Caur002668.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- -
- Assembly
- GCA_949128085.1
- Location
- OX421882.1:14029867-14031878[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-11 8.9e-09 36.5 0.0 1 39 17 56 17 60 0.93
Sequence Information
- Coding Sequence
- ATGCCAAGAAAAGAGAAATACAAGAGGACCACTAATCGGCAGAGCTGGTCAGAGGAAAGCATGGCTTTAGCCATCGAAGCAATGTTGAACGGCACGATGGGATCAAAAAAGGCGTCATGCAGCTACAATGTTCCTCAAACCACATTAGAAGACAGAGTCAAGAAGGCCCGTCAGAGTAATCTACCCCCACAAGTTGCTGCAAAGAAAGGTATGGGTAGATTTAAACCAGTTTTTACTGATGCTCAAGAAAAAGAGATAGTTAACCACGTTGTTGCTCTCGAAGAAAGACTCTTTGGTGTAACAATGACTGAGCTTCGAGAGATTGCCTTCCAACTCGCagagaaaaataacatttctcataattttaataaacttgaaAAGATGGCTGGGAAAGAATGGTTGTACAGTTTCTTGGAGAGACATCCACAACTTCGGCTGCGAAACCCTGAGAAGACATCATTAGCAAGAGCAAAGGGCTTCAACCGCACTGCGGTGGGCAAGTTTTTTAATCTTCTACAGTCCCTTTACGATAAATATAACTTTTCTCCGTGTGATATGTATAACGTAGATGAAACGGGGATTTTGACAGTGCCAAACAAGCCATCTAAAATATTGGCTCAAAAAGGAAGAAAGCAGGTCGGCAATTTCATGCCACCCATGTTCGTTTTCCCCAGAGCTAAAGCGAACCCCCTTCTAATGGATGATGCTCCCCCCGGATCATTCGCTACATACAATAAGAGCGGGTGGATTAGTACCGAAACATTTCTCGTTTGGTTCAAAAGATTTGTAGAGTTTGCTCATCCCTCAAAAGAGAAACCAGTTTTGCTGCTACTAGACGGGCACAAGTCTCACACAAAAAGCATTCCGTTGATCAATGCTGCTCGAGAAAACAATGTCATTATCTTATGCTTTCCGCCTCATACATCTCACCGCTTGCAGCCACTTGATGTATCGTTTATGTTTCCTCTCAGTGCATATTATGAACAGGAAGTAAGGAAATGGCTTATCAATAATCCTGGACGTGCAGTTACAATCTACCAAATTGGAAAGTTGTTCCGTTCTGCATACCTGAGGGGAGCGGTGGCACAGACTGCTATAAAAGGGTTTGAAAAAACAGGGATTTACCCTTTTAATAGTGACGTATTCCCTGATCACCTATTTGCTCCTTCTGAGGCAACGGAGAGACCCATGGCTGTGGAGGTTGCAGAGAACCCTATGGAGGAACAACGAGACGAAGAACTGCCCGATGAGGAGAGAGGAAATTTGTCCGATAAAGAGACAGAATATCTGTccgataaagaaaataaaactctacCCCAAAATCAATCAACGCTGACTTCATATGCTCCGCTACTCGTGCAAGTTGATGTCCATGAACAACCTAAAACAGTTGACTATCAACAACCTTCTACTTCTCAGTGTCATGGTCAAACGTTCATGAGTCCATTTTCAGTCTCGCCAAAGGATGTTAAGCCTCTTCCAGTACAATCTGGTCCTAGGGCCACTAACAAATATGATAAAAGGCGTGGAAAGACAGCAATAATTACTTCGTCACCATACAAGTTAGAGCTTGAGCAAGAAGAAAATGATAGGatggaaaaacaacaaaagaaaggTGGAGCATTGAAGCGAAAGCTTTACAAGGTGACAGGAAAAGATAAGCCCGCCAAAGATAAAAAGAAGTCAAAGGTGACTAAAAAAGAATCGAAGGTGATTGAAAAAGgacagaaaattattaaaaagaagcaAATAAATAGGGAACCTATGACATCAGATGAAGAGGACAGTGAAGGAAACGACGAAGCATGCTTATTTTGTAATGGACTGTATGCCGAATCGAAGTCCAACGAAGGTTGGATACAATGCCTCCAGTGCAAACGTTGGGCTCATGAGGCCTGCAGCAACGCTGATGAGGAGGACCAAAGTTTCATCTGCGATTTTTGTGAATAA
- Protein Sequence
- MPRKEKYKRTTNRQSWSEESMALAIEAMLNGTMGSKKASCSYNVPQTTLEDRVKKARQSNLPPQVAAKKGMGRFKPVFTDAQEKEIVNHVVALEERLFGVTMTELREIAFQLAEKNNISHNFNKLEKMAGKEWLYSFLERHPQLRLRNPEKTSLARAKGFNRTAVGKFFNLLQSLYDKYNFSPCDMYNVDETGILTVPNKPSKILAQKGRKQVGNFMPPMFVFPRAKANPLLMDDAPPGSFATYNKSGWISTETFLVWFKRFVEFAHPSKEKPVLLLLDGHKSHTKSIPLINAARENNVIILCFPPHTSHRLQPLDVSFMFPLSAYYEQEVRKWLINNPGRAVTIYQIGKLFRSAYLRGAVAQTAIKGFEKTGIYPFNSDVFPDHLFAPSEATERPMAVEVAENPMEEQRDEELPDEERGNLSDKETEYLSDKENKTLPQNQSTLTSYAPLLVQVDVHEQPKTVDYQQPSTSQCHGQTFMSPFSVSPKDVKPLPVQSGPRATNKYDKRRGKTAIITSSPYKLELEQEENDRMEKQQKKGGALKRKLYKVTGKDKPAKDKKKSKVTKKESKVIEKGQKIIKKKQINREPMTSDEEDSEGNDEACLFCNGLYAESKSNEGWIQCLQCKRWAHEACSNADEEDQSFICDFCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00307534; iTF_00307535; iTF_00307536; iTF_00307537; iTF_00307538; iTF_00307539; iTF_00307540; iTF_00307541; iTF_00307542; iTF_00307543; iTF_00307544; iTF_00307545;
- 90% Identity
- iTF_00307534; iTF_00307535; iTF_00307536; iTF_00307537; iTF_00307538; iTF_00307539; iTF_00307540; iTF_00307541; iTF_00307542; iTF_00307543; iTF_00307544; iTF_00307545;
- 80% Identity
- -