Caur001754.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cetonia aurata
Gene Symbol
-
Assembly
GCA_949128085.1
Location
OX421882.1:4977978-4985069[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.7e-05 0.0031 19.5 0.1 1 23 99 122 99 122 0.97
2 28 0.15 28 7.0 0.0 1 20 129 148 129 149 0.91
3 28 0.011 2 10.6 0.8 2 23 162 184 161 184 0.97
4 28 0.026 4.8 9.4 1.5 2 23 196 218 195 218 0.92
5 28 0.00015 0.028 16.4 0.1 3 23 227 248 226 248 0.94
6 28 0.028 5.1 9.3 2.6 1 23 254 277 254 277 0.94
7 28 0.00081 0.15 14.2 0.1 2 23 284 306 283 306 0.95
8 28 0.00084 0.15 14.1 8.0 1 23 312 334 312 335 0.94
9 28 1.8e-05 0.0033 19.4 0.2 1 23 340 362 340 362 0.98
10 28 0.00015 0.027 16.5 0.8 1 23 370 392 370 392 0.98
11 28 0.0005 0.092 14.8 0.2 1 23 398 420 398 420 0.95
12 28 4.8e-07 8.8e-05 24.3 0.3 1 23 426 448 426 448 0.99
13 28 3.2e-06 0.00059 21.7 2.0 1 23 454 476 454 476 0.98
14 28 3 5.5e+02 2.9 0.2 1 9 482 490 482 496 0.87
15 28 0.00023 0.043 15.9 0.2 1 23 543 566 543 566 0.96
16 28 0.0054 0.99 11.6 2.2 1 22 573 594 573 594 0.95
17 28 0.00045 0.083 15.0 0.1 2 23 603 625 602 625 0.96
18 28 0.009 1.7 10.9 1.4 2 23 637 659 636 659 0.92
19 28 2.8e-05 0.005 18.8 0.1 3 23 668 689 667 689 0.96
20 28 0.035 6.4 9.0 0.7 1 23 695 718 695 718 0.81
21 28 0.0023 0.43 12.7 0.2 2 23 725 747 724 747 0.95
22 28 1.5e-05 0.0027 19.7 4.4 1 23 753 775 753 776 0.95
23 28 0.00014 0.026 16.5 0.3 1 23 781 803 781 803 0.98
24 28 0.00013 0.024 16.6 1.8 1 23 811 833 811 833 0.98
25 28 0.00021 0.038 16.0 1.3 1 23 839 861 839 861 0.95
26 28 2.2e-06 0.00039 22.3 0.2 1 23 867 889 867 889 0.99
27 28 2.1e-06 0.00038 22.3 2.2 1 23 895 917 895 917 0.98
28 28 4.8e-05 0.0089 18.0 0.8 1 23 923 945 923 945 0.98

Sequence Information

Coding Sequence
ATGTTTATCAATTCGGCACGATCTCAGAGGTCTGTAAAAGTTGACGACGGAAAAGAAAAAGACGAGGAGGATGGAGACGAAGTAGATGATGaagtagaagaagaagaagatgaaggagaagaagaagaagcagAAACAGGTGATGAAATAGAAGACGAAGAAGTGGAGggagaagaggaagaagaagaagaggatgaggaagacgaagaagaagaagaggaagaggaagaggaagaagatgAAGACGACGATGATCGTGAAGAAGGAGAAGTGAAACCGTCTGCTCGATTAAAATATGTATGCCCCTTCTGTCCCAAAGCATTTCCCACATCGCTCTCTCTGGAACGTCACAAAATAACAGTTCATCGAAAAATTTTCTGCCCCTATATCTGCGATAGATGTGGAAAATACTTCCCTGCCGATGCATTATTGCAAATTCACAGAACAGCGTCTTGCAAAGGCAGCAAAAGCAGAGCAAGCATCCAGTGCGAAAAATGTCCGGAATTCTTCTTGTCCCGATACGACCTGCGCTTACACGAGAAAACCAAACACAAAGATCCATTTTTGGCCCAGATCGGCCTGATCACCTGCGAATTCTGTCTGAGAGATTTTCCGAATCAAACCGCCTTGCGTCACCATCACTTGGCCATACACAAAGAGGAGGTGTCGATAGTCGACTGCGAGATTTGCGAGAAACCTTTCAGAAGCGCGGAAGAGCTAGAGAAACACAAGACGATTTGGCACAATGAAAGTCACAATTATCACTGCGATATTTGTACGAAGAGTTTTATGTTTGAGTATCGTTTGGAGATGCACAAGAAGGAAATCCACGAAGCCAATATCGGGTTGGTGTGTAATATCTGTCAGAAAGCAGCTGGAAGTAAATCCGCTTTGACTAAGCACGTGAATAAAATGCATAGGACGGAGGCCGAGCATAAATGCGACCAGTGCGATAAAGTGTTCATGTCATCTTCGCACTTGAAGGAGCATCACGATTTGCATCACAACGTAAGGCGGTTTACGTGCAAGGACTGCGGTAAGATATTGGTCAGTCCCAGCGGATATAAGAGACATCTCGCTATGCACAAACCGGGATACGTCAAAGAATATGTGTGTCAGATCTGCGCGAAAGTGCTCATTCACATTTCGTCATTGAAAAAGCATATGAAGTTGCACAATGATAGAGTGCAACACGTGTGCGATATTTGTGGGAAGGTGTTAGCTACCAAGCAGGCTTTAATCTTACATAGGACCCAGCATACCGGGGAGAAACCTTATGTTTGTGACACGTGCGGGAAAGCGTTCGCTAGGAAACAGTATCTGACTGATCATATTCTCACCCACACTAAAGAGAAGCCGCATAAATGCGAAGTTTGCGGAAAAGGCTTTTCTCAGAGGACCAGTGTTAGGGTGCACATGCGCTATCATACTGGTGAGAAGCCCTATGAGTGCGAGATTTGTCAGAAGAGGTCTGTAAAAGTTGACGATGCAAAAGAAGAAGATGAGGTAGAAGAGGAAGAAGCAGATAGTGAagtagaagaagaagaggagaAAGGAGAAGAGGAGGAAGAAGAAAACGATGATGGTTGTGAAGAAGGAGAGATAAAATCGTCTGCTCCATTAAAATATCTATGCTCCCTCTGTCCGAAAGCTTTCCCCACCCCGCTTTCCGTGAAACGTCACAAAAGAACAGTTCATAGAAAAATTCTCTGCCCCTACATCTGCGATAACTGTGGAAAATACTTCTGTTTGGAGCAGAACTTCCAGACTCACCGAATGACTCCTTGCAACGGCACCGAAAGCATCCAATGCCTGAAGTGTCCGGCAATCTTTTCCTCGCCGTACGATTTGCGCTTACACGAGAAAACCGAACACAAGGATCCGCTCTTGGCGGAGTTCGGCTTGATCACGTGCGAATTATGTTTGAAAGATTTTCCGAATCAGACCGCCCTGCGTCACCATCACTTGGCCATGCACAGAGACGAGGTGCCGGTAGTCGCCTGCGAGATTTGCGAGAAACCTTTCAGGACCGCGGAGGAGCTGGAGAAACACAAGAAGAGTTGGCACAACGAAAGTCACAATTATCAGTGCGATATTTGTAAGAAGAGTTTTATGTGGGAGTATCGTTTGGAGATGCACAAGAAGGAGATTCACGAGGCCAACGTCGGGTTGGTGTGTGACTTCTGTCAGAAAGGAGTTGGGAGTAAATCCGCTTTGACCAAGCACGTGAACAAGATGCACAGGGAGGAGGCGGAGCATAAATGCGACGAGTGCGATAAAGTGTTCATGTCACCTTCGCACTTGAAGGAGCATCAAGATTTGCATCACAAGGTAAAGCGATTTACGTGCAAGGACTGCGGTAAGATATTCCTTAGCCCCAGCGGATACAAGAGCCATCTCGCCATGCACAAACCGGAATACGTTAAAGAATATGTGTGTCACATCTGCGCGAAAGTACTCATTCATATATCATCGTTGAACAAGCATATGAAGTTGCACAGTGATAGAGAGCAACACGTGTGCGATATTTGTGGCAAGTCGTTAACTACCAAGCAGACTTTAATCTTACATAGGACCCAGCATACCGGCGAGAAACCTTATGTTTGTGACACGTGCGGGAAAGCGTTCGCGAGGAGGCAGTATCTGAGTGATCATATTCTTACCCATACTAAAGAAAAACCGCATAAATGTGAAATCTGCGGTAAAGGTTTTTCTCAGAGGACCAGTGTCAAGATCCATATGCGTTACCATACTGGTGAGAGGCCCTATGAGTGTCAAATTTGTCATAAGGGTTTCATATCCAGGGGACTCCTAACCATCCATTCCAAGATTCATGGGAGCAAAATATAG
Protein Sequence
MFINSARSQRSVKVDDGKEKDEEDGDEVDDEVEEEEDEGEEEEAETGDEIEDEEVEGEEEEEEEDEEDEEEEEEEEEEEDEDDDDREEGEVKPSARLKYVCPFCPKAFPTSLSLERHKITVHRKIFCPYICDRCGKYFPADALLQIHRTASCKGSKSRASIQCEKCPEFFLSRYDLRLHEKTKHKDPFLAQIGLITCEFCLRDFPNQTALRHHHLAIHKEEVSIVDCEICEKPFRSAEELEKHKTIWHNESHNYHCDICTKSFMFEYRLEMHKKEIHEANIGLVCNICQKAAGSKSALTKHVNKMHRTEAEHKCDQCDKVFMSSSHLKEHHDLHHNVRRFTCKDCGKILVSPSGYKRHLAMHKPGYVKEYVCQICAKVLIHISSLKKHMKLHNDRVQHVCDICGKVLATKQALILHRTQHTGEKPYVCDTCGKAFARKQYLTDHILTHTKEKPHKCEVCGKGFSQRTSVRVHMRYHTGEKPYECEICQKRSVKVDDAKEEDEVEEEEADSEVEEEEEKGEEEEEENDDGCEEGEIKSSAPLKYLCSLCPKAFPTPLSVKRHKRTVHRKILCPYICDNCGKYFCLEQNFQTHRMTPCNGTESIQCLKCPAIFSSPYDLRLHEKTEHKDPLLAEFGLITCELCLKDFPNQTALRHHHLAMHRDEVPVVACEICEKPFRTAEELEKHKKSWHNESHNYQCDICKKSFMWEYRLEMHKKEIHEANVGLVCDFCQKGVGSKSALTKHVNKMHREEAEHKCDECDKVFMSPSHLKEHQDLHHKVKRFTCKDCGKIFLSPSGYKSHLAMHKPEYVKEYVCHICAKVLIHISSLNKHMKLHSDREQHVCDICGKSLTTKQTLILHRTQHTGEKPYVCDTCGKAFARRQYLSDHILTHTKEKPHKCEICGKGFSQRTSVKIHMRYHTGERPYECQICHKGFISRGLLTIHSKIHGSKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-