Caur017657.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- -
- Assembly
- GCA_949128085.1
- Location
- OX421884.1:20213336-20216399[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-13 1.2e-10 42.5 0.0 1 39 17 55 17 60 0.93 2 2 7.7 1.1e+03 1.0 0.0 12 26 63 76 61 77 0.91
Sequence Information
- Coding Sequence
- ATGCCTAcgcaatacaaaagaaaaggaaCCAAATTTCAATGTTTGTGGAGTGAGGAGCAGCTAGCAGAAGCTGCAAATGCGGTTCGAACGGGAGAAATGGGAGTAAATGAAGCCTCTAGACCTTTTAATATACCTCCCCCAACACTAAGAAGGcgattaaaaaAATCTTGGGCAAAGTCTGCGCCTGTTAGCAATGGTATATCTGCATTTAGAGCTGCCGGTATTTACCCCTTCAATCCGAATGCTATTCCCGACTATGCTAGACAACCTCCACCTGAACAATCTCTCGTTGACACCAGAGCAAATAATATGCCATCCACCTCTCGTACTGCAACAAATCATACAGGGTCTAGTATCTCTCTCAAGAGCAGCTTCGGGATTCTGATTCTACTCGAACAAAGGATCCAAAATCGACCGCCTCCTGGCATCCACCCAAGACTCCACCACCAAACAAGCGAACTCCGAGAATCAAGTGAGGACATAGAGGAGGAAGATGAAAATGGTTGCGGTGAAACATACAAAGCTACCTCAAAGAAGGACGATTGGCTTCAATGTGTGCATTGTGCTCGTTGGTTTCACGAGAGTTGCTCAAAATATGAAAACTTATGTGACCGCTGTGGGCTAAGTGAAATCATTCGTGAACTTTTTAAAACCGGTTTAAATGCATTGAAATGGGCGAGAATTCTCCAAATATTTGGTTTTCATTTCGAAAACAAAGTTAGAGGCGAGGAGTTGAATTTGAAAACCGCTACCCCGTATGAGAGATATTATTTCGCTTGTCAGGGGCTTTTTGTTTTCACCGCGTCCTTCTAA
- Protein Sequence
- MPTQYKRKGTKFQCLWSEEQLAEAANAVRTGEMGVNEASRPFNIPPPTLRRRLKKSWAKSAPVSNGISAFRAAGIYPFNPNAIPDYARQPPPEQSLVDTRANNMPSTSRTATNHTGSSISLKSSFGILILLEQRIQNRPPPGIHPRLHHQTSELRESSEDIEEEDENGCGETYKATSKKDDWLQCVHCARWFHESCSKYENLCDRCGLSEIIRELFKTGLNALKWARILQIFGFHFENKVRGEELNLKTATPYERYYFACQGLFVFTASF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -