Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_949128085.1
Location
OX421891.1:13653829-13660849[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-27 5.7e-23 82.7 0.0 2 89 105 188 104 188 0.95

Sequence Information

Coding Sequence
ATGGCTTCTAAAGAAGATAAGAGACCAAGCAATGGTAGTTTCAATGGTGGTGAGTACGTGAACACCAGCCTCAAACATGAACCGTTCGAGTTTGTCATACCTCCGGAGGCTCCAGTGTTCTGCCCCACTGACGAAGAATTCGCAGATCCTCTGGGATATATCGATAAGATAAGGAGTATAGCTGAACAATGTGGAATTTGCAAAATTAAGCCACCACCTAATTGGCAGCCCCCATTCGCAGTCGATgttgataaattaaaattcacCCCCAGAATACAAAGGTTAAACGAGTTAGAAGCAAAAActagaataaaattaaactttctgGACCAAATTGCGAAATTTTGGGAGCTGCAAGGATCCTCCTTGAAGATCCCAATGGTTGAGAAAAGGGCTTTAGATCTCTATACATTGCATCGTCTCGTACATAGCGAAGGTGGGTTCAGTAACGTAACGAAAGATAGGAAATGGTCCAAAATAGCAACGTGCATGGGCTACCCACAGGGAAAAAGCATAGGTACCATGTTGAAGACGCATTATGAACGACTGCTGTATCCCTATGAGGTATTTTCCGAGGGCAAATCTTTAAAGAACTTGAAAAAGGAACTGAATAACGAAATCAAGGGCGAAAATGATGACGAGGAATACAAACCGCACCGTATAGAAAGCAGAATGTTAGTGAACAAGAAAGGAGGTTGTAGGCGCAGAAAAATTGGCGATACCGAATCCAGACTTCGCAATGAGCATAAACTCAAAGAGGATGGGGACGCACTCGACGGCGAACACAACAAAGAATTGAAACGTTTGCAATTCTACGGCGCGGGACCTAAGATGGCGGGTTATAATGATAAGAGAGACGACAAACCCAGGGGGAAGTTGGTGAATTATGATCTCGATTATGACCCGTTGGCCAAGTACGTCTGCCATAATTGCAATCGCGGTGATTCCGAGGAGTATATGCTCTTGTGCGATGGATGCGACGATAGTTATCACACGTTTTGCCTTATGCCACCTTTGGTCGAGATCCCGAAAGGCGATTGGTGTTGCCCTAAATGCGTAGCGGAGGAAGTGTCGAAGCCGACAGAGGCTTTCGGTTTCGAGCAAGCGCAGCGCGAATATAACCTACAACAATTCGGGGAAATGGCCGATCAGTTTAAATCCGAATACTTCAACATGCCTGTACATCTCGTACCGACTAGCGTGGTCGAAAAGGAATTTTGGAGGATAGTTTCGTCCATCGACGAGGACGTGACGGTGGAGTATGGGGCGGATTTGCACACTATGGATCACGGTTCTGGGTTTCCGACTAAGAATTCCCTAAATCTACTTCCGGGCGATCAGGAGTACGCCTATTCTGGGTGGAACTTGAATAATTTACCCGTCCTAGAAGGATCCGTGTTGGGGTATATCAACGCCGACATATCAGGAATGAAGGTACCGTGGATGTACGTCGGTATGTGTTTCGCTACGTTCTGCTGGCACAACGAAGATCACTGGAGCTATTCGATCAATTACTTACATTGGGGCGAGCCGAAAACCTGGTACGGCGTTCCCGGTGCGAAAGCCGAGATGTTCGAAGAGACGATGAAGTCGGCCGCACCCGAACTTTTCCAATCGCAACCCGACCTCCTCCACCAATTGGTGACTATCATGAATCCCAATATATTGATGAAAGCCGGCGTTCCCGTTTACCGGACCGATCAACACGCCGGCGAATTCGTGGTTACATTCCCCAGGGCGTACCATGCGGGCTTCAATCAGGGTTACAACTTCGCGGAAGCGGTCAATTTCGCGCCGGCCGATTGGGTTTCGATGGGACGCGAATGCGTCTTGCACTATTCCCAATTGAGGAGGTTCTGCGTGTTCTCCCACGACGAGTTGGTGTGCAAGATGGCGGCGAATCCGGAAAAGCTAGACATCACAGTCGCGGCTGCCACCTACCAAGACATGTTGAGGATGGTCGAGACCGAGAAGAAACTGCGTAAAAGCCTCCTGGATTGGGGTGTGACCAATGCCGAAAGGGAAGCGTTCGAGTTGCTTCCAGACGACGAGCGTCAGTGTGATATTTGTAAGACGACGTGTTTCATGTCGGCGATATCCTGTTCTTGCATGAACAACGTCTTGGTGTGTCTAAGGCACTATACGGAACTTTGCAAGTGCCCTCCGCCAAAGAAAACCCTGCGTTATCGATATACGTTGGACGAGTTGCTTCCATTGTTGCGAAATTTGAAGACCAAAGCCGAATCGTTCGATCGTTGGGCCGATAGAGTTAAGGACGCGTTAGACAGGAATACCCCGAAGAGCGTAGATTTGTCGGAATTGAAGGCGCTCCTATGCGAGGCTCACGGCAAGAGCTTCCCGAAATCGGATCTAATCCAAACGTTGGCCAACGCCATCGAGGACGCGGAGAAGTGCGCCAGCGTCATCAGGCAATTGGATCTGAACAAAATCCGCACCAGGAACTCGCAGGACAACAAGAGCAAGCTGACGTTCGAGGAGTTGACCTTGTTCTGCGAGGAGATCGACAGTCTGGCCTGCGTCCTAGACGAAGAGAAGATAATAAAGGAATTGAAGGATAAATCGCAAGACTTCGAGAGGGATAGTCGACGTCTCCTAGAGCTTCCATTAAAGAACTGCCCGATATCGGAGGTCGAGGAGCGCGTTAGATCCAGTAACGATCTGTGTATCGAGCTTCCGTCTTTACCGCCCCTATTGACGCGACTGAAACAATTGAGGTGGTTACGTGATACGCAAAATACGCGAAACTCGACGGACGTGGCCGACATAGAGACCCTGAATACCTTGCTTAAATCCGGCGCGGAATTGCCCGCCGATCCGGTAATCGACATTGTCATGTGCGACGTACGTTCCCTCATAGCCGAGGCGGAGCGATGGGAGGAGAAGGCGCAGGAATTGCTCAAGAGGAACGGCTCGAGTATCATATCCCAAGCCGAACAGTTAATAAAGAACGCGGCGGACATAGATGTGTACTTACCGACCGAAAACCTATTGATCGACAGTCTGAACAACGCGAACGAGTGGTTCAAGCAACTCCAAGACATGAACTCGTTGGAATTTTATCCGTATTTGAGCTCGATCGAGGAGCTCATAAAGAAAAGTAAAAGTTTCTCCTTCCAACTGGACGAAGTGGATAAGTTGAAGTCATACGTCACCGCGGCGAATACTTGGAAAGAGAAGACAGGTAGGATATTCCTACGTAAGAACTCGCCTAGTACCTTAATGGAGGCGCTGTCTCCGCGCACGCAGTTCGTCATAAATAAGAGCAGGCGGAAAGTCCAAGACGAGGAGAACTGTATAAGGCTTTTGGACAATATGGACCCCGCCGCTGTAGTCGCTACCTTCAAGGACGCCGAAGATAAAGAGATGAGAGCGATAAGGAATCTGAGGGTGATTAACATGAGTAAATCGTTCGACGACTCGGTATTCTGCGTGTGCCAGAAGGTAGCATCGGGAACTATGATGCAATGTGATTTGTGCAAAGACTGGTTTCATTCATCCTGCGTCCAACTGCCGAAAATCGCGACGCTAAGATCGAGAAACAATTGTTCTGGCGCAGCTTTACGTTTGGGCTACaaagattgtaaatatttatgccCGTTGTGTTTTAGGACGAGAAGGCCTAAACTCGAATCGATACTAGGTCTTCTGATGTCCCTACAAAAACTGCACACGCGTTTACCCGAAGGCGAGGCACTGCAGTGCCTAACCGAGAGAGCCATGAATTGGCAAGATCGTGCCAGGCAGTTGCTCCAAGCTGCCGAACTGGAGATACCGTTAAGTAAGATAAACGTATTGACGCAGAGGTGCAAAGaggcggcggcggcggcggcggcggcggcgaATCTGAAAATCGAAAAGAACATCGGTATGGAGTTGAAAAGGGCGGGAAACGATGGTGAATTACGCGACATGGCCTTGGGCAGGATTAACGGCGAAGATCAAGAGGAGAACATGAGCATTTCGTCGGAAGACGAGGTGATTAGGGGGGACGAGAATGTGGAGGAAAATTGCAGAGATGAGCACGCTTATTCCATGCAAATCTCCAAGCCGGAAGATCCCGAATATGCGATCCATATCCCTGCGCACGTCAGGCAACAATTAGAAGATTTGGTGATGGAAGGCGATCTCCTAGAGGTCACGTTGGACGAGAACCAGCAGCTATGGCAGATTTTGCAGGCGACCAGGGAGCGCGAGAGAGACATTTGCGTTTTCGATATGGAAaCTTCCGGGAAGGGGTCCTCGTTGAAAAAGAATCGGAAACGTCGTTCTGACGATGGTGCCGaattaataaaagcaaacactaaacaaAAGACCGATATCGGTAAGAAATTCAAGGCGAGGCGACCGAATGCCAAAGAGACGTACCCGAAGCGGCAGGAGGGAGTTAAATCGAGAAAGAGGGGGCGGAACAGTCAGAATTCCGACGAAGACGAACCAGAAGAGCGTTGCGCTTTCGAAACGTGCCTTCAGCCTTCCGGCGAGGAAGTGGTGCAATGGGTACAGTGCGACGGTGGATGCGAACTGTGGTTTCACATGTTATGCGTCGGTTTGACCGCCAAAGATATAAACGAGGACGAGGATTATATTTGCATGGCTTGCTCCCAAGAGACTGTAAAGAACGATTTGGAATGTACCAAGGAACAATCGCCTTCTCCGGTTTGCGGTATTAATTCGAGTAGTGTTGCGAAAATAACAACTTTAACCAAGGCTAGTTAA
Protein Sequence
MASKEDKRPSNGSFNGGEYVNTSLKHEPFEFVIPPEAPVFCPTDEEFADPLGYIDKIRSIAEQCGICKIKPPPNWQPPFAVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVHSEGGFSNVTKDRKWSKIATCMGYPQGKSIGTMLKTHYERLLYPYEVFSEGKSLKNLKKELNNEIKGENDDEEYKPHRIESRMLVNKKGGCRRRKIGDTESRLRNEHKLKEDGDALDGEHNKELKRLQFYGAGPKMAGYNDKRDDKPRGKLVNYDLDYDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLVEIPKGDWCCPKCVAEEVSKPTEAFGFEQAQREYNLQQFGEMADQFKSEYFNMPVHLVPTSVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSLNLLPGDQEYAYSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAKAEMFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWVSMGRECVLHYSQLRRFCVFSHDELVCKMAANPEKLDITVAAATYQDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCDICKTTCFMSAISCSCMNNVLVCLRHYTELCKCPPPKKTLRYRYTLDELLPLLRNLKTKAESFDRWADRVKDALDRNTPKSVDLSELKALLCEAHGKSFPKSDLIQTLANAIEDAEKCASVIRQLDLNKIRTRNSQDNKSKLTFEELTLFCEEIDSLACVLDEEKIIKELKDKSQDFERDSRRLLELPLKNCPISEVEERVRSSNDLCIELPSLPPLLTRLKQLRWLRDTQNTRNSTDVADIETLNTLLKSGAELPADPVIDIVMCDVRSLIAEAERWEEKAQELLKRNGSSIISQAEQLIKNAADIDVYLPTENLLIDSLNNANEWFKQLQDMNSLEFYPYLSSIEELIKKSKSFSFQLDEVDKLKSYVTAANTWKEKTGRIFLRKNSPSTLMEALSPRTQFVINKSRRKVQDEENCIRLLDNMDPAAVVATFKDAEDKEMRAIRNLRVINMSKSFDDSVFCVCQKVASGTMMQCDLCKDWFHSSCVQLPKIATLRSRNNCSGAALRLGYKDCKYLCPLCFRTRRPKLESILGLLMSLQKLHTRLPEGEALQCLTERAMNWQDRARQLLQAAELEIPLSKINVLTQRCKEAAAAAAAAANLKIEKNIGMELKRAGNDGELRDMALGRINGEDQEENMSISSEDEVIRGDENVEENCRDEHAYSMQISKPEDPEYAIHIPAHVRQQLEDLVMEGDLLEVTLDENQQLWQILQATRERERDICVFDMETSGKGSSLKKNRKRRSDDGAELIKANTKQKTDIGKKFKARRPNAKETYPKRQEGVKSRKRGRNSQNSDEDEPEERCAFETCLQPSGEEVVQWVQCDGGCELWFHMLCVGLTAKDINEDEDYICMACSQETVKNDLECTKEQSPSPVCGINSSSVAKITTLTKAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01252517;
90% Identity
iTF_01123470;
80% Identity
-