Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421882.1:4397392-4413109[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0011 0.21 13.7 3.0 2 23 38 60 37 60 0.93

2 17 3.4e-05 0.0062 18.5 0.8 1 23 66 89 66 89 0.94

3 17 7.8e-06 0.0014 20.5 0.9 1 23 95 117 95 117 0.96

4 17 0.00021 0.038 16.0 0.3 1 23 123 145 123 145 0.98

5 17 9.3e-07 0.00017 23.4 2.0 1 23 150 172 150 172 0.98

6 17 0.0042 0.78 11.9 2.6 1 23 181 203 181 203 0.98

7 17 0.00028 0.051 15.6 0.2 2 23 209 230 208 230 0.96

8 17 7.1e-05 0.013 17.5 0.0 1 23 236 258 236 258 0.97

9 17 5.2e-08 9.5e-06 27.4 1.7 1 23 264 286 264 286 0.99

10 17 0.19 36 6.7 1.9 1 21 292 312 292 313 0.91

11 17 2.3e-06 0.00042 22.2 0.9 1 23 351 373 351 373 0.99

12 17 0.00082 0.15 14.1 0.2 1 20 379 398 379 401 0.93

13 17 3.6e-05 0.0066 18.4 2.8 1 23 407 429 407 429 0.97

14 17 0.09 16 7.7 0.2 1 17 435 451 435 451 0.91

15 17 3.4e-05 0.0062 18.5 1.3 1 23 513 535 513 535 0.98

16 17 0.22 40 6.5 0.2 1 13 541 553 541 554 0.91

17 17 0.0074 1.4 11.1 0.3 1 22 606 627 606 627 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0011	0.21	13.7	3.0	2	23	38	60	37	60	0.93
2	17	3.4e-05	0.0062	18.5	0.8	1	23	66	89	66	89	0.94
3	17	7.8e-06	0.0014	20.5	0.9	1	23	95	117	95	117	0.96
4	17	0.00021	0.038	16.0	0.3	1	23	123	145	123	145	0.98
5	17	9.3e-07	0.00017	23.4	2.0	1	23	150	172	150	172	0.98
6	17	0.0042	0.78	11.9	2.6	1	23	181	203	181	203	0.98
7	17	0.00028	0.051	15.6	0.2	2	23	209	230	208	230	0.96
8	17	7.1e-05	0.013	17.5	0.0	1	23	236	258	236	258	0.97
9	17	5.2e-08	9.5e-06	27.4	1.7	1	23	264	286	264	286	0.99
10	17	0.19	36	6.7	1.9	1	21	292	312	292	313	0.91
11	17	2.3e-06	0.00042	22.2	0.9	1	23	351	373	351	373	0.99
12	17	0.00082	0.15	14.1	0.2	1	20	379	398	379	401	0.93
13	17	3.6e-05	0.0066	18.4	2.8	1	23	407	429	407	429	0.97
14	17	0.09	16	7.7	0.2	1	17	435	451	435	451	0.91
15	17	3.4e-05	0.0062	18.5	1.3	1	23	513	535	513	535	0.98
16	17	0.22	40	6.5	0.2	1	13	541	553	541	554	0.91
17	17	0.0074	1.4	11.1	0.3	1	22	606	627	606	627	0.96

Sequence Information

Coding Sequence: ATGCCTACTATTTTGGCTTGTGTCAGGTGGAACATGTCAAGatgtCTGATGGGGGACAATCCTAACAAATGTGAATCTGTGGCTTACCGTAATAAGTGGAAAGTGAACTTACAATGTGTCATTTGCTCTAAATCGTTCACAACGAAATACGGCTACCAACAACATTGCAAGACCGCTCACAAAGCAGGTAATGGCTACAAGTGTGAGGAGTGCGGAAAGGTTTTCAAATCCCTGAAATATTTCATTGGGCATAAAAAGGGCGTCCACGAAAAGAATCCGGACTACATATGCGGTTATTGCGGTAAATGTTTCGCAACCAAAGATTCCATGGCGGCTCACAGGGTTCGTCACACGAAAGAATATAAATACAAGTGCGACAAATGCGACCAAGGCTACTTGAGACCGTCCGAGTTGAAAGTGCACCAGGAGAGCCACAGCGCCGAGCGTTACGTTTGCGATAAATGCGACAAGGTGTTTAAAAAGTCCTCCTACTTCAGGCAGCATCTGGCGACACACCAGCCGGATTACGTCGCGAAGGAATACTTTTGCGAATTGTGTTCGAAGGTGTGCACGGGTAGCAACGCCTGGTACAAGCATATGAAACGCCATGAAGCGGAGAAATGCGTATGCGAAATTTGCGGTAAGGGTCTTGCCGATTCCAGAGGCTTGGCCGAACACAAACGCACGCATTCCGGAGAGAGACCTTACGTTTGCGATACTTGTGGTAGAAGTTTTGTGGTGAAGAGGGCGCTCTTGGCCCACGCTGTGACGCACACCAAGGAGAAGCCCTATCAGTGTCGAGAATGCGACAAGGCTTTCACACAGAAGAGTACACTTAACATACATTTACGGAAACATACGGGAGAGAAGCCTTACGCTTGTGCCTTCTGTGAAAAGCGCTTCATCAGTaaatgtttgttaaattttCACATTAAACGAAACAATTTGAAATGGCACAATAATGAGGTAACGCCACTGTGTGTTAAGAAGGAGATATGGGATCGTTATGAGGACGAGCACAAGCACACGCAAGGTGATGGTGTAGGAGAATATAAATGCGATGTATGCGGAAAATCGTTTGCTTCACTCGAGTACTTCTATGCGCATAAACGCATGCATACCGGAGAGAAGCCCTTCAATTGTACTACTTGCGAGGAAGCTTTTGCAAGTAGAGATTTACTTCGCTTACATATGTGGATGCACTCGAAAGAAAATCTTCATGTATGTGAGcgttgcgacaagggttttgcaaCCAAGGGACAGCTCCACATACATAGGCagacacacacgaaagaaaagcttTACATCTGCAAATTTTGCGAGAAGGCCTTTGAGGACGCTACGACACTGACgtttatacCAGTATGGGTCAAAAGCGAGGATATAGAAGAGGATCCCTATGTCACAATACAATCTCATATTAAGCAAGAAAATTCGAAACGGCACAATGATAACCTAACCCCACTCTGCGTTAAGGAGATATGGGATCGTCATGAAGATGATGACAAGCACACGAAAGGCGGTGGTGTAGGACAATATAAGTGCGATGTATGCGGAAAATCTTTTGCTTCACTCCAGTACTTCGATACGCATAAACGCCTGCATAGCGGAGAGAAGCCCTTCACTTGCACTATTTGCGAGGAAGCTTTTGCAAGCAAAGATGTGCATGCGAGATATGCGACAAGACGTTTAGCAACCCCTCGAGTTTGGCCGAACACAAGCGTACACACTCAAATAAAAGCGCTCATGTTTCTAATATATGTCAGGAAAAATGCGTCGATGGCGCACGCTGTAACCCACAGCATGGAAAACGCCTACAAATGTCGAGAATGCGAAATGGCTTTCAGACTAAAGTTTGCTCTTGATATACACTTACGGAAACGTAGAGGTGACCTTTGTGATAATATGTCAGTCAGCTTGACCGATCACAAACTCACGCAATCCGACGAGAAACCTTAA
Protein Sequence: MPTILACVRWNMSRCLMGDNPNKCESVAYRNKWKVNLQCVICSKSFTTKYGYQQHCKTAHKAGNGYKCEECGKVFKSLKYFIGHKKGVHEKNPDYICGYCGKCFATKDSMAAHRVRHTKEYKYKCDKCDQGYLRPSELKVHQESHSAERYVCDKCDKVFKKSSYFRQHLATHQPDYVAKEYFCELCSKVCTGSNAWYKHMKRHEAEKCVCEICGKGLADSRGLAEHKRTHSGERPYVCDTCGRSFVVKRALLAHAVTHTKEKPYQCRECDKAFTQKSTLNIHLRKHTGEKPYACAFCEKRFISKCLLNFHIKRNNLKWHNNEVTPLCVKKEIWDRYEDEHKHTQGDGVGEYKCDVCGKSFASLEYFYAHKRMHTGEKPFNCTTCEEAFASRDLLRLHMWMHSKENLHVCERCDKGFATKGQLHIHRQTHTKEKLYICKFCEKAFEDATTLTFIPVWVKSEDIEEDPYVTIQSHIKQENSKRHNDNLTPLCVKEIWDRHEDDDKHTKGGGVGQYKCDVCGKSFASLQYFDTHKRLHSGEKPFTCTICEEAFASKDVHARYATRRLATPRVWPNTSVHTQIKALMFLIYVRKNASMAHAVTHSMENAYKCRECEMAFRLKFALDIHLRKRRGDLCDNMSVSLTDHKLTQSDEKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -