Caur001730.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cetonia aurata
Gene Symbol
-
Assembly
GCA_949128085.1
Location
OX421882.1:4339709-4364008[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 2.5e-05 0.0047 18.9 0.2 1 23 284 307 284 307 0.95
2 38 0.00021 0.038 16.0 0.2 1 23 313 336 313 336 0.94
3 38 0.0011 0.2 13.8 0.9 1 23 342 365 342 365 0.96
4 38 0.00067 0.12 14.4 0.4 1 23 371 393 371 393 0.98
5 38 7.5e-06 0.0014 20.6 2.0 1 23 398 420 398 420 0.96
6 38 0.068 12 8.1 0.9 1 23 429 451 429 451 0.97
7 38 4.3e-06 0.00078 21.3 0.1 1 23 456 478 456 478 0.97
8 38 3.8e-05 0.0069 18.4 0.8 1 23 484 506 484 506 0.98
9 38 1.8e-06 0.00033 22.5 0.3 1 23 512 534 512 534 0.99
10 38 0.05 9.2 8.5 4.8 1 23 540 562 540 562 0.97
11 38 5.6e-06 0.001 21.0 1.1 1 23 586 609 586 609 0.96
12 38 5.9e-05 0.011 17.7 1.5 1 23 615 638 615 638 0.96
13 38 0.00015 0.028 16.4 1.0 1 23 643 666 643 666 0.97
14 38 0.42 77 5.6 4.0 1 23 672 694 672 694 0.98
15 38 0.00066 0.12 14.4 1.7 1 23 699 721 699 721 0.96
16 38 0.00075 0.14 14.3 0.4 1 23 730 752 730 752 0.98
17 38 8.8e-05 0.016 17.2 0.4 1 23 757 779 757 779 0.98
18 38 0.00013 0.024 16.7 0.1 1 23 785 807 785 807 0.98
19 38 7.8e-07 0.00014 23.6 0.3 1 23 813 835 813 835 0.99
20 38 1.9 3.5e+02 3.5 2.1 1 13 841 853 841 854 0.90
21 38 2.1e-06 0.00039 22.3 1.0 1 23 874 897 874 897 0.95
22 38 0.00018 0.033 16.2 0.2 1 23 903 926 903 926 0.97
23 38 0.0035 0.65 12.1 0.2 3 23 933 954 931 954 0.96
24 38 0.033 6 9.1 1.8 1 23 960 982 960 982 0.98
25 38 9.2e-06 0.0017 20.3 0.9 3 23 989 1009 987 1009 0.97
26 38 0.0066 1.2 11.3 0.2 1 23 1018 1040 1018 1040 0.98
27 38 1.4e-06 0.00025 22.9 0.7 1 23 1045 1067 1045 1067 0.99
28 38 0.0003 0.055 15.5 0.2 1 23 1073 1095 1073 1095 0.98
29 38 1.8e-06 0.00032 22.5 0.7 1 23 1101 1123 1101 1123 0.99
30 38 0.0069 1.3 11.2 0.2 1 23 1188 1211 1188 1211 0.97
31 38 0.0001 0.019 17.0 6.0 1 23 1217 1239 1217 1239 0.99
32 38 0.00011 0.02 16.9 0.1 1 23 1248 1270 1248 1270 0.99
33 38 0.13 25 7.2 0.2 1 17 1276 1292 1276 1293 0.92
34 38 0.00014 0.026 16.5 0.2 1 23 1315 1338 1315 1338 0.96
35 38 0.00021 0.038 16.0 0.2 1 23 1344 1367 1344 1367 0.94
36 38 0.00047 0.086 14.9 1.5 1 23 1373 1396 1373 1396 0.95
37 38 0.73 1.3e+02 4.9 2.2 1 21 1402 1422 1402 1424 0.95
38 38 1.9e-05 0.0034 19.3 2.7 1 23 1427 1449 1427 1449 0.97

Sequence Information

Coding Sequence
ATGGACGATGAAGATTTCATGCATCTAATTCtattagaagaagaagaagaagaagatgacattttaaaacagACTTTATTGCAAACAAGGTGTGAAACACATGATATATTCAAAAAACGTAGAGCGGAAGGTTATTATAAGCTTCTCATTAATGCTCATTTAAGGGAAGATGAAGAAAAATTTAGAGAATTTTTACGATTAAATCCTGAtcaatttgattttgttttatcaCTTATTCAAGATGATATAAAAACACCCGGAACAAATTTCGTGCAACTTCCGATAACTGCAGAAGAAAAGTTGGCATTAACTTTAAGATATCTGGCTACTGGAGAGACATTTAGATCGCTGGCATTTGCGTTTAGAATTTCACCCAgctatatttctattattatcagAGAAACATTATCGGCAATCTGTAACCATTTAGTACCAATATTTATTCCCACGCCGTCAACggaaacattaaaaagaaatgcaaTTGAGTTTTGGGAACGATGGAATTTCCCCAACTGTATTGGAGCTATAGATGGCAAAAACATAAGAATCTTCTCGCCAGCTAAATCCGTTGATGCaaactataaatttattgctttgGATGTTGGATCGTACGGGAAAGAAGGCGATagttcaatttttaataaatctgcAATTGGACGGAAAATATGTTCAGATGATTTTTTTCCATCAGACCAAGTCCTACCTAATTCAAACAAACTAATGCCATATGTAGTCGTGGGGGATGAAGCATTTCGCTTGCACAAACACATAATGAAACCATTTAATAGgaATTACGCGAAGATCGAAGATGCTAAAGCTGCAATTTCCTCATCTACCAGTAGtcgtaaatatatatgtaaggaATGTGGACAAGCCTTTAGGTTCTGGGGACAATTAGCACAACACAGGAAAGAGGTACATGTTGGCGGTGACGGTTATAAATGTGAGGATTGCGGAAAGATCTTCAAGAATCTAAAATATATGGCCGGACACGTGAAAGGCATCCACGAGAGGAATCCGGAATACATTTGCGATTTCTGCGGCAGATGTTTTCCGGCCAAGAAAGCATTTGCCAGACACAGGGCGATGGAGCACACCAAACAGTTCAACTACAAATGCGATCAATGCGACCGCGGCTTTCTGGTGCAGAGCGAATTGAGGAATCACCTAGAGAGCCACAGCACCGATCAACACGCTTGCAATCAGTGCAATAAGGTGTACAAGAACAGTTCTGGCCTCAAGAAACATCTGGCGACGCACCAACCAGATTACGTCAAGAAGAAGTACGTTTGTGAGCCCTGTTCGACTGTCTATTCGAGCATTAACGCCTGGTGTAAGCACATGAAGCGTCACAGAGGGAAGATATACATGTGCGAAATCTGCGGCAAAACGTTCACTAATCCCTCGGGCTTAGCCGGGCATAGTTTGACGCATTCCGGGGAAAGGCCTCACGTTTGCCGTATTTGCGATAAGAGTTTTGTATTAAGGAGAGGTCTTCTAGTCCACATTCGAACCCATACCAAAGAAAAACCTTATAAGTGCGAAGAATGTGGATTGGCTTATTCTCAATCGGGTACTCTGAAAATACATTTACGGAAGCATTCTGGCGAGAAGCCTTATCAGTGTTCGTTTTGTGAAAAGAGCTTCATAAGCAGATGCTTACTGAACTTCCACTTAAAGAACCACCGGTACCTGACGGATGTTAAGGTTGACGTTCCTGAACCTGCTGTTTCTTCGTGCAGCATTGGTCAGGGATTCACGTGTAAGGAATGCGACAAGGCGTTCAGATTTCGAGGACAATTAGCACGGCACCGAAAAGAGATTCACTTAGGAAGTAACGACTACAAATGCGAGGACTGCGGAAAGGTCTTCAAATCCCTGAAATGTCTGGTCGGTCACGTGAAGTACGTCCACGAGAAGACGCCTTACGTATGCGATTTATGCGGGGAATGCTTTTCTGCGAAGAGGCAGTTTGCGAAACACAGAGCCACCGGCCACACGAAACAATTCAAATACACCTGCGACAGATGCGATAGCACCTTCTTGAAGCGGTGCGAATTGAAACAGCACCAAGAGAGTCACAGCGCCGACCAATACGTGTGCAACAAATGCAACAGGGTATATAGGAGTAGATCTAGCCTCAAATTTCATTTGGCGTCGCACCAACCCGGTTACCAGAAGAAGAAGTACGTCTGTGAATTGTGTTCGAAGGTGTATTCGGGTGTCACTAGTCTGCACGCGCATATGATACGTCACAAGGGCAAGGTGTACATGTGCGAAATATGCGGTAAAACGCTTACTAGCTTTAAGAGTTTGACAGATCATGGACGCGTGCATTCCGGCGAAAGACCTTACGTTTGCGATACTTGCGGCAAAGCTTTTGTTTTGAAGAGGGGTCTCTTAGTTCACACTTTGACCCATACTAAGGAGAAACCCTATGAGTGTAAAGTATGCGGGCAGGCTTTCTCTCAATCGGGTACTCTGAAAATACATGTACGAAAGCATTCAGGAGAAAAGCCCTATCATTGTTCGTTTTGCGAAAAGAGCTTCATCAGCAGGTACCCGGCGGATATCAAGATATGCGAAAGTGTAGTCTCTTCATGTGCTAGCGTTCAGGGATTCACGTGTAAGGAATGCGGGAAGGTCTTCAGATTTCGGGGACAGCTGGCACGACATAGAAAAGATGTTCATCTGGGAGATGACGACTTCAGATGTGAGGACTGCGAGAAGGTGTACACGTCCCTTAAGGTTTTGGTCGCGCACCAGAAAAGCGTCCACGAGAAAACACCCTCAATTTGCAACTTGTGCGGCGAATACTTTGCCGCCAAAAAGGAATTGGCTAGGCACAGAACCACGGACCACCCTAAAGAATTCAAATACAAGTGCGTTAGATGCGACTGCGGTTTCTTTGAGGTGGCCGAACTGAAGAAACACCAGAAAGGTCACAGCGCCGACCGACAAATTTGCAATAAATGCGGCGTAGTGTACAAGAACAGATCTAGCCTCTTGAAACATTTGAAGACGCACGAACCCGATTACGTCAAGAAGGAATACGTCTGCGATTTCTGCTCGAAGGTTTACGCCGGCATTAATGGCCTTTACAAGCACATGAAAGGCCACAAGGGGGAGTTGTACGTTTGCGAGATCTGCGGCAAAACGATTACCACCAGTTCAAGTTTTAAGGAACACCAACGCATGCATGCCGGCATAAGACCCTACATCTGCGGTACTTGCGGAAAGCGTTTTGCACTCAAGAAGGGCCTATTGGTTCACACTTTGACTCATACCAAGGAGAAACCTTATAAGTGTCAAGAATGTGGGAATGCTTTCACGCAATCCGGTACTCTCAAAATACATTTACGGAAACATTCTGGCGAGAAGCCATACCAGTTTACACCATCATGCCTCAAGAAAGAGGATCTAGAAGAGGGTCCTTATATCATAACACCAGTACATATTAAGCAAGAACACTCGCAACAAAACAGGAATAAGTTAATGCCAATATGTGCTAAGGAGTTATGGGACTGTCATCAGGGGAAAATGGAACCTCTTAGTGCAGCCTACACTTGTAAAGTGTGCGGAAACGGTTATAATAACAAAGAAAGCTACGACGAACACGTAAAGGTCGGTCACGAAAAGGGTAAAATTTACAAATGCGACTTTTGCAGCAAGCAGTTCTCCAGTAAGCGCTACTTGTCCAAACATAGAAGAAAGCACACGAAAGGCGATGGTATAGGACAGTATAAGTGCGAAGTGTGCGGGAAATCTTTGGCTTCTCCCCAAAGCTTGGACGACCATAAACGCATACATACCGGAGAGAGGCCCTTCATTTGCGCTCTTTGCGAGAAAAGCTTTACAGTGAAAGGATCGCTTCGatacAAGACGCATGCCAAACATGATAGTTTAAAAGCTAATGTGTCTTCAAAAACGGGTCGTGGGACATACACTTGCACGGACTGTGGCGATATCTTTACGTTCTGGGGACTATTGCAGCGACATAGGAAAGAGGCCCACCTGGGCGGTGACCATTATAAATGTGAGGATTGCGGAAAGATCTTTAAGAACCTGAAATATATGGCTGGACACGTGAAGGGCATCCACGAGAAGAATCCGAACTACGTTTGCGATTTTTGCGGTCAATGTTTCCCGTCCAGAAAGGGATTTGCCAGACACAGGGCCATCTATCACACGAAAGAATTTAAATTCAAGTGTGACCGATGTGAACGCGGGTTCCTGGTGAAGAGTGCATTGCTATTACACCAGAGATGTCATGAGCGATACACCTGCAGCAAGTGCAACAAGACGTTTAAGAACGGGAAATATCTCAAGAATCACATGGCACTGCATGAACCTGATAATTAG
Protein Sequence
MDDEDFMHLILLEEEEEEDDILKQTLLQTRCETHDIFKKRRAEGYYKLLINAHLREDEEKFREFLRLNPDQFDFVLSLIQDDIKTPGTNFVQLPITAEEKLALTLRYLATGETFRSLAFAFRISPSYISIIIRETLSAICNHLVPIFIPTPSTETLKRNAIEFWERWNFPNCIGAIDGKNIRIFSPAKSVDANYKFIALDVGSYGKEGDSSIFNKSAIGRKICSDDFFPSDQVLPNSNKLMPYVVVGDEAFRLHKHIMKPFNRNYAKIEDAKAAISSSTSSRKYICKECGQAFRFWGQLAQHRKEVHVGGDGYKCEDCGKIFKNLKYMAGHVKGIHERNPEYICDFCGRCFPAKKAFARHRAMEHTKQFNYKCDQCDRGFLVQSELRNHLESHSTDQHACNQCNKVYKNSSGLKKHLATHQPDYVKKKYVCEPCSTVYSSINAWCKHMKRHRGKIYMCEICGKTFTNPSGLAGHSLTHSGERPHVCRICDKSFVLRRGLLVHIRTHTKEKPYKCEECGLAYSQSGTLKIHLRKHSGEKPYQCSFCEKSFISRCLLNFHLKNHRYLTDVKVDVPEPAVSSCSIGQGFTCKECDKAFRFRGQLARHRKEIHLGSNDYKCEDCGKVFKSLKCLVGHVKYVHEKTPYVCDLCGECFSAKRQFAKHRATGHTKQFKYTCDRCDSTFLKRCELKQHQESHSADQYVCNKCNRVYRSRSSLKFHLASHQPGYQKKKYVCELCSKVYSGVTSLHAHMIRHKGKVYMCEICGKTLTSFKSLTDHGRVHSGERPYVCDTCGKAFVLKRGLLVHTLTHTKEKPYECKVCGQAFSQSGTLKIHVRKHSGEKPYHCSFCEKSFISRYPADIKICESVVSSCASVQGFTCKECGKVFRFRGQLARHRKDVHLGDDDFRCEDCEKVYTSLKVLVAHQKSVHEKTPSICNLCGEYFAAKKELARHRTTDHPKEFKYKCVRCDCGFFEVAELKKHQKGHSADRQICNKCGVVYKNRSSLLKHLKTHEPDYVKKEYVCDFCSKVYAGINGLYKHMKGHKGELYVCEICGKTITTSSSFKEHQRMHAGIRPYICGTCGKRFALKKGLLVHTLTHTKEKPYKCQECGNAFTQSGTLKIHLRKHSGEKPYQFTPSCLKKEDLEEGPYIITPVHIKQEHSQQNRNKLMPICAKELWDCHQGKMEPLSAAYTCKVCGNGYNNKESYDEHVKVGHEKGKIYKCDFCSKQFSSKRYLSKHRRKHTKGDGIGQYKCEVCGKSLASPQSLDDHKRIHTGERPFICALCEKSFTVKGSLRYKTHAKHDSLKANVSSKTGRGTYTCTDCGDIFTFWGLLQRHRKEAHLGGDHYKCEDCGKIFKNLKYMAGHVKGIHEKNPNYVCDFCGQCFPSRKGFARHRAIYHTKEFKFKCDRCERGFLVKSALLLHQRCHERYTCSKCNKTFKNGKYLKNHMALHEPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-