAGCGATAGCTCAATTAATTAATGAGATTCATGTGCAGCAGGATCCGTCTGAGATGTTGCTGGAAAAAACGAAAAGTGAACAACAGATTCATAGAGCATGTGAAAATGCTAATATTGAGGCTGAtaacgccaacgattttgattTTCATAACAGCACACATTCTGAATGTTTACCTAAGAAACATGCTTCACCGAAAATAAAGAGAGGTAAAAGAAGACGACGTAAGCGCCAGACAGACGGAAGACCTAGAAAACGTCCTCCACTTAAGGACAGAATCAAAACAAAACCCAAACCAAATTCTCTAAAAAGTACGTTGGAGTGGCATACCGATCAGCAACACGACAACGGATTGAAATTCCATGAATGCGAAACGTGTAATAAGAAATTTAGCAGATTAATTAGCCTTAAACGGCATAAATCAACGCATTTGAAAACCAAACCATTTGTAAGCTCCCAAAATTGCACAAAGGGGTTAAAGCTCGATGAAGGAATTAATTCTGAGAAAACTTCCAGGTGCAAACAATGTGGTAAATCCTATACAAAACCACACCATCTTTTTAAACACGAATTAACCCATATTAAGCCTAAATTCTACATATGCAAGATATGTAATAAGCCGATAATAAAATTGGATCGTTTAAAGCATCACTTAAAAAAACACCTTAAAGAGAAACCTTTCAATTGCTTAAAATGCGGTAGAGGATTTATCCGTGCTAGCGATTTCAAAACCCACGTTCCACGGTGCAAAGGCCACAAAGTTTATATTTGCGATATTTGCACTGAAGCTTTCAATCGCCAAGACACTATGGAGGTGCACAGAGAGGCGCATGAGAATAAGTTTCCTGTGTTACCCACGATGGACAATCTAGATAATGTCTTAGAATATTATACGGGGATTGATTACGATCAAAATTCTACATTTACCGAAGAATTGGAGAGGGAGGAAGATTTAAATGTTACAGAAGAGAATGTTAAATCGGAAGTTGAACTTTTGGAAAATCAGGAACAAGTGAAAATGGACGAGATAGCTCAGATAACTAATGAGATTCATATGGCGGAGAAACCATCCGATATGTTACTGGAAAAAGCGAAAAGTGCAGAAGAGATTAACAGGGATTGCGAAGATATGGATATTGCGGCTGATAACGTCAACGATTTTGATTCTCAGAATAACGTTGCCTTTGAGTATGTGAGTGTACCGATGAAGCAACTTTCACCTGTGAAAAGGCATTTGCCACAGAAAAGATATCGGTGTGAGACATGCGAGAAGGCGTACATTAGCAAGTCGCATTTAACCAGACATATGAAATGCCACTTTTTGTGTTCCCAGTGTGGGCAGATGTTTATTCGCTATGATCAATTGGTGCTTCACATAATGAAGCATCAAGGAGAGACATTGGAATGTAAATTCTGTGGGAAGGTCTTTTTTCGAGTATCGGAGTTGCTGGTGCATCAGAGGATTTGCAATATTTCCAAAATAGAATTTGTGACACCCAGCAAATTAGAAGTTCATATGAGGAGACATAGGGGAGAGAAACCGTACCGCTGCGCATATTGTGATGCTGCTTTTACTAATAATAGTACCTTGAAGATTCATTTCCGGAGACACACGGGggagaaattacaatgcaataTGTGCCCACGGAAATATTGGACAGAGAGTGCATTAAACCATCACAAACGACAATTGCATGgtTTAACCTTTGTCGGTAATAGAAGGCAGGTGAAAAAAGTGCGCAAAATCATTCCCGATGCTGTAACGGTTGATGCCTTAaaaatgaacaataaaataaaaactgaagaTGATAGCAGAATAGAAAATGCGCACACACAAGGTTTGACAGTAACTGAAGATATTAGATGTGCGCCCGGAAAATATCAATGTTAA
Protein Sequence: MECAQIDLNNICRTCKGESPEMKSLYYRDSERGKENPRLDEMLMTFTSLQINNDDGLPKLICLPCHVLLKSAYAFKQQCEKADVSLREYLEDLKKATMTEDNLLADLEYLTKLLDDNSSELEQVDAAKDKNKSEKVNVDPKISTNGDVEKDMDSSQVFDDTIIYECKTCSKDFFTLEGLKIHERIHCDNIFSCKQCDKTYTTSQQLHTHKLSHLRIKAWVCKICNKTLTKLENLKSHLIRHLKKTLLNCLKCGRRFNCARHLEEHITLCKGETVYICDICNEAFNQQDSMEVHRKIHQHKFPALPTLENLDNINIVEYYMEMDYDEKTMFTNESEEVEEEDSDVTEATVEPVVGILENPDQAIAQLINEIHVQQDPSEMLLEKTKSEQQIHRACENANIEADNANDFDFHNSTHSECLPKKHASPKIKRGKRRRRKRQTDGRPRKRPPLKDRIKTKPKPNSLKSTLEWHTDQQHDNGLKFHECETCNKKFSRLISLKRHKSTHLKTKPFVSSQNCTKGLKLDEGINSEKTSRCKQCGKSYTKPHHLFKHELTHIKPKFYICKICNKPIIKLDRLKHHLKKHLKEKPFNCLKCGRGFIRASDFKTHVPRCKGHKVYICDICTEAFNRQDTMEVHREAHENKFPVLPTMDNLDNVLEYYTGIDYDQNSTFTEELEREEDLNVTEENVKSEVELLENQEQVKMDEIAQITNEIHMAEKPSDMLLEKAKSAEEINRDCEDMDIAADNVNDFDSQNNVAFEYVSVPMKQLSPVKRHLPQKRYRCETCEKAYISKSHLTRHMKCHFLCSQCGQMFIRYDQLVLHIMKHQGETLECKFCGKVFFRVSELLVHQRICNISKIEFVTPSKLEVHMRRHRGEKPYRCAYCDAAFTNNSTLKIHFRRHTGEKLQCNMCPRKYWTESALNHHKRQLHGLTFVGNRRQVKKVRKIIPDAVTVDALKMNNKIKTEDDSRIENAHTQGLTVTEDIRCAPGKYQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -