Caur001727.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cetonia aurata
Gene Symbol
-
Assembly
GCA_949128085.1
Location
OX421882.1:4283217-4292031[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 44 0.00052 0.095 14.8 0.3 1 23 52 75 52 75 0.96
2 44 0.00033 0.06 15.4 1.2 1 23 81 104 81 104 0.94
3 44 7.5e-05 0.014 17.4 0.5 1 23 110 133 110 133 0.96
4 44 0.00019 0.034 16.2 0.9 1 23 139 161 139 161 0.99
5 44 0.0011 0.2 13.7 5.2 1 23 165 187 165 187 0.97
6 44 0.0017 0.32 13.1 1.0 1 23 196 218 196 219 0.96
7 44 0.00068 0.12 14.4 0.0 1 23 224 246 224 246 0.98
8 44 2.8e-05 0.005 18.8 0.1 1 23 252 274 252 274 0.98
9 44 4.7e-05 0.0086 18.1 1.6 1 23 280 302 280 302 0.94
10 44 0.0069 1.3 11.2 2.4 1 23 310 332 310 332 0.97
11 44 0.001 0.19 13.8 1.8 2 23 369 391 368 391 0.94
12 44 2.4e-05 0.0043 19.0 0.8 1 23 397 420 397 420 0.96
13 44 3e-05 0.0055 18.7 0.9 1 23 426 449 426 449 0.95
14 44 0.00015 0.028 16.4 0.3 1 23 455 478 455 478 0.93
15 44 0.011 1.9 10.6 0.9 1 23 484 506 484 506 0.98
16 44 3.4e-06 0.00062 21.6 0.9 1 23 510 532 510 532 0.98
17 44 0.0004 0.072 15.1 1.7 1 23 541 564 541 564 0.96
18 44 0.00012 0.022 16.8 0.0 1 23 569 591 569 591 0.98
19 44 0.25 46 6.3 0.5 1 13 597 609 597 611 0.87
20 44 0.0034 0.62 12.2 1.0 2 23 629 651 628 651 0.94
21 44 0.011 2 10.6 2.5 1 23 656 679 656 679 0.95
22 44 0.019 3.4 9.9 1.6 2 23 686 708 685 708 0.94
23 44 0.0029 0.53 12.4 0.9 1 23 714 737 714 737 0.98
24 44 0.00026 0.047 15.7 2.1 1 23 742 764 742 764 0.97
25 44 0.034 6.3 9.0 0.8 1 20 769 788 769 790 0.97
26 44 0.0011 0.21 13.7 2.3 1 23 797 819 797 819 0.92
27 44 0.0025 0.46 12.6 1.2 1 23 825 847 825 847 0.98
28 44 0.00048 0.087 14.9 3.9 1 23 853 875 853 875 0.98
29 44 6.3e-06 0.0012 20.8 2.3 1 23 881 903 881 903 0.98
30 44 0.0012 0.22 13.6 0.7 2 23 924 946 923 946 0.95
31 44 0.0044 0.8 11.9 3.3 1 23 951 974 951 975 0.96
32 44 1.9e-05 0.0035 19.3 0.8 2 23 981 1003 980 1003 0.91
33 44 0.00042 0.076 15.1 1.0 1 23 1009 1032 1009 1032 0.98
34 44 4e-05 0.0072 18.3 1.6 2 23 1038 1059 1038 1059 0.98
35 44 0.014 2.5 10.3 3.2 1 20 1064 1083 1064 1086 0.95
36 44 0.0016 0.29 13.2 1.6 1 23 1092 1114 1092 1114 0.90
37 44 2.7e-06 0.00049 22.0 1.0 1 23 1120 1142 1120 1142 0.99
38 44 1.5 2.8e+02 3.9 1.5 1 14 1148 1161 1148 1162 0.92
39 44 0.49 89 5.4 1.7 3 23 1201 1221 1200 1221 0.95
40 44 0.81 1.5e+02 4.7 1.4 1 21 1385 1405 1385 1406 0.95
41 44 0.31 56 6.1 0.1 2 23 1413 1435 1413 1435 0.92
42 44 0.044 8.1 8.7 3.3 3 23 1441 1461 1440 1461 0.97
43 44 0.0081 1.5 11.0 4.1 1 23 1467 1490 1467 1490 0.96
44 44 2.8e-06 0.00051 21.9 1.5 1 23 1495 1517 1495 1517 0.98

Sequence Information

Coding Sequence
ATGGAGGCCACACTTGACATCGAAAACTTTGTGAAATGCGAGCAAAACGTGGATATCAAAATTGAGGAGACTGAAGCGTGTACCTGCGACGAATGCAGAGGCTTGTTTGTGCCTGAGCAAGATTTAGTTAGCGAGAAAACTGGCCGGCGCGAATACAAATGCGAAGACTGCGATGAGGTCTTCAAATTTTGGAAACCGTTCGCTGAACATAGGAAAGAGATCCACTTAGGCGATGACGACTACACATGCGAGGAGTGCGAGAAGGTCTTCAAGTCTCTCAGCCACTACTACGGCCACGTGAAAGGCGTTCATGAGAAGGATCCGAACTACGTATGCGACATCTGCGGAAAATGCTTCGCGAAAACTTACGCCATGGTCAGACATAGGATCGTCGTCCACACGAAAGAATTCAAATACAAGTGTTCGCATTGCGATCGCGGTTTCATCGGTAGAGCGGAATTTGAGGTGCACGAAAGAAGTCACACCGAGCGGCACTCTTGCGGCCAATGCGAGAAGATATTTAAGAATAAAACTTGCTTGAAGCAACATCTGGCGACGCACCAACCCGGTTACGTGGCGAAACAGTATGTTTGTGAATTTTGTTTGAAAGTAACCTCGAGCAGGGGCGGCTTGTATAACCACATACGGTTGCACCACAAACAGACGAAGTACATATGCGAAATCTGCGGTCTGGCACTTAGTACTTCAGTAGGTTTGACCGATCATAAGCGCATACATTCAGGCGAGAAGCCTTTTGTTTGTGGTACCTGCGGGAAGGCTTTCGCAGTGAAGAACAAGCTTGTTATTCATATCCGAAGCCATACGAAGGAGAAGCCTTATAAATGTGAAGAATGCGGAAAGGCTTTCGCTCACAGGAAGACACTTACGCTGCATTCAAGCGAGCACACGGGCGAGAAAGCTTATCCTTATCAGTGTTTGCTCTGTGAGAAACGCTTTGTAAGCAAACGCTCATTACAATTTCACTTAAAAAATCATCAGTATCCAGTGGAGGTCATACTTGGTTTGCCTGACGATGCGAATGCTCAAAATTGGATCAAATGCGAAGAAAACGTAGAGACCAAAATCGCAGCCTCCGTCGCGTGTACCTGCGACAAATGCAGCGAGGTATTTGTGTCTCGGAGAGCTTTAATTAGACACAAAAGAGACCTGCACACCAACCGTCACGAATACAGATGTGAGGATTGCGAGAAAGTCTTCAAATTTTGGAAAGCATTCGCTCGCCATAGGAAAGAGGTCCATATAGGAGGTGACGATTACAAATGCGAAGAGTGCGGGAAGGTCTTCAAGAACTTGAAGAACTTCTATGGCCACGTGAAGGGCAGCCATGATAAGAATTTGAAGTACGTTTGCGATGTCTGCGGTAAAGGGTTTGCGAGAAATCACACGATGGTTAGGCACAAGGTCGTCATTCACACGAAAGAATTTAAATATGAGTGTTATCATTGCAATCGCGGATTCCTAGGTAGAGCTGAACTTAAAGCACACGAAAGGAGTCATAGCGAGCGATACCCTTGCGATAAATGCAACAAGACATTTAAGAAGAAAGCTTCATTgaaggagcatttaataataCACGAACCCAGTTACGTTCCACAATTGCACGTTTGTCAACTGTGTTCGAAAGGGTTCCCCAGCAAGAGCGGATTATATAACCACCTAAAGTCTTACCACGAACAGACGAAGTACGTATGCGAAATCTGCGGGCTAGCACTTACCACTGCTGTTAATTTGGTAAACCACAAGCGCATACATTCAGGTGAAAAGCCGTTTGTTTGCGATACTTGTGGTAAAGCTTTCGCGGTGAAGAAGAAATGCCTGGTGCAAGACAATTCTGGTAATTCTAGAAGCAAAGACTTCACAAATAAGTGCCCTGTTTGTTCCAAAGTCTTTACCAAGAAAAACAGCATGGATCTGCATCTGAAGTTTGTCCACCAGAAGGGTAACTATCCTTGCGATGAATGCGGAAAAATGTTCAAATGCGAAAGATACCTGAGCAATCACAAAAAGAACGCACACCAATTCAGACCCAACCTGGTCTGCGAAATTTGTAGTAAGCAATTTTCGTGTAAGTACTATCTGTCCATCCACATGATCAACCAACACTCGAAGGAATATAACTTCAAGTGCGATGTATGCGACCGTGGTTATCTCACCATGTCTCAGTTAAACAGTCACCAAAAGAGCAGCCACCAATCTGTGTTGCACACGTGTCAGGCGTGCGATAAAGTGTTTAAGAACACCCGTAGCTATAAGGCGCACATGGAGATTCACCAGAATAAGGAGTACGTTTGTGAACTGTGCTCGAAAGTGTGTGCTAGCAAACACGTTCTGTCAAAACACCTTTGGGATCACAACCAGATCGGGAAGCACATGTGCGAAATTTGCGGAAAAACGTTTTGCTCAGCCGCAGGTTTAGGTAAGCATTTTTATAATCACACTGGCGAGAGACCTTATAAGTGTGCTAGTTGCGAGAAGACTTTCACCAATGCAACTGCGCGAAGATTACACGAGAAGACGCACACCGACGAGAAGTCGCACAAGTGCCGATTTTGCGAGAAATTTTTCAGAGCGGCTAGAAATCTGAAGATACATATGCGCTTGCACACCGGGGAAAAACCCTACGAATGTTCAATTTGTAAAAAACGATTCATAAGCAGTACCTTATTGAATAAACATCGAAGGAATCATCCGTCGACgTCCCTGGTGCAAGTCAAGTCTACTGGTACTAAAAGTAGAAAATCCCCAAAGAAATGCCCGATTTGCGCGAAAGTTTTTACCACGAAAAATAACTTGGGTTTCCACTTAAAGACCGTCCACGCGGAGGGTGATTACCCTTGCGACGAATGCGGAAAAGTTTTCAAGTGCGAAGCTTACCTGAGCAGTCACAAGAAGACCATGCATCATTCCAGATCGGATTTGATTTGCAAGATTTGTAATAAGAGGTTTTCGCGCAAACAGTATCTGACCGTTCACATCATCGATAAACACACGAAGGAATATAAGTTTAAGTGCGATATATGCGATCGCGGTTACCTCACCACAGGCCAGCTCAATAGACATCGGAGGACCAGTCACCCATCGGAATTACCCAAATGCCAAAAGTGTGATAAAGAGTTTAAGAATGCCCTTAGCTTTAAAGCGCACATGAAGATTCACGAGGACAAGGAATTTGTTTGCAAGCTGTGTTCCAAAGTGTGCGCGAGCAAACACTTATTGACCCAACACCTTTGGAATCATAGGCAGGTCGGAAAGCACATGTGCGAAGTTTGCGGGAAGACGTTCTCCTCGATGGGGTGTTTGAGCGTGCATTTGCCCACCCACTCCAAGGAGAGGCCTTATAAGTGTGGTACCTGCGAGAAAACCTTCACCACCGCCTATGCGCTGAGGTTACACGAGAGGACTCACACCGAGGAGAGGTCCTACAAGTGCGCATTTTGCGAGAGGTTTTTCAGGTCCCAAGAGCAATCTGACCTGGACGAAGAGTTTGACGTCACCGGATACGAATGCGAACTGTGCTGCAACGTTTTCGCCACCAGAGGCGACTACCTGGGACACCACACCAAAGGCGATTACCTCCTCTGTTGTAGTTGCGAAATGGTGTTCACCAGTACGGCTGAGCTGTTCCAACACAAAGAGAACCATCGAGCAGAACAGGTCGTCATTGAACAACCGGAAGACGAAGTTCAATTCGACGAGTATACTGAGGAAGTGGAAGCGGTCCTCAACATCCCAGCCGGCGATGAAGGAACGGCCATAGGCTCCACGAACGAGCTCCTGTATATTTTGGACGATTCCCAGTGCGTTAACGAGGTTATCATTGAGGAGAGTGACAACCAGCAGCAGCAGAGGAGTTACAGCAAGCCGGATAATTATTCGATAGTGCAAGTCGATCACGGCTATATGATACCGAGCGTGTTCAAGGGACAGTTGGAGACACGCAAACGCGGTAAGAAAAGGGGAGGGTCGCAAAGCGACAGCGATGAACCTGAGTCGAGGCCTTCGACCAGCCGACGAGTGTTAACCACACAGAGAATCCGTCAACACCCGGTCAGGAAGAGGCACGAATTACCAGACTTCTCCGCTACAGATTACCTGGTGTTGACTCCCAACGAGGAAGTCGATATTACGCACTATAAGTGTCGGCGTTGCGAGCAATTGTTCATCAATAAATTCGTCTTCTTCCGGCATATTGAGAAGGGGAAATGCTACGTTAATAGTTGCGACGTGTGTCAGGCGGACTTCGAGAAGAACAGCCAGTTTTACGAGCACTACGTGGTCGAGCACACCGATCGGGCCATCTGCCATTTTTGTTTTAGAACCTTCATGTACGAGAAGAACGTTAAGGAGCACATGTTGAGACATCTGGATCAATTCAGGCACCGTTGCGAGGAGTGCAACAAAGGATTTTATACTGTGCGGGAGTATAGGAACCACTACAAGAATAGACACATGGGGATCAGGCATAGGTGTGAAGAGTGCGGTAGATCATTCGCGGACGAATATTACTTTAAGAGACATATAGCCACGCATGCCGTGAAAAACCTTAATGTGGCAGGATCATAG
Protein Sequence
MEATLDIENFVKCEQNVDIKIEETEACTCDECRGLFVPEQDLVSEKTGRREYKCEDCDEVFKFWKPFAEHRKEIHLGDDDYTCEECEKVFKSLSHYYGHVKGVHEKDPNYVCDICGKCFAKTYAMVRHRIVVHTKEFKYKCSHCDRGFIGRAEFEVHERSHTERHSCGQCEKIFKNKTCLKQHLATHQPGYVAKQYVCEFCLKVTSSRGGLYNHIRLHHKQTKYICEICGLALSTSVGLTDHKRIHSGEKPFVCGTCGKAFAVKNKLVIHIRSHTKEKPYKCEECGKAFAHRKTLTLHSSEHTGEKAYPYQCLLCEKRFVSKRSLQFHLKNHQYPVEVILGLPDDANAQNWIKCEENVETKIAASVACTCDKCSEVFVSRRALIRHKRDLHTNRHEYRCEDCEKVFKFWKAFARHRKEVHIGGDDYKCEECGKVFKNLKNFYGHVKGSHDKNLKYVCDVCGKGFARNHTMVRHKVVIHTKEFKYECYHCNRGFLGRAELKAHERSHSERYPCDKCNKTFKKKASLKEHLIIHEPSYVPQLHVCQLCSKGFPSKSGLYNHLKSYHEQTKYVCEICGLALTTAVNLVNHKRIHSGEKPFVCDTCGKAFAVKKKCLVQDNSGNSRSKDFTNKCPVCSKVFTKKNSMDLHLKFVHQKGNYPCDECGKMFKCERYLSNHKKNAHQFRPNLVCEICSKQFSCKYYLSIHMINQHSKEYNFKCDVCDRGYLTMSQLNSHQKSSHQSVLHTCQACDKVFKNTRSYKAHMEIHQNKEYVCELCSKVCASKHVLSKHLWDHNQIGKHMCEICGKTFCSAAGLGKHFYNHTGERPYKCASCEKTFTNATARRLHEKTHTDEKSHKCRFCEKFFRAARNLKIHMRLHTGEKPYECSICKKRFISSTLLNKHRRNHPSTSLVQVKSTGTKSRKSPKKCPICAKVFTTKNNLGFHLKTVHAEGDYPCDECGKVFKCEAYLSSHKKTMHHSRSDLICKICNKRFSRKQYLTVHIIDKHTKEYKFKCDICDRGYLTTGQLNRHRRTSHPSELPKCQKCDKEFKNALSFKAHMKIHEDKEFVCKLCSKVCASKHLLTQHLWNHRQVGKHMCEVCGKTFSSMGCLSVHLPTHSKERPYKCGTCEKTFTTAYALRLHERTHTEERSYKCAFCERFFRSQEQSDLDEEFDVTGYECELCCNVFATRGDYLGHHTKGDYLLCCSCEMVFTSTAELFQHKENHRAEQVVIEQPEDEVQFDEYTEEVEAVLNIPAGDEGTAIGSTNELLYILDDSQCVNEVIIEESDNQQQQRSYSKPDNYSIVQVDHGYMIPSVFKGQLETRKRGKKRGGSQSDSDEPESRPSTSRRVLTTQRIRQHPVRKRHELPDFSATDYLVLTPNEEVDITHYKCRRCEQLFINKFVFFRHIEKGKCYVNSCDVCQADFEKNSQFYEHYVVEHTDRAICHFCFRTFMYEKNVKEHMLRHLDQFRHRCEECNKGFYTVREYRNHYKNRHMGIRHRCEECGRSFADEYYFKRHIATHAVKNLNVAGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-