Basic Information

Gene Symbol
GIP_1
Assembly
GCA_949128085.1
Location
OX421882.1:48722965-48747256[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 1.1 2.8e+03 0.1 0.0 3 16 87 100 86 102 0.91
2 7 0.26 6.4e+02 2.2 0.1 23 46 167 192 166 192 0.74
3 7 9.7e-06 0.024 16.4 0.2 3 45 200 244 198 245 0.92
4 7 1.3e-07 0.00031 22.4 0.0 1 45 251 299 251 300 0.94
5 7 3.6e-10 8.7e-07 30.5 0.0 1 45 307 351 307 352 0.98
6 7 1.2e-06 0.0029 19.3 0.1 2 44 360 403 360 405 0.93
7 7 3.1 7.5e+03 -1.3 0.1 1 9 1514 1522 1514 1526 0.86

Sequence Information

Coding Sequence
atggaAAAAGATATTGAAGATATTAGAAAGCTTGATGCTGCTATAAAAGAAGAGCATGACTGCAATACTTTTCGAGATGAATTTGATGACTTTATTAATCACAGCATAAGCGATGACGAAGAACAATTTGAATGTGTAGATGAAGACGAATTAATACAAATTGAAGATGCTATAGATAACATAGTTGATGACTCTGATCATAATTTGTATCACAGTgttgaaaatttaaagtttaGTACTGATTTGAACTTGTTATCGAGGTGGACCCTTGAAGATCAAATAATTCTGAAGCGggcaattatttttaactaCACCAATGATTTGGTGGAGAAGTATGAATCAGAGCTAAACAGTTTAAAATTTGCCGAAAAGAATGCCAATAACGAAGAAGCTGCATctatacaaaaacatattttggaaattACGGATAAACtagcaaaattaaaagaaaatcaagatCCAGCTCCGCCTCCCCTTGACAGCAGTGCTGAGATAAATTGGATGACAATATCCAACAGTGATTTTGCGGGTCGTCATTCACCACAAgcttgtaaagcattttggaaCATTTACTTACATACATCTATAAATAAAGCATATTGGAGTGATAAAGAAAACAATGAGATTCAAAAGTTGGCAAAAACGTACAACTTTCAAAATTGGGAAGAAATAGCaatgaaactaaaaaataatcGTAGTGGATTTGCTGTATGCGTTCATTATTATACGACCCTCAGCGATAAGTTTAGAAAGAACAGATTTGATCTTGAAGAAGATCAGTTCTTAGTAGATGTAGTGAATGCATGTCGCATAGGAAATTATATCCCTTGGTCCAAAGTCTGCCACTATTTTCAAAATAGATCACGATCACAGCTGTACCAtaggtataaatataatttagaattttggAACATGAAGAAAGGACCTTTTTCATGTGCAGAAGACGCCTTATTAGGGCTCTTAGTGCGCAAATTCGGAAAAGACTTTACACGATGTTGTAAATACATACCAAACAGATCTCCGTCTCAAATAGCCCATCGTTACAACAATTATATAGCATTTGATAAATTAGACCTAGGATGTTGGAGCTTGGCAGAAGATGAAGCTATAATGAATCACGTGGCTGAAAATGGCGAGAAGGCTTGGTCGAAGttattttctattgtaaaaacgaaaaataggACGCATTTGCGGTTAAGATATTTTTACTTAAGGAAGTGGTTGCAAATGAACAGCGATAAGCAACTTAGTGAAATACCACGTCGCATAAAACGTTCACGTCGCTCTGATGCAGTTTATATGGTAAaaagttgtattgaatattttagcaacagtacGCAAATTCCAACGCTATTTGAGATTGGTGAACATTTACAAACTTTAGGACAAGTACCTAGTGCAAGTTCTACTATGACACGACCGTTACAGTGTCGTATTGTAAGCGATAACATTGATAAAGAATTAATACAATATTTCCAAAGTACctgcaaaattaaaacaagtaaAAGTATATCAGCACAAGAAGTGCAGCACATTGTCGGTGTTACTAAAACATTGATGTCGATATTCGACATTGAGCTTACCATTCCAGATTGTAATTCTTTGCAGAATAATCCAAAATTAGATATTTTAGATAAGGAAATATTAACCTTATTATTTACAGATAAAAGTCGAACAGATAACACAACAATGGAAACTATAAGGGGAGACAGCTTGAGTGAGACTTGTGATGAACAATCCACATCTAAAACGACACCAACGCAACCAAAAACTTATACTAAAGCAAAGCGTAGCAACGATACTGAAGTAAATAAACAGAACGCAAAGAAAGCCAGGACCAATTGTGATAGCAATGAAATAAAAGAGTTACAGGAGGATATTCATAAACTTGACAATCTGTTGATGTCAGAGCTTGATGAACAGAAAAAAGTTTTGGAGGTTATCTCACAAGTCCCGCCTACCACAGAAACGGAATTAAAACGCTTTAAGGAAAACGACATTATTGCGCGTAACATTATTGTGCAGTGTTTAGCCGATAACATGTTGGAAAcgataaaaactaagaaaacgAGCAAAGAGGTAATGGAAACTTTCAAGTCAACCTACGAAAAGAAAGGAATATCTACCCAGGTCCAACTACAGAAAAAACTGAGAGAATTGAAACATACAGGTGAGGTTAAGCTGAATATTTTTCTCACGGAATTTGATCAAACAGTTTGCGAACTAAAAGCTGCGGGTGGAAAAATTGAGAACAAAGAGTTAATCTCACAATTACTATCAGCAATGCCAGAGTCTTACCAGGGTGTAACTACAGCAATCGATATAATGTTCTGTCAAAACGAAGATAGCATAACAATtgattttgtgaaaaataagcTTCTTATGGAGGAAGCGAgacaagaaaaaggaaaaacagaaGGTAAAACATCCAAAGATGTTGCTTTTATGAATTATAGACATAAAAAATGGAattcaaagaagaaaaatagTCAAGGAAATAGTTCAGAAAATGTTAAAGCCCCGGATTTTCCTTATAGATGTCAAAGTTGTGGAATTATAGGACATAAAACATATCAATGTCCGAATAGACAGATAGATTACTCAAAAAGAGCAGGAAATTCAAGACAAGTTCATGCAGCTGAAGATGATGCAGCACCTGAGTCTGAAATTTCATTTCTATCGACTGAATATACAATGCCAGCTGAGTGTACAAATAAGAAGGACATTAGGTTTATAATTGATAGTGGAGCAAcgcatcatttaataaataatgacatAGAGCAATTTCTGGTAAATAAAAAGACAATAAGTTATAGTATAAATGTTGCTAAAAAGGGAGAGAATATAACAGCTGAAAAACAAGGGGACTTACGACTGCAGGGCGAAGATGGAAGAAAAATACTAATGAAAGATGTATGGGTATgcaaaaatttaatgcaaaacttACTATCAGTAAGGAAATTAGAGGAGAGTGGTTTTCAAgtgttatttaaagaaaaaaaggtaaTTGTATCAAGAGGCAAGGACATAATATTAAGAGGTAAACTCTATGGAAATCTGTATGTTGTGAATTTAGGAGTTTGTGCTAGTGAAGCAAATCTTACATCTGCGGATCAAACACTAATGCATCGAAGAATGGGACATTCTGCACATTATCCGCATTCAGGTCTgtgtgaaatttgtttacaaggTAAGCAAACAAGATTACCTTTTTATAGTTTAGAAGAGGATAGAAAACCGAAAAGGATTTTAGAAGTTGTGTCAACTGATGTTTGTGGCCCAATAAATCCAAAAACTTATGATGCACATAATTTAATACCTAAAGAAGATAGATATTCAAAACTTGATCCTAGGAGTGAAAAATTGATTATGATTGGATACACAGACAATGGATATAGGCTATGGAATCCAGATAGCAGAAAAGTTGTGCTAGgaagaaatgttatttttgatGAAGAACAGCATGATACTGTAATAATAAACAGTggaaaagaaaatgcaatagAAAAGAATGAAGAAATAGAAAAGAGAAATGAGGAAAACCAAACTGAAATGGATGTCAGAGCAACTCGAACAAAAAGACTACCAAAATATCTTGAGGATTATGAAATCGATAGCGAATTGGAAGTGAATTTGATAGCAGCCTTATCAGCTGGAAATTTGCTGTCAGATGTCCCTCAAAGCTATGCAGAAGCAGCGAATGACATCGGCTGGAATAAAGCAATTAAAGAAGAATTGAACTCACTTCATCAAAGTAATACTTGGGAATTGGTGCCACCTCCAGATAATGTGAAAATAATAGACTCAAAGTGGGTGTTTCGTGAAAAGCAAGTGAATaacaaaagtgttaaaaagGCGCGATTGGTGGCTCGCGGTTTTCAACAATGCGAATTAAGTGAGAGTGTATATGCACCAGTGGCGCGAATGGTCACTCTTCGAATGTTACTGAATTTATATCTACAGCACGACCTACATATTCAACAATTGGACGTGAAGTCAGCATTTCTCTATGCTGAACTGGAGAATCCTGTGTATATGTATCAACCTGAAGGACAAGAAGGAACAGACCCTAATCTAGTGTggaaTGCAGAACTTATAAATTTGAGTCCAGAAAAGTTAAAGAAACGTTTTATTTGCGAAcaacattttacaaaaaaatttttcattggACGGAAATTGACGCAAAATGCTGTTCCAACACCATATGTTCATGAAGATGTAACGTTGAAAACTACAGAGAAAAAATATGGAAGTGAAAGTGTTACAGCTATTGAGGATCAGTATGAACCCCAACCATCTTCTTCCCAGCAAGAGATTCATATTTTAACCCCTAAGAAACGAAAAGTGGAGCATTTAAAAAGTTCAATGGGAGAACTTGATATAAACAGAATTATATCTATGCCAAGTACATCAAGACAAGGAGGAAGATTGACCATTGACAGTGGAAAACGGAAACCCAAAATAACAACTCCTAGACCTCTAAAATACTTAGCAACCTTTCCCAAGGCATTAACAACAATGCAAATACATCATGCACCTAGAACACCCTGGTCAGCGGAGGAGAAAAGTACTGCTTTAGCCATGTATTATAAAGGTCCTGCGATGTACAAATTTTTACGAAGTAAGGGAGTTATATTGCCTGCTCCTTCAACTATTGTCAATTGGATCAAGCAATGTGATTGTAAACCTGGGATTAATAGGAAGTTACTGAAAGCTGTAGGGATTAAACTAGATACTATGTTGGCCAGACATAAAGAATGTGTGCTGATCTTTGATGAGATGGCGATTAAGAAATCCCTAGAGTATTCGAAGCGCAAGGATATTCTGGAAGGCTTTGAAGATCTAGGTGAATTTGGTAGAAAATCAGTAATGGCGAAACAAGTTTTAGAACTTCTACGGAGCTCGGGCGACACTGCGATCATAGCAGCAGACAGCGCGCAAACTACGACCTGCAAAGATCAAACAGCGCAGGCAGCCACCAGCAGTGAGAAATTGGTCGCACCCATGCCACGCGTGGAGAGCGCACTAACGACACACCCTGGCAGGCACCCTATAGTGGAGGGTTGGGTGCCTGAGCTGGAATAG
Protein Sequence
MEKDIEDIRKLDAAIKEEHDCNTFRDEFDDFINHSISDDEEQFECVDEDELIQIEDAIDNIVDDSDHNLYHSVENLKFSTDLNLLSRWTLEDQIILKRAIIFNYTNDLVEKYESELNSLKFAEKNANNEEAASIQKHILEITDKLAKLKENQDPAPPPLDSSAEINWMTISNSDFAGRHSPQACKAFWNIYLHTSINKAYWSDKENNEIQKLAKTYNFQNWEEIAMKLKNNRSGFAVCVHYYTTLSDKFRKNRFDLEEDQFLVDVVNACRIGNYIPWSKVCHYFQNRSRSQLYHRYKYNLEFWNMKKGPFSCAEDALLGLLVRKFGKDFTRCCKYIPNRSPSQIAHRYNNYIAFDKLDLGCWSLAEDEAIMNHVAENGEKAWSKLFSIVKTKNRTHLRLRYFYLRKWLQMNSDKQLSEIPRRIKRSRRSDAVYMVKSCIEYFSNSTQIPTLFEIGEHLQTLGQVPSASSTMTRPLQCRIVSDNIDKELIQYFQSTCKIKTSKSISAQEVQHIVGVTKTLMSIFDIELTIPDCNSLQNNPKLDILDKEILTLLFTDKSRTDNTTMETIRGDSLSETCDEQSTSKTTPTQPKTYTKAKRSNDTEVNKQNAKKARTNCDSNEIKELQEDIHKLDNLLMSELDEQKKVLEVISQVPPTTETELKRFKENDIIARNIIVQCLADNMLETIKTKKTSKEVMETFKSTYEKKGISTQVQLQKKLRELKHTGEVKLNIFLTEFDQTVCELKAAGGKIENKELISQLLSAMPESYQGVTTAIDIMFCQNEDSITIDFVKNKLLMEEARQEKGKTEGKTSKDVAFMNYRHKKWNSKKKNSQGNSSENVKAPDFPYRCQSCGIIGHKTYQCPNRQIDYSKRAGNSRQVHAAEDDAAPESEISFLSTEYTMPAECTNKKDIRFIIDSGATHHLINNDIEQFLVNKKTISYSINVAKKGENITAEKQGDLRLQGEDGRKILMKDVWVCKNLMQNLLSVRKLEESGFQVLFKEKKVIVSRGKDIILRGKLYGNLYVVNLGVCASEANLTSADQTLMHRRMGHSAHYPHSGLCEICLQGKQTRLPFYSLEEDRKPKRILEVVSTDVCGPINPKTYDAHNLIPKEDRYSKLDPRSEKLIMIGYTDNGYRLWNPDSRKVVLGRNVIFDEEQHDTVIINSGKENAIEKNEEIEKRNEENQTEMDVRATRTKRLPKYLEDYEIDSELEVNLIAALSAGNLLSDVPQSYAEAANDIGWNKAIKEELNSLHQSNTWELVPPPDNVKIIDSKWVFREKQVNNKSVKKARLVARGFQQCELSESVYAPVARMVTLRMLLNLYLQHDLHIQQLDVKSAFLYAELENPVYMYQPEGQEGTDPNLVWNAELINLSPEKLKKRFICEQHFTKKFFIGRKLTQNAVPTPYVHEDVTLKTTEKKYGSESVTAIEDQYEPQPSSSQQEIHILTPKKRKVEHLKSSMGELDINRIISMPSTSRQGGRLTIDSGKRKPKITTPRPLKYLATFPKALTTMQIHHAPRTPWSAEEKSTALAMYYKGPAMYKFLRSKGVILPAPSTIVNWIKQCDCKPGINRKLLKAVGIKLDTMLARHKECVLIFDEMAIKKSLEYSKRKDILEGFEDLGEFGRKSVMAKQVLELLRSSGDTAIIAADSAQTTTCKDQTAQAATSSEKLVAPMPRVESALTTHPGRHPIVEGWVPELE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-