Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421886.1:7862640-7864457[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-07 6.6e-05 24.1 0.0 4 38 20 55 18 60 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-07	6.6e-05	24.1	0.0	4	38	20	55	18	60	0.90

Sequence Information

Coding Sequence: ATGGGACGTTACAAAAGAACCATTGGAAGCAGGAATTACTGCAATTATACAAAAGTACAATTAGAAGAAGCAGTTCGACTTATCAAATCGGGTGCAATATCTCAAAGACTGGCTTCCACAAGATATAAAATACCTCGAGCTACATTGCAAAATAAGATAAACGAAGATCACAGCAAAACTCCAGGCGGACAAACCGTATTGTTAGAGGATGAAGAAAGGAAAATCGAAGCACATATTTTAGCAGCATCGGCATATGGATTTCCCCTAGATGCACTAGATCTAAGAAAAATTGTGAAAGGTTATCTAGATCGAAAGGGCGTAGTCATCAGAAGATTTACAGATAATCTTCCTGGTACTGAATGGGTAAGACTGTTTTTGAAAAGACACCCGACATTGACACAAAGGTTTGCTGCAAATATAAAATCTGTCCGGGCTGCTATTTCACCTGATGttgttaatacatattttgacaatttagaAAGAGAGTTAGAGGGTGTTCCACCCTCAAATATTTGGAACTATGATGAATCCAACTTATGCGATGACCCAGGCAATAAAAAAGTTATCACAAAACGGGGTTGCAAATATCCTGAACGGATCCTCAACTCGTCGAAACAATCTACAAGTGTAATGTTCTGTGGAAATGCTTTAGGCACAGTTTTGCCCCCTTATGTAGTTTATAAGGCCAAAAATATGTATGACACTTGGGTGGAAGGTGGACCTGTTGGGACCCGCTATAATCGGTCAAAAAGTGGATGGTTTGAGGGCCCTATATTCGAGGACTGGTTTGAACACCTACTGCTTCCTGCGTTAAGGCGTTTAGAGGGACCCCATGTGGTGATAGGCGATAATCTTTCTTCGCATTTAAGTGTGCATGTTGTGGACCTTTGCTCCCAatatgatattaaatttatttgtttaccaCCTAACACCACACATATCACACAGCCACTTGACATCGCTTATTTTCGCCCGCTTAAAATGAAATGGAGGCAAATCATAACAAATTATAAACTAAGTGGAACAAACAGCACGATTCCAAAATCGGAGTTCCCGCGTCTGCTCAAATCATTGACAGATGCCTTATTGGAACCAGGAAAACAAACAGCCAGGAAAAAAAAGGTCAATATTATAGCTGGGAAGAGCATCTCAATCGAAAACATTGAAAAAGAACCAGTTGCGAGTCCTAGTGCTGTTCGCAAAAATCCCTCATCAAACCAAAACAAAAAGTCTAGAACGATTTCCAGTGATTCCGATAGCTCTGTTAACGTTTCTCTTCAATCCGAGGAAGAGCATAACTTCAATGAGCTTGATGAAGATGAGCCCATACATGACCTCGAAAGTGAAGATGAGGACACACACGAAAAGACTAGAAGTGGATGTAACGAaaaccataaaattaaaatcggccattttgttttgtttttattcgaaAAAAGAATTTATCCTGGACAGATTATggaaattaatgatgaaaaacAATATAAGATAAAATCTCTTGCTCCTAGTGGATTGCTTCAGTGGAAATGGCCCACGCCAGATGACATCATCTGGTACGCAGAAGACGAGATTTTGCAGACTATAAAGACACCTATCCCATCCAAAAGAGGTTTCTTCAAGATACCAGAAATCGAGAATTATTCTTAA
Protein Sequence: MGRYKRTIGSRNYCNYTKVQLEEAVRLIKSGAISQRLASTRYKIPRATLQNKINEDHSKTPGGQTVLLEDEERKIEAHILAASAYGFPLDALDLRKIVKGYLDRKGVVIRRFTDNLPGTEWVRLFLKRHPTLTQRFAANIKSVRAAISPDVVNTYFDNLERELEGVPPSNIWNYDESNLCDDPGNKKVITKRGCKYPERILNSSKQSTSVMFCGNALGTVLPPYVVYKAKNMYDTWVEGGPVGTRYNRSKSGWFEGPIFEDWFEHLLLPALRRLEGPHVVIGDNLSSHLSVHVVDLCSQYDIKFICLPPNTTHITQPLDIAYFRPLKMKWRQIITNYKLSGTNSTIPKSEFPRLLKSLTDALLEPGKQTARKKKVNIIAGKSISIENIEKEPVASPSAVRKNPSSNQNKKSRTISSDSDSSVNVSLQSEEEHNFNELDEDEPIHDLESEDEDTHEKTRSGCNENHKIKIGHFVLFLFEKRIYPGQIMEINDEKQYKIKSLAPSGLLQWKWPTPDDIIWYAEDEILQTIKTPIPSKRGFFKIPEIENYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00067809;
90% Identity: iTF_00067792; iTF_00067809; iTF_00067810; iTF_00067842; iTF_00067811; iTF_00067843; iTF_00067812; iTF_00067813; iTF_00067814; iTF_00067815; iTF_00067816; iTF_00067817; iTF_00067818; iTF_00067819; iTF_00067820; iTF_00067821; iTF_00067822; iTF_00067823; iTF_00067824; iTF_00067825; iTF_00067826; iTF_00067827; iTF_00067828; iTF_00067829; iTF_00067798; iTF_00067830; iTF_00067831; iTF_00067832; iTF_00067833; iTF_00307769; iTF_00067802; iTF_00067834; iTF_00067803; iTF_00067835; iTF_00067804; iTF_00067805; iTF_00067806; iTF_00067807; iTF_00067808;
80% Identity: -