Caur001710.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- Zfy1
- Assembly
- GCA_949128085.1
- Location
- OX421882.1:4213952-4216652[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0012 0.22 13.6 1.9 2 23 31 53 30 53 0.94 2 22 0.25 46 6.3 2.2 1 23 73 95 73 95 0.96 3 22 0.074 14 8.0 0.6 1 23 98 120 98 120 0.98 4 22 0.18 33 6.8 3.1 1 23 125 148 125 148 0.97 5 22 1 1.9e+02 4.4 2.5 1 12 154 165 154 176 0.79 6 22 2.9 5.2e+02 3.0 0.8 3 23 184 205 182 205 0.91 7 22 0.0098 1.8 10.8 0.5 2 23 216 237 215 237 0.97 8 22 3.1e-05 0.0057 18.6 1.4 3 23 244 264 242 264 0.94 9 22 1e-05 0.0019 20.1 1.4 1 23 270 292 270 292 0.99 10 22 3.3e-07 6e-05 24.8 1.3 1 23 298 320 298 320 0.97 11 22 0.00083 0.15 14.1 0.5 1 22 326 347 326 347 0.94 12 22 0.45 83 5.5 2.6 2 19 388 405 387 410 0.88 13 22 0.00082 0.15 14.1 1.3 1 23 430 452 430 452 0.98 14 22 0.036 6.5 9.0 0.3 1 23 455 477 455 477 0.98 15 22 0.49 90 5.4 5.3 1 23 482 505 482 505 0.97 16 22 6.3e-05 0.012 17.6 1.8 1 23 511 533 511 533 0.98 17 22 0.084 15 7.8 0.8 3 23 541 562 539 562 0.92 18 22 4.5e-06 0.00082 21.3 0.5 2 23 573 594 572 594 0.97 19 22 1.9e-06 0.00034 22.5 0.3 3 23 601 621 600 621 0.98 20 22 3.1e-06 0.00056 21.8 0.7 1 23 627 649 627 649 0.99 21 22 5.4e-07 9.8e-05 24.2 2.1 1 23 655 677 655 677 0.98 22 22 0.00043 0.079 15.0 0.7 1 22 683 704 683 704 0.94
Sequence Information
- Coding Sequence
- ATGCCGGTAAGTGCGAAAAAGAACAATAAGGGAGATGAACCACTCACACGccacaaaagaaataaatcgaATACCGGCCAAAAGTTATGGTCGTGCTCAAAATGCAACGAGTCTTTCTCAGTAGAGCACCAATGGCGAAAACATCGTAAAGAAATCCACAAGAAGGTAATCAAGATAAACCAATTCAATATCTTTTACGACCAAGCTGAGGATATTTATCTCTGCGATAATTGCCCTAAGAAGTCCAGGTGCCGATCAGAGATGGAAGAGCACGTCAAAACTCACGAATCGTACGTCTGCTTAGTTTGCAACGACATATTCTATTCGCCGTACAAATTCTCCGTGCACAATCGGAGCCATGAGCCCAGCTGCTTTAGATGTCCTCTTTGCAACTACCAGACGAATAAAAGATGTTTAATCCAAAACCATATAGACACGAAACACTTAAAGAAGTTCCGGCACACTTGCAGCGTTTGCGGAAAGGGTTTCCAAGACGTGAGGATCTGCAGAGACCACCAGAACAAGCATGCTGGCGCGAAAGCTATCACTTGCATAGTCTGCCGGAAGGAATTTCAAACTACGGCCAGCCTATTATTTCACCAGAGGCGATATCATGCCGTCGACATAGACCCAGTCACACATAATCAATGCAAAGTATGCAAGATAATCTTAAATATGCCCTCCAGGCTAAAGAAGCACATGTTACTACACGAACCTAAGCAACACCTGTGTGATATATGCGGAAAAAAATTTACGACTAAAGATCAACTCGACTTGCACTACGTAATGCATACAGACCTCAAAGAATATAAATGCAGTTATTGCACGAAAGCCTTCGTTCAGAAGAGATACCTGGTGATGCATGAACGCATACACACCGGTGAGAGACCTTTCGCCTGCGAGTATTGCGAGAAGACCTTCAATCAGAGGTCATCTTTGAAGAGACACGTCCGTGGTCACACTGGGGAGAGACCATATCTTTGCCACATCTGCAAGAAAGGTTTTATCTCCAGAGATGTGCTTAATTTACACTTAAAAACCTGCAATGGGTCTCAGCGAAAGCCGTCACAGATGCTAGTAAATACGAATATGAAAAGTAAGAGAGATAAATCCCTggaatgtaaaaatgaaaacaaagtGATTGCTGGCCAAAAGGTGTGGTCCTGCTCGAAATGCACCCAGTCTTTCTCAGCAGAGCGTCAATGGCGGAAGCATTGTAAAGAAGTTCACAAAAAGATCATTAAGATAAACCAATTCAATTTCTTCTACGACAAAGTTGAAGATATCTATTCTTGCGATAATTGCGCGATGATGTTCAGGTCCCATTCGGAGATGGAGGAGCACGTCAAAACTCACAATTCGTACGTTTGCGTAGTTTGCAACGATATATTCTATTCACCGTATAAACTCTCCTTGCATAATCGGAGCCATGAACCCAGCTGCTTCAGGTGTCCTCTTTGCGACTACCAGACGCATAGAAGATGTTTGATCCAAAGTCACATAAACAAGAAACACTTGCAGAAGTTCAGGCATACTTGTAGCGTTTGCGGAAAGGGTTTCCAAACCGTGGCGAACTTCAGAGAACACCAGAATAAACATGCGGCCGCAGAAGATATCCGTTGCATAGTCTGTCGGAAGGAATATCAAACTACGGGTAACCTATTAACTCACCAGAAGCGATATCATACGGTCGATATAAACCCAGTCAGAAATGATCAGTGCAAAGTGTGCCAGATAGTCTTTAAAAGACCCTCCAGGTTGAAGCAGCACATGTTGGTACACGAACCTAAGCAACAGCTGTGCGATATATGCGGAAAAAGTTTTACGACTAAAGATCTACTTAACTTACACTACGCAATGCATACGGCCATCAAAGAATATAAATGCGGTTATTGCACGAAAGCCTTCGTTCAGAAGAGCTATCTAGTGATGCATGAGCGCATACACACCGGTGAGAGGCCTTATACCTGTAAATTTTGCGAGAAGTCCTTCAATCAGAAGACCGCTTTGACGAGACACATACGAGGCCACACCGGGGAGAGACCTTACGTTTGCCACATCTGCAAGAAGGGTTTCATCTCCAAAGATGTGCTTAATTTACACTTCAAAACCTGCGATGGATAG
- Protein Sequence
- MPVSAKKNNKGDEPLTRHKRNKSNTGQKLWSCSKCNESFSVEHQWRKHRKEIHKKVIKINQFNIFYDQAEDIYLCDNCPKKSRCRSEMEEHVKTHESYVCLVCNDIFYSPYKFSVHNRSHEPSCFRCPLCNYQTNKRCLIQNHIDTKHLKKFRHTCSVCGKGFQDVRICRDHQNKHAGAKAITCIVCRKEFQTTASLLFHQRRYHAVDIDPVTHNQCKVCKIILNMPSRLKKHMLLHEPKQHLCDICGKKFTTKDQLDLHYVMHTDLKEYKCSYCTKAFVQKRYLVMHERIHTGERPFACEYCEKTFNQRSSLKRHVRGHTGERPYLCHICKKGFISRDVLNLHLKTCNGSQRKPSQMLVNTNMKSKRDKSLECKNENKVIAGQKVWSCSKCTQSFSAERQWRKHCKEVHKKIIKINQFNFFYDKVEDIYSCDNCAMMFRSHSEMEEHVKTHNSYVCVVCNDIFYSPYKLSLHNRSHEPSCFRCPLCDYQTHRRCLIQSHINKKHLQKFRHTCSVCGKGFQTVANFREHQNKHAAAEDIRCIVCRKEYQTTGNLLTHQKRYHTVDINPVRNDQCKVCQIVFKRPSRLKQHMLVHEPKQQLCDICGKSFTTKDLLNLHYAMHTAIKEYKCGYCTKAFVQKSYLVMHERIHTGERPYTCKFCEKSFNQKTALTRHIRGHTGERPYVCHICKKGFISKDVLNLHFKTCDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -