Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421882.1:4673711-4679241[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0061 1.1 11.4 3.6 1 23 86 109 86 109 0.88

2 16 0.00035 0.065 15.3 3.2 1 23 115 137 115 137 0.96

3 16 0.0036 0.66 12.1 1.1 1 23 143 166 143 166 0.97

4 16 1.7e-05 0.0031 19.5 5.3 1 23 171 193 171 193 0.98

5 16 0.011 1.9 10.6 3.2 1 23 200 222 200 222 0.98

6 16 2.5e-05 0.0046 18.9 1.3 1 23 228 250 228 250 0.98

7 16 1.2e-05 0.0021 20.0 0.4 1 23 256 278 256 278 0.98

8 16 0.00097 0.18 13.9 5.5 1 23 328 350 328 351 0.95

9 16 0.0032 0.58 12.3 0.5 1 23 357 379 357 379 0.97

10 16 0.63 1.1e+02 5.1 6.4 1 23 385 407 385 408 0.95

11 16 9.1e-07 0.00017 23.4 2.2 1 23 413 435 413 435 0.97

12 16 0.0033 0.6 12.2 1.5 1 23 442 464 442 464 0.97

13 16 9.7e-07 0.00018 23.4 1.0 1 23 469 491 469 491 0.99

14 16 3.4e-06 0.00063 21.6 0.3 1 23 497 519 497 519 0.98

15 16 7e-05 0.013 17.5 3.8 1 23 525 547 525 547 0.98

16 16 0.00019 0.035 16.1 0.4 1 23 553 575 553 575 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0061	1.1	11.4	3.6	1	23	86	109	86	109	0.88
2	16	0.00035	0.065	15.3	3.2	1	23	115	137	115	137	0.96
3	16	0.0036	0.66	12.1	1.1	1	23	143	166	143	166	0.97
4	16	1.7e-05	0.0031	19.5	5.3	1	23	171	193	171	193	0.98
5	16	0.011	1.9	10.6	3.2	1	23	200	222	200	222	0.98
6	16	2.5e-05	0.0046	18.9	1.3	1	23	228	250	228	250	0.98
7	16	1.2e-05	0.0021	20.0	0.4	1	23	256	278	256	278	0.98
8	16	0.00097	0.18	13.9	5.5	1	23	328	350	328	351	0.95
9	16	0.0032	0.58	12.3	0.5	1	23	357	379	357	379	0.97
10	16	0.63	1.1e+02	5.1	6.4	1	23	385	407	385	408	0.95
11	16	9.1e-07	0.00017	23.4	2.2	1	23	413	435	413	435	0.97
12	16	0.0033	0.6	12.2	1.5	1	23	442	464	442	464	0.97
13	16	9.7e-07	0.00018	23.4	1.0	1	23	469	491	469	491	0.99
14	16	3.4e-06	0.00063	21.6	0.3	1	23	497	519	497	519	0.98
15	16	7e-05	0.013	17.5	3.8	1	23	525	547	525	547	0.98
16	16	0.00019	0.035	16.1	0.4	1	23	553	575	553	575	0.96

Sequence Information

Coding Sequence: ATGATCGGGAGGAGACTGTCCACTTTGCACCATCCTCTACAGACTCTGGCACAGTTAATCCGCGAAGTTCGATTTGGTTGGAACGAGGTGCCACAAGCAGACGTTGACCATCTCATGCCGTTGATGCGTGTACAGGAAGTCAAATCATCATTGATCAAGGACGATGTTAAAGGTATTCGCGCCGTTACGACATTATATATCAAACAAGAGGATTCGGATCGCTACCATGAAGAAATAAACCACAATAGTGCTGGGTATACATGTGAAGAGTGCGGCAAGCATTTCAAGAGTTGGATATGCTACGACGGCCACAAAAAGGCGCAACACGAGAAAAGCCCGGACCACAAATGCGAGTTTTGCGGCAAGTACTTCGTCACTAAGCAGTACTTGGCCGTTCATAGAACGCAGCATACGAAAGAGTTCAAATATAAGTGCGATAAATGCGAGCGGGGTTACCTTCGATTGTACGATCTGAAAATGCATCAGAACATTCGCCATGGCACTCCTAGGTTCTCTTGCGAGAAATGCGGGAAGAGTTTTAAGACGAAAGATTATTGCAGGAAACACATGGCGACGCACGATCCCAACAAGGAAGAGTTTGTGTGTGACGTGTGTTCGACCGTGCTTCATCACAAGGGATCTTATGATCGCCATATGCGTCAACACAAGGATACGGGGGAGCACAAGTGTGATATATGCGGGAAATCCGTATCCACATCGTATTATTTGGGCCTACATAAACGCATACATACCGGAGAGAGGCCTTTCGTTTGTGGTATTTGCGAGACGGCTTTTACAGTCAAACAAAGGCTCAAGATACAcatgcggacacacacgaaagagAGGCCTCACATGTGCAAGGTTGTACCAGCACAGTTCCACGACGGTATACGAGAGACTATTTATGCTGTGACGCCATTATACATAAAGCAAGAGGATTTGGATCGCCATCAGGAGAAAGCTAACCAAAATTCTCTTGGATACACTTGTGAAGATTGCGGAAAGTATTTTAAGACGCGGGTATGCTATCAGGGACACAGAAAGGCGCATCATGAAAGGGATCCGAACTACAAATGCGAATTTTGCGACAAATACATCGCCAGTAAGCAGTACTTGGCCGCCCACAGGATACAGCACACGAAACAGTTTAAACATAAGTGCGATAAATGCGAGTGCGGTTATCTGACACTGAGCGAGCTGACGCGGCATCGGTACGTTCACCATAGTACACCCAGTTTCTTTTGCGATAAATGCGGGAAGGGCTTCAAGGCCAAACGAAATCTAAGCACACATATGAGGACGCACGATCCTATCAAGGAGGGGTTCGCGTGCGAGGTTTGTTCGGCCGTGCTCAGTCACAAGAAGTCCTATTATCGCCACATGGAACGTCACCAAGGTATAGGGTATAAATGCGATGTATGCGAAAAATCGTTTACTACCGCCTATTCTTTGAGCCTTCATAAACGCATCCATGCCGGAGAGAAAAATTTCGTTTGTGGTGTTTGCCAAAAAGGTTTTACGAACAAACAAGTGCTCAAGATACACATGCGGATACATACGAACGAGAGGCCCCACAGATGTACCTTTTGCGAAAAGGCATTTGCGCAACATACAGCTCTGCAGATACACTTGCGTCGACATACCGGTGAGAAACCCTATCTGTGTCCTGTTTGCAATAGGAAATTTGCCAGCACGTCAGGATTAGCTAGTCACTCTAAGAAACATATGGAGTGA
Protein Sequence: MIGRRLSTLHHPLQTLAQLIREVRFGWNEVPQADVDHLMPLMRVQEVKSSLIKDDVKGIRAVTTLYIKQEDSDRYHEEINHNSAGYTCEECGKHFKSWICYDGHKKAQHEKSPDHKCEFCGKYFVTKQYLAVHRTQHTKEFKYKCDKCERGYLRLYDLKMHQNIRHGTPRFSCEKCGKSFKTKDYCRKHMATHDPNKEEFVCDVCSTVLHHKGSYDRHMRQHKDTGEHKCDICGKSVSTSYYLGLHKRIHTGERPFVCGICETAFTVKQRLKIHMRTHTKERPHMCKVVPAQFHDGIRETIYAVTPLYIKQEDLDRHQEKANQNSLGYTCEDCGKYFKTRVCYQGHRKAHHERDPNYKCEFCDKYIASKQYLAAHRIQHTKQFKHKCDKCECGYLTLSELTRHRYVHHSTPSFFCDKCGKGFKAKRNLSTHMRTHDPIKEGFACEVCSAVLSHKKSYYRHMERHQGIGYKCDVCEKSFTTAYSLSLHKRIHAGEKNFVCGVCQKGFTNKQVLKIHMRIHTNERPHRCTFCEKAFAQHTALQIHLRRHTGEKPYLCPVCNRKFASTSGLASHSKKHME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -