Caur003228.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- -
- Assembly
- GCA_949128085.1
- Location
- OX421882.1:20008445-20009795[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-11 4.1e-09 37.6 0.1 1 37 35 71 35 75 0.94
Sequence Information
- Coding Sequence
- ATGTCATTGATAAACGGTCCGTACAAACTGGAGAAAAAAAGACAACAGGAATATGAGAGCGAGTTCTTTCAGAAATACCTTTTTCAACATCGAGGCAACTGGAGCGAAGAAACTTTAGGAGAGGCAATAGAAATGATATCTACTGGTCGAATGGGCACCAACGAGGCTAGCAGAGTCTATGGAATAGCTTCGCGTACCATCAGAAGGCATTTAACAAAAGCAGAGTTGGGGTTTCAGCATGAACAAAGACTTGTCAAGCACGTAAAAGAACTGGAAAAAGTGGGTTTTGCCCCCGATGCTGCTAGCATGAAAAAAATGGCTTTTGAATTTGCCGAGAAACTCGGAATTACCCACAGATTTTCAAGAGAAAATCGATCAAGAAAGAAAGATCAAAGCAAAAtggaaagaagaagaaaggaaATTACAGCTCCTCTAGTTCCGAAAGTGAACCAGAAATGA
- Protein Sequence
- MSLINGPYKLEKKRQQEYESEFFQKYLFQHRGNWSEETLGEAIEMISTGRMGTNEASRVYGIASRTIRRHLTKAELGFQHEQRLVKHVKELEKVGFAPDAASMKKMAFEFAEKLGITHRFSRENRSRKKDQSKMERRRKEITAPLVPKVNQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00307521; iTF_00307528; iTF_00307664; iTF_00307603; iTF_00307608; iTF_00307520;
- 90% Identity
- iTF_00307521;
- 80% Identity
- -