Caur028440.2
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- -
- Assembly
- GCA_949128085.1
- Location
- OX421886.1:7324245-7325805[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-08 9.7e-06 26.8 0.1 3 40 17 54 15 57 0.89
Sequence Information
- Coding Sequence
- ATGGtaaaaacatataaaagaaaaactgaaaggGGATATATTTCAAAGGACATTTTTGAGCAAGCTCAAAATGCTGTATCACAGGAGAAGATTTCTATAAGAACTGCGGCAAATCGGTACGGAATAAATTTCATGACTCTTTTCCGTTACATAAAGAAACGAGGTGCCGGTGAAGATGCAGCTAATGTATCAGTTGGGTATGCAAAACCGTCTCAAGTGTTCACTGACGAACAGGAAGAGGAACTGTCGAAATATGCTGAGGATtgttcaaaattatattatggATTAACCTTGTGCGTACGCCAGAATCCACAAGTTTTTGATAATCTTGATACTGTCtacgaaaaatataaatttcaagttAGTGACATTTACAACGTGGACAAAACAGGATTGACTACCGTTCAGCGTCCATCTAAAATTATTGCTAAACGAGGAATTAAGCAAGTCGGAGCAATAACGTCGGGAGAACGAGGAGTATTGGTTACTATGGCATTAGCAGTAAGTGCAGGTGGCAATGCTATGCCACCTATGTTAATATTTCCgcgtaaaaattttaaatcgcATATGATTACTAATGCGCCCTGTGGAACTATAGGAGCAGCACACCCATCTGGATGGATGACAGctgaaaattttttgttgtttgttgagCACTTTGCCAGATTTACCCGCTGCACCAAAGAAAAACCCGTTCTCTTGATTTTAGATAATCATCAGTCCCACTTGTCAATTCCTGTACTAAATTTCTGTAAAGATAACGGTATTGTTCTTTTAAGCTATCCGCCTCATACTTCTCATCGGCTTCAACCACTCGACAGAACAGTATTTGGACCGCTTAAGAGATATTTCAATATGCACGCGGATGGATGGCTTAAATCACATCCTGGTGTAGCAATGACTATTTATGACATTCCCTCAATATTGAAGGAATCACTGCCGGCTGCTACCACGCCTAGTAATATACAGAAAGGATTTTCTATTACCGGAATTTGGCCTTACAATCGTAACATATTTGCAGACGACGATTTTCTACCTTCAGAAGTAACCAATAGAGATTACTATATTGCTAACGAGCAGCCGCCTGACTTATCGATACCACGCCAAAGAACACCGTCACCCCAGCCCTCAACGTCAACAGGGAATTGCAAAGGGAAAGCAGATGCTATTACACCGCAATACTTGAAACCATTTCCAAAAGCCGGTCCCCGGAAGGCAGGAAACACCCGTCGAAAACGTAAATCGGCAATACTAACTGATACACCTATAAAAGCTTCTTTGGAAGAGGAAGTTCAAGAGAggaaaaatagaaagaaatgcAAAGGTAAAGCGACAAGGAAGATAAGTGGAAGTAAACTGCAAAGGTGCGTTAAGAAGAAAAGCAATGATCGTAAGATGCAatcagaagaagaagaagaagaggagtAG
- Protein Sequence
- MVKTYKRKTERGYISKDIFEQAQNAVSQEKISIRTAANRYGINFMTLFRYIKKRGAGEDAANVSVGYAKPSQVFTDEQEEELSKYAEDCSKLYYGLTLCVRQNPQVFDNLDTVYEKYKFQVSDIYNVDKTGLTTVQRPSKIIAKRGIKQVGAITSGERGVLVTMALAVSAGGNAMPPMLIFPRKNFKSHMITNAPCGTIGAAHPSGWMTAENFLLFVEHFARFTRCTKEKPVLLILDNHQSHLSIPVLNFCKDNGIVLLSYPPHTSHRLQPLDRTVFGPLKRYFNMHADGWLKSHPGVAMTIYDIPSILKESLPAATTPSNIQKGFSITGIWPYNRNIFADDDFLPSEVTNRDYYIANEQPPDLSIPRQRTPSPQPSTSTGNCKGKADAITPQYLKPFPKAGPRKAGNTRRKRKSAILTDTPIKASLEEEVQERKNRKKCKGKATRKISGSKLQRCVKKKSNDRKMQSEEEEEEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -