Basic Information

Insect: Cetonia aurata
Gene Symbol: PAX6
Assembly: GCA_949128085.1
Location: OX421885.1:8551891-8563716[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-09 2.7e-07 31.8 0.1 2 44 150 191 149 192 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-09	2.7e-07	31.8	0.1	2	44	150	191	149	192	0.92

Sequence Information

Coding Sequence: ATGCACCACGCAGCGATGGGCCAAAATACAATATTCGGATGTTCTGCTGCGGGTCACAGCGGTATAAATCAACTTGGGGGCGTCTATGTGAACGGCAGACCTTTGCCGGACTCCACCAGACAAAAAATTGTAGAACTGGCGCACTCGGGTGCGAGACCCTGCGACATATCGAGGATATTGCAGGTGTCGAACGGATGCGTTTCGAAGATATTGGGGAGGTATTACGAGACGGGTTCCATCAAACCAAGGGCAATCGGCGGATCGAAACCAAGGGTGGCCACACAACCGGTCGTCCAAAAAATCGCCGAGTTTAAGAGGGAATGCCCCTCGATCTTTGCGTGGGAAATAAGGGATCGACTACTTTCGGAGGGTGTCTGCAATAACGATAATATACCTAgcatCGATATGCCACgaaaatatgttaagaaaaCCAATCCGAAATATGCTAGAGACGTTTTAATTGCTGCTATGGAAGCAGTAAGCACCGGAACAAGTATTTATGCTGCTTCAAGACAATTTGGTGTACCAGAGTCCACTATTCGAAACAGAATAAAACGAAAGACTCCTGTAACTCGTGTTGGAGCTGGTAGAAGTAGTTTTCTTCCCAGTGATATAGAAAAAGATTTGGCAGATAACGTAATATTGCTGTCTTCCGTTCATAATCCACTTACACgtggagaaattttaaatactgtcCATGAGTACTGCAAGCTAAAGAAAATCACAAATCCATTTTCAAAAAAGGCTGACGCCTTACCCGGTGAAGAATTCCTAAGAGGATTTTTTAAGAGACATCCCAATCTTGTCAGTCGAAAAGCAGAAGCGTTACAAGCAGCTCGAGTCAATTGCTCTACGAAAGAGAACTATTCCATATTCTTTGGACTACTAGAAAGAAAGATTAAAGAGCTTAACATTAGTTCTCCAGAACAAATAATTAACTTAGATGAAACTGGCTATGATACATCACTTGCTACAACAGTAATAGCCAGAAAGGGAACGAAATGTGTATCTCAAAAGCAGCCAGGCAGTGGAAAAGACACATTTACAGTTGTCGAAACAGTAACAGCAAATGGTCTCATTTTTCCACCAGTAATaatttacaacaagaaaaatttGTACAATTCGTGGTGCCTGGGAGGCCCTGAAGGCACTGGGTATTTGGTGTCCAAAAATGGATGGCAAGATAAATcaacgtttttaaaatattttgaagaatttattaaatggaCAACCGATTGGAAGAAAcctattttgcttttgtttgatGGTCATGGAAGCCATATACAATATGCTGTAAGCAGTTTGGCTTTGCAGAACGACATTCATATATTAACTTTACCAGCGCATTCATCCCAAACCCTTCAACCTCTTGATGTTGCCGTTTTTGGACCAGCAAAAAAAGTGTGGATGAAGATCAAAaggaattattttaagaaatctaACACTAATATCACAAAGGAGGTATTTCCATCCTTAATGAAAGAATTAAGAGATGAAGGTGGCTTTCCTAAGGAAAATATCATTGCTGGTTTCAGAGCCGCTGGGATATGGCCACTAAATCCAAGAAAAGTTTTAGACTCTATGCAAGAGCAAGATGTACTAATAGATTTACACGTAACAGCAGACGAGCCCAGTAATCAaccaattaataacaatatgatAGACAATGAGCCCCGAAATAAGCCGACTACTGATCAAACAGACAACGAACTCCAAAATAAGCCAACTACTTCTCGAATAGACACTGAACTCCAAATTAGGCCGACTACCTCTACAACATTAAACGTAGAACATAACGAAAATAGCTCTTTAGACACATCAACGCTAACGACTGCAACAACACAAGGTAAGCTCGGTGAACACTGCATTTCGACATTTAGAGATGTTCTATTAAAAACTGTTACGCCAAAATCTCGTTCTATGAATAACAAAAAAGTTAGAatgacttttaataataaagttttaacagAAGCTGATGTGTTAGATCagatgaaagaaaaagaaaatgaaattttggcaaaaaaaaataaaagaataaagaaaCCTCAGAATAGTACTAATGATTTAAGTGTAACCAATAAACGAgccaaaaaaacaatgaaaaaggtTGAATCCTCAAGTGAAAGTGAAGAAATTTCGTTACACGATTCCTCTGATGACATAAGTCTCTTCTCTGACGAAGATCAAGAAGAAACTCGAGAAGAAAATACAAACTTGGGTGATTTGGAGCTGGGAGGGTATGTTGTGGCAGAGTATGAAAATCGGTGGTACGTTGCAAATATTttggatattaaaaataagaacaagattttaaaattaaaatacatggaGCCCAAGGGTCCTAATAATTTTGTGTGGCCCAGTAAAAATGACATATTTGACACCCCAATATCAGATATTTTAACGACGGTCAGAACCCCTGTCTCTGTTAGTAAAAGGTTCCTGGGTTTAACCACTGAGGACTACCAGAAAGTGCAAAAACTATGGGCTTTACGGCGTAAATAG
Protein Sequence: MHHAAMGQNTIFGCSAAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIKPRAIGGSKPRVATQPVVQKIAEFKRECPSIFAWEIRDRLLSEGVCNNDNIPSIDMPRKYVKKTNPKYARDVLIAAMEAVSTGTSIYAASRQFGVPESTIRNRIKRKTPVTRVGAGRSSFLPSDIEKDLADNVILLSSVHNPLTRGEILNTVHEYCKLKKITNPFSKKADALPGEEFLRGFFKRHPNLVSRKAEALQAARVNCSTKENYSIFFGLLERKIKELNISSPEQIINLDETGYDTSLATTVIARKGTKCVSQKQPGSGKDTFTVVETVTANGLIFPPVIIYNKKNLYNSWCLGGPEGTGYLVSKNGWQDKSTFLKYFEEFIKWTTDWKKPILLLFDGHGSHIQYAVSSLALQNDIHILTLPAHSSQTLQPLDVAVFGPAKKVWMKIKRNYFKKSNTNITKEVFPSLMKELRDEGGFPKENIIAGFRAAGIWPLNPRKVLDSMQEQDVLIDLHVTADEPSNQPINNNMIDNEPRNKPTTDQTDNELQNKPTTSRIDTELQIRPTTSTTLNVEHNENSSLDTSTLTTATTQGKLGEHCISTFRDVLLKTVTPKSRSMNNKKVRMTFNNKVLTEADVLDQMKEKENEILAKKNKRIKKPQNSTNDLSVTNKRAKKTMKKVESSSESEEISLHDSSDDISLFSDEDQEETREENTNLGDLELGGYVVAEYENRWYVANILDIKNKNKILKLKYMEPKGPNNFVWPSKNDIFDTPISDILTTVRTPVSVSKRFLGLTTEDYQKVQKLWALRRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00307620; iTF_00307621; iTF_00307622; iTF_01252696; iTF_00307838; iTF_01252675;
90% Identity: iTF_01252675;
80% Identity: iTF_00307622; iTF_00307838;