Caur001731.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cetonia aurata
Gene Symbol
-
Assembly
GCA_949128085.1
Location
OX421882.1:4367465-4375097[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0046 0.85 11.8 1.1 1 23 9 37 9 37 0.92
2 25 0.0033 0.61 12.2 6.0 1 21 42 62 42 63 0.94
3 25 0.00027 0.049 15.7 0.0 2 23 103 124 102 124 0.95
4 25 0.0059 1.1 11.4 1.2 2 23 131 153 130 153 0.94
5 25 0.00021 0.038 16.0 0.2 1 23 159 182 159 182 0.95
6 25 0.0042 0.77 11.9 4.0 1 21 188 208 188 211 0.95
7 25 0.022 4 9.6 0.1 1 23 217 240 217 240 0.94
8 25 0.0002 0.036 16.1 4.7 1 23 246 268 246 268 0.98
9 25 0.0042 0.77 11.9 6.3 1 23 273 295 273 295 0.98
10 25 0.067 12 8.1 1.0 1 23 304 326 304 326 0.97
11 25 0.0022 0.4 12.8 1.1 1 23 330 353 330 353 0.83
12 25 1.8e-06 0.00033 22.5 0.9 1 23 359 381 359 381 0.98
13 25 4.4e-07 8.1e-05 24.4 0.9 1 23 387 409 387 409 0.98
14 25 0.27 50 6.2 7.9 1 23 415 437 415 437 0.97
15 25 0.061 11 8.2 0.8 2 23 464 485 463 490 0.94
16 25 9.4e-06 0.0017 20.3 1.9 1 23 491 514 491 514 0.95
17 25 0.00016 0.03 16.4 0.3 1 23 520 543 520 543 0.94
18 25 0.00014 0.025 16.6 2.5 1 22 549 570 549 572 0.89
19 25 0.031 5.8 9.2 3.4 1 23 577 599 577 599 0.97
20 25 2.3e-07 4.3e-05 25.3 1.0 1 23 604 626 604 626 0.97
21 25 0.0012 0.22 13.6 0.6 1 23 635 657 635 657 0.99
22 25 1.4e-06 0.00025 22.9 0.2 1 23 662 684 662 684 0.98
23 25 5.4e-06 0.001 21.0 0.1 1 23 690 712 690 712 0.98
24 25 2.1e-07 3.8e-05 25.5 0.6 1 23 718 740 718 740 0.99
25 25 0.0084 1.5 11.0 4.2 1 23 746 768 746 768 0.97

Sequence Information

Coding Sequence
ATGAAGCACGCGAAAGAGTTCAAGTACAAATGTGAGCAACGGAGATACGGTAGAAACTGCAATCGCGGTTTCTACCGTATCTCCGATCTGAAACTCCACCAGAAAGGTCACGTCGCAGAAGAATACACCTGTGACAGGTGCCACAAGGTGTTTAAACGGAAATTCTACTTTAAGGAGCATTTTAAACGCATGAATGTGCGCAGGAATACGTTTGCAATTTGTGTTCGAAGGTATCTACTACAAACCATTTTTCACCATTTTCAAGGCTCAAACTCTCCAAACACTTCTTCGATGAGCAGTTTCTGGCAGTGTCCTGTTTGCGCTAAAATGTTCGCAACAAAATCCACTTGGGAGGAGCACATAGAGGGCCATGGCGAAGGTGAAGGTTGCATCTGTAAAGAATGTGGTGAGGTGTTCCTGTCTTTGAAAGATTTGACGGAACACAAGAGAAACTTGCACGGCATCGGCGCCGATTACAAGTGCAAAGAGTGCAATGCGAGCTTCGCGTTTTGGGACGACTACGCGCAACATAGGATAAACATTCACGGCCGTGGCCAGGGCTATAAATGCGAGGATTGCGGAAAAATCTATAAGCATCTGAGGTATTTCACCGGCCATGTGAGATGCGTTCACGAGAAGAATCCCGACTACGTGTGTGAGTACTGCGGTAAATGGTACTCGGCCAAAGAACCGCTGGTCCGACACAAGGCGATGAAGCACACGAAAGAGCTTAAGTACAAATGCGAGAAGTGCAATTGCGGTTTCTACAGTAGTTTCGAACTGAAGCGGCACCAGGAGAGCCACAGCACCGAGCGGCACACTTGCGGCACGTGCCACAAGGCGTTTAAGATGAAATTTTATTTCGATAAGCACATGGCGACCCACGAACCCGGTTACGTGCCGAAGGAGTACGCCTGTCACTTGTGCTCGAAGGTGTGGTCGGTTAGATATCTCTGGTATAAGCATATGGCACGTCACAAGAAGAAGTACATGTGCGAAATCTGCGGTAAGACGTTCGCTAATTCTATGAGCCGTTTGCTCGAACACCGGCGTACGCATTCTGGTGAAAAGCCTTTCACTTGCGACATTTGCGGGAGACGTTTCGGCACTAAGAGGACGCTGAGCAACCACATCCTAACTCACACCCAGGAGAGGCCTTTCAAATGTAAAGAATGCGGGAAGGGCTTCTCGCAATCGGGTACCCTTAAGATACATGAACGGCAGCATACTGGTGAGAAACCTTACCAGTGCTCGTTTTGTGAGAAACGTTTCATAAGCAAATGTTTATTACGATTCCATTTGAAGCACCATCGGTTTCCGGCGGAAGTTAAACAGGAACATCTCGAAGATGCATACAGCCCGAAAGCATCTTCGCCGAAAAAACTAGTGCGATGTCCTACCTGCGCTAAAGTGTTCACATCAGAATTACGCCGAAAGGAACACATGGAGATCCACACGAAGAGCGGTCACTTCAAGTGTAAGGATTGCGAGGAGACCTTCAAGTATTGGGAACACCTAGCGCAACACAGGAAGGACGCTCACGTGGGTGGAAAATGTTACAAGTGCGAGGAATGCGGAAAGTCCTATAAGACACTCGACTTCTTCGCCGGGCACGTCAAGGGCGTCCACGAAAAGAATCCGGATTATATTTGCGATTACTGCGGCAAATGCTTCACGACCAAAGACCGAGTGGCGCGGCACAAGGCTTTCGACCACAAAGAATTGAAACACAAGTGCGAGCGATGCCAGCACGGTTTCCTGAGCAAGGCCGAATTGACGAAGCACCAGGAGATCCACAACACCGAGCAACACGTTTGCGGCCAGTGCGATAAGGCGTACAAGAACAGGTCTAATCTCAGAGCGCACATGGCGACGCACAAACCCGGCTACGCGAAGAAGGAGTACgtttgtaaattgtgttcgaAGGTGTTGACGGGCAGCAACGCCTGGTACAAGCACATGAAACGTCACAGGGGGAAGAAATACATGTGCGAAATTTGCGGCAAGACGCTCACTAATCCGACCGGCTTGACGGAACACAGACGCACGCATTCCGGTGAACGACCTTACGTTTGTGGTACTTGTGGGAAACGTTTTGTGGTTAAGAGAGGGCTCCAAGTGCACATTCTGACCCATACCAAGGAGAAACCTTATAAGTGCCAAGTATGCGGACAGGCATTTTCCCAATCGGGTACTCTGAAAATACATTTACGGAAGCATTCTGGAGAGAAGCCCTATGAGTGTTCGTTTTGTGATAAAAGCTTCATCAGCAGATGCTTACTGAACTTTCATTTAAAGAATCACCAGTAG
Protein Sequence
MKHAKEFKYKCEQRRYGRNCNRGFYRISDLKLHQKGHVAEEYTCDRCHKVFKRKFYFKEHFKRMNVRRNTFAICVRRYLLQTIFHHFQGSNSPNTSSMSSFWQCPVCAKMFATKSTWEEHIEGHGEGEGCICKECGEVFLSLKDLTEHKRNLHGIGADYKCKECNASFAFWDDYAQHRINIHGRGQGYKCEDCGKIYKHLRYFTGHVRCVHEKNPDYVCEYCGKWYSAKEPLVRHKAMKHTKELKYKCEKCNCGFYSSFELKRHQESHSTERHTCGTCHKAFKMKFYFDKHMATHEPGYVPKEYACHLCSKVWSVRYLWYKHMARHKKKYMCEICGKTFANSMSRLLEHRRTHSGEKPFTCDICGRRFGTKRTLSNHILTHTQERPFKCKECGKGFSQSGTLKIHERQHTGEKPYQCSFCEKRFISKCLLRFHLKHHRFPAEVKQEHLEDAYSPKASSPKKLVRCPTCAKVFTSELRRKEHMEIHTKSGHFKCKDCEETFKYWEHLAQHRKDAHVGGKCYKCEECGKSYKTLDFFAGHVKGVHEKNPDYICDYCGKCFTTKDRVARHKAFDHKELKHKCERCQHGFLSKAELTKHQEIHNTEQHVCGQCDKAYKNRSNLRAHMATHKPGYAKKEYVCKLCSKVLTGSNAWYKHMKRHRGKKYMCEICGKTLTNPTGLTEHRRTHSGERPYVCGTCGKRFVVKRGLQVHILTHTKEKPYKCQVCGQAFSQSGTLKIHLRKHSGEKPYECSFCDKSFISRCLLNFHLKNHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-