Basic Information

Gene Symbol
NFX1
Assembly
GCA_963169105.1
Location
OY720639.1:35367535-35381049[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.3 1e+05 -3.5 1.6 15 19 520 524 519 524 0.81
2 6 0.12 8.8e+03 -0.2 2.8 4 13 553 562 552 563 0.86
3 6 3.1e-07 0.023 17.7 14.5 3 19 570 586 569 586 0.92
4 6 4.2e-09 0.00032 23.6 11.8 1 18 622 639 622 640 0.97
5 6 0.23 1.7e+04 -1.1 0.6 6 10 672 676 671 678 0.91
6 6 2 1.5e+05 -9.6 20.4 3 19 679 700 676 700 0.72

Sequence Information

Coding Sequence
ATGGAGAATTGGAACAACACGTATTACAATGCTGGGGATCCAATGGAATTTTTAGGAATGTATGGAAATCAGCAGCAGGAAGCTATGCACTGTGGTCCATTGACTGATTACAGTCAGAATTCTTTTTTTAGTACCTTACCTATGGCACCTGCCATTCAGCCTACCCCCTTAGAATACGTCGAAAGAAATTTAATGTCTCAAAACCTTCCTCCCCCCACAATTACTCATGATGACTCCAATGCCCTGTACATCCCTCACAGTGGTGGAATTTATAGCAATATGATGGATCATTTCAGTGCCATACCTTTGGGTTCGTTGCCTTTTCCTAGTGAACCTCCTCCAAGTGAATTGGCAGAACCTCCTGATTTAACGCCGTATGATCATTCGATATCTGGTTCGAAGAGGGGTGGTCGTGCAATGAACTCCACGAGAATACGCTCCAGTAATCGCTCTGGATCTGGGCGAATCTTTAGTGGTCGAGGAAACCATCAAGTGCGATCAACCCAAGTCACCGTTGCGGACCCTGAAGACGCCTCGAGAAGAAATGGCCCTGAAAGCATGGGAGCCTCTAATAGACAGACTTTTTCGTACGATAACATTAGAGGTTTTCGAGGGTCTGGGCGAAAGAGGAGCGGTGGAAATTCGTGGAGTCGCGGCCCTCGTGGAGGATCATCCCGCGGTATGCCTTCGTCTCGCATTGACACGCCACCATTCGCAAATGCATTTGATTACTCGATTGGCCGCGAAGAAAGATACCGGGAACGTCGGCAAATGCCGAATGAAGCCGCTGCTGTTTCAGTCTCTCTTCAGTCGGAAAACTGGAACAAACGTCGGCAAAGTAACACCCCGAAGGATAACTTCAGAAACCCCAATGAAAACACGAGACACCGTCAGGAGAATCGAAGGAATCGGTATGAAAATGGAAGTAAACCATTGGTCAATGGTGGTGAGAATGTGGAAAATGAATATAACCCGGTGGATAGTGAGAAGAATCAAAGTGAAGACTCATTGGACAACTCTGACGGGGGGAGGCTGCGGACAGATGGCCGTAAGAACTTTGGTGAGAGTATGAGGAGCTCAAATGATCACGGAAGAAGTTATCGGGATGGGCGCAGGAATCACCCCGATAGCTCGAGGAATAAACCCGAGTCTTGGAGAGGAGGACCAAGCCGTGATTGGAGGTCGGGAGGCGATGGCTCCCGAAATTATGATAGTGGTAGGCAAGGAAATACTACTAGTGACCGAAAGAATCAAGCTGAATTTTGGAGGTTTCGCAAGGAGCGCGAGGATGATTCGAAAGAGCGGAGGAAGAATCTTGAAACCGATTCATTCGGCAAGGTCGTCGAGGAAACAAGCTATAAGGTTAAGGAAACCGAAGCGAGTAGACGTGAAAAGCTTGAGGAAAGCTTGCGCAGGGGGAACTATGAGTGCATGGTTTGCTGTGAGGCTGTGAGACAAAGAGATTCCATATGGAGCTGCGGGAActgttttcatgtatttcatctcCGATGCATTAAGCAGTGGGCCCGAACTTCCCGTGATGATGGTGGTTGGCGATGTCCAGCTTGTCAGACTGTCAGAGAATCAATGCCATATGACTACAATTGCTTTTGTGGGAAAGTGAAAGATCCAGAGTGGAATCGTCGTGATATTCCTCATTCTTGTGGAGAAGTGTGTGGCAAGGGACATGAAACTCCCGCCCACTGTACTCACACCTGTGTTTTGCTGTGTCATCCTGGACCATGCCCTCCTTGTTCTGTGATGGCATCAAGGAACTGTGAATGTGGGAAAACATCTCAAGTTCTCATTTGTGGTAGAAGCCAAGCTCTTTTGTGTGGAGATGAATGTGGAAAAATTCTGAACTGTGGTGTTCATAAGTGTTCTAAGCTGTGTCATGAAGGACCCTGTGCAGACTGTGAGGTTCTTGTGAAACAAGGTTTTGAAGAACTTCACTGCGAGTGTGGTGCCAGTGTGATGTATCCACCCATTCCATGTGGTGCTCGTCCACCTGAGTGTCAGCAGATTTGCTCACGTCAGCACACGTGCTCCCACGTTCCTAACCACACATGTCACAGTCAGCCAGAGTGCCCTCCTTGTACAGCACTTACTGAACGCTACTGCCATGGAAATCATGAGGCAAGTGAAGAAAAATTATCCTTTGAGCATGGTCGGGCAAGATAa
Protein Sequence
MENWNNTYYNAGDPMEFLGMYGNQQQEAMHCGPLTDYSQNSFFSTLPMAPAIQPTPLEYVERNLMSQNLPPPTITHDDSNALYIPHSGGIYSNMMDHFSAIPLGSLPFPSEPPPSELAEPPDLTPYDHSISGSKRGGRAMNSTRIRSSNRSGSGRIFSGRGNHQVRSTQVTVADPEDASRRNGPESMGASNRQTFSYDNIRGFRGSGRKRSGGNSWSRGPRGGSSRGMPSSRIDTPPFANAFDYSIGREERYRERRQMPNEAAAVSVSLQSENWNKRRQSNTPKDNFRNPNENTRHRQENRRNRYENGSKPLVNGGENVENEYNPVDSEKNQSEDSLDNSDGGRLRTDGRKNFGESMRSSNDHGRSYRDGRRNHPDSSRNKPESWRGGPSRDWRSGGDGSRNYDSGRQGNTTSDRKNQAEFWRFRKEREDDSKERRKNLETDSFGKVVEETSYKVKETEASRREKLEESLRRGNYECMVCCEAVRQRDSIWSCGNCFHVFHLRCIKQWARTSRDDGGWRCPACQTVRESMPYDYNCFCGKVKDPEWNRRDIPHSCGEVCGKGHETPAHCTHTCVLLCHPGPCPPCSVMASRNCECGKTSQVLICGRSQALLCGDECGKILNCGVHKCSKLCHEGPCADCEVLVKQGFEELHCECGASVMYPPIPCGARPPECQQICSRQHTCSHVPNHTCHSQPECPPCTALTERYCHGNHEASEEKLSFEHGRAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-