Cten109141.1
Basic Information
- Insect
- Ceriagrion tenellum
- Gene Symbol
- -
- Assembly
- GCA_963169105.1
- Location
- OY720640.1:77508090-77522149[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.004 3.7 11.1 0.0 1 23 520 543 520 543 0.93 2 10 0.053 49 7.6 3.5 1 21 557 577 557 579 0.94 3 10 1.4e-05 0.013 18.8 3.5 1 23 654 677 654 677 0.94 4 10 0.00052 0.48 13.9 0.5 1 23 778 801 778 801 0.94 5 10 1.2e-05 0.011 19.1 2.7 2 23 836 857 835 857 0.97 6 10 1.1e-06 0.0011 22.3 0.5 1 23 863 885 863 885 0.98 7 10 6.9e-05 0.065 16.6 3.6 1 19 891 909 891 914 0.91 8 10 7.1e-08 6.6e-05 26.1 0.7 1 23 920 942 920 942 0.99 9 10 3e-06 0.0028 20.9 2.2 1 23 948 970 948 970 0.99 10 10 3e-07 0.00028 24.1 1.0 1 23 976 998 976 998 0.97
Sequence Information
- Coding Sequence
- ATGGAAAACCCTGAGAGATCAGGCGAGCTAATGACAAATGTGCAACTTGTGTCGCATCTTGATGAGGAAGTTAAAATAGTCCACGATGGTGTTAAAGGTAGTCGAGATGATGTTACTCTCATCTCTTCAGATGATGTCAGTACTCAATATATGACTTTACACTCAGAACAAACCATTTCGAAAGAGCCCCAAGAGCATTTAGGTGATTGTGATTCGCAATCTGACACTTTGACGGCATCTACTCTGTCGGGAAATGGAGGACAAGGAGAAGAAATGCTTGCTCACGTTGTGCAGATGTCTTCAGGACAACATGCTCTTGTTGTTGATATTATGGAAGCTGTTCCCACTGATGGGGATAAAAATCAGCCACATACTTCTTCACAGCTCAAGGAAGGTGCTTATTATACCACAGTTCCTACAAGTGGAACTACAGTCGGAAATCGCGTGACGCTTTTAAGTCCCGTTTCCGCCGGGAATACCGATCACCACCATCATCACATTCAACACCATTCCGTGCATCACAGCGCAGAATCCTTGCCCGTCGTTTCGCGGGCGTACATTCCAGACACAGATGGTATGGTTGTAGCTACTAGTGGCCATTACAGCGAAACAGGAACAACTGGGGTTGTTGAAGAAGATTTATTAACGCACGATTTGACGGAAGAAGATCGGAGGTTGGCAGCTGCGTTGGTTGCTGTTCAGTTGGTACAGCAGCAAAAACACCAGCTTCatcagcagcagcaacagcagcaaaTCCAACAGCATTTGCCAGTTTGTGTCTCGGATTCCACAAACGTCATTATGAATACCGCTGAAATTCAGGGGTTGATAGGAGTAGGCAAGGGTCTCCATCCAGAAGACACTCATGTGGTTGTAACCACCGATAAGCCGGTGTCGTCTGCTATGGTGGTTGATTACATACAGGCTGTGGAAGATGGTAGTGTTGTTAGTGGCAATCATGGCAAAGGCGATGAAATGGTTGTGGCGTCGCCGCGTATACGAACGAGGGATGTCGATGGTCCCTACGGTCAACCTCACCAGGATGACAACTCGTATGCGAAACTCCATGTGATCCTACCGCATCCGAAAAAGGCCATGATGGGTCAGGGTGCCGCAGTCCGTAATAGGCTGAAAAGGTTCCGGACTGAGATCGAAGAATCTTCCGTAGTGCACATGTTAGATACGAATTCTCCCGTAGTCGATGGTGTTCAGTATGTCACTGTGTCAAATTTAGGTACCACCTTGAAAAATGAACATGGGGAAGTGATGGAaatgatggtgggcgaggaggcAGACGAATTGGGTGAGGGAATTGTGGAAGAGGCAGACGAGGAGGAGATACTTGAAGAGCTGGAAGACGAGGATGAAATGGAAGAGGTTTGCACGAGGGAGGAACTCGAGGCCCTGGATTACGAGACGGGGACTTCCGAGGGCCTCTTGGGGCCTTCCGATCGAAGCTTGCCCCACAAGAAGAGGATCCCACCGAAGCTCAAAGGGAACACATTGGTGATGGACAGCGAGGAGAAGAAGAAACTCTCTCAGGTTCATGTGAAGTGCTATAAGTGCGAGGTATGTGGCGAAGGGCTCGCCTCGCAAGGTGACTACGAAGCCCACAAGGAGCAGATGCACCCTCAGGAGCAATCCATCGACGGCGTCAAGAAGAATCCCTTCACGTGCCTCCTGTGCGGCCAGGCTTTCCCCAGCCAGTTCAAGTTCTTCGAGCACCTCAAGTGCCATTACGAACCCCTGCTCGAAAACGATCAAACCCAGAGGAAGGTCAAGGAGGAGGACGCCGAGGTCAAACACGAGGAGGAACCCTTAAATCAAGTTGAGAGCGTGGAGATGACCCTGGTTGACGAGAGCCAACACGTCGTCACTCGAGCTCCGGAGGAGATGGCCCAGAAAGAGATACACATCATCCATCACCAGGAACAACCCCCGGGAGTCGAGCTACCGGCCTTCCTCTGCACCCACTGCAACAAGACATTCCGACGGCAAAAGGCTTACGAGACCCACATGAACCTCGTCCACGGCCCGGAAgacgaggaagaagaggaggagcaACATCAGCAGCAGCACACAATAACCCATGGGACAGTCTTGGAGGAGACGGTTGTGGTCACGTCCAAGAAGGACCAGCAGCAAACCGAGTGGATACCGACGTTCTTCGCAGACGAtgacgacgatgatgatgatgacgaggaCGACGAATGGGGAGATAGCGACGCCCTGGACCGTCCTGCCCGGCGTCGACAGCAGAACTCCGGCAGCGCCTCGGGAGACGTCGCGAACGACGGCTCCACCGACGGGCAAGGGATGGGAATCCATCACCACGTGTGCGAGGTGTGCGGCGGTGCCTTTCAAAGCCGGGCGCAGCTGAACCACCACATCCAGGATGAGCATCCGGAGTCGGCACACTCCGGGAACCAAAGGAAGAAGGCCAGAAAGGGTGGCGGAGGCGCCTCCGGTGGTGGCGGCGGGAGCGCCCGGAAGATAGAGCACATGACCTGCACCACTTGCGGTCGAGTCTTCAACCACCGCAACTCCCTGGTGTACCACATGCGGAGCCACACTGGGGAACGACCCCACCAGTGCGAGGTGTGCGGGAAGAGCTTCTTCGCAGCGAGCGCCCTGAAGGTGCACATGCGTCTGCACTCGGGCGACAAGCCGTACAAGTGCGAGTACTGCGGCCGTCACTTCCGCCAGTGGGGAGACCTCAAGTATCATTGCATCTCCATACACTCGGACGAGAAACAGTACCAGTGCGAGTACTGCGGTAAGGACTTCGCTCGCAAATACAGCCTGATTGTCCATCGAAGGATCCACACTGGTGAGAAGAACTACAAGTGTGATTTTTGTGAGAAGAGCTTCCGTGCCTCAAGCTACCTTCAAAACCATCGCCGCATCCACACTgGAGAAAAGCCTCATCCCTGTGAAGTATGTGGAAAGCCATTCCGTGTGCGCTCTGACATGAAGCGGCACATGCAGACGCACAACCGGGAAACTGCGGTCACTACTGTCACGACCGTCACGACCATAGCAACCGACCCGCTGGCAGCAAACGGAAGCCAGACCATGGCATCGGATGGTGACCCGTCCCCACCCCCAGACAGTGAGGATCACCAAGTGCGCCATTCCAGCTTGACAGGGTCTCCGCATCACCACACCATGGACCCTTCAGGCACTCTCCTCGGCACCGAATTGGTAGTAACCACAGACACAAGCAAAACAGAGCAGATAACAGAAGAGGAGGCTGAGAGCATCTTGCCTGATGATGGCCTTGGCAACCATCAAGCAGTGACCACGGCCGTGACATCAGCTCAGCACACTGTCTCGCAGCATGTTTCCTCGCAGCCTATCGACTTGAACTTGGTCCCAGGAAGAGCAGGAGTGTCGATCCAGCAGGGTCACCTGTCGGCCGCAGTGACTGAACAAGTCGTACAGGAAGTGCTCCATTATGCCAGGGACCCCCTTGAACAAAGGGACAATGCCAACACACTGTATGTGTGGCCCATATACATGTCATAG
- Protein Sequence
- MENPERSGELMTNVQLVSHLDEEVKIVHDGVKGSRDDVTLISSDDVSTQYMTLHSEQTISKEPQEHLGDCDSQSDTLTASTLSGNGGQGEEMLAHVVQMSSGQHALVVDIMEAVPTDGDKNQPHTSSQLKEGAYYTTVPTSGTTVGNRVTLLSPVSAGNTDHHHHHIQHHSVHHSAESLPVVSRAYIPDTDGMVVATSGHYSETGTTGVVEEDLLTHDLTEEDRRLAAALVAVQLVQQQKHQLHQQQQQQQIQQHLPVCVSDSTNVIMNTAEIQGLIGVGKGLHPEDTHVVVTTDKPVSSAMVVDYIQAVEDGSVVSGNHGKGDEMVVASPRIRTRDVDGPYGQPHQDDNSYAKLHVILPHPKKAMMGQGAAVRNRLKRFRTEIEESSVVHMLDTNSPVVDGVQYVTVSNLGTTLKNEHGEVMEMMVGEEADELGEGIVEEADEEEILEELEDEDEMEEVCTREELEALDYETGTSEGLLGPSDRSLPHKKRIPPKLKGNTLVMDSEEKKKLSQVHVKCYKCEVCGEGLASQGDYEAHKEQMHPQEQSIDGVKKNPFTCLLCGQAFPSQFKFFEHLKCHYEPLLENDQTQRKVKEEDAEVKHEEEPLNQVESVEMTLVDESQHVVTRAPEEMAQKEIHIIHHQEQPPGVELPAFLCTHCNKTFRRQKAYETHMNLVHGPEDEEEEEEQHQQQHTITHGTVLEETVVVTSKKDQQQTEWIPTFFADDDDDDDDDEDDEWGDSDALDRPARRRQQNSGSASGDVANDGSTDGQGMGIHHHVCEVCGGAFQSRAQLNHHIQDEHPESAHSGNQRKKARKGGGGASGGGGGSARKIEHMTCTTCGRVFNHRNSLVYHMRSHTGERPHQCEVCGKSFFAASALKVHMRLHSGDKPYKCEYCGRHFRQWGDLKYHCISIHSDEKQYQCEYCGKDFARKYSLIVHRRIHTGEKNYKCDFCEKSFRASSYLQNHRRIHTGEKPHPCEVCGKPFRVRSDMKRHMQTHNRETAVTTVTTVTTIATDPLAANGSQTMASDGDPSPPPDSEDHQVRHSSLTGSPHHHTMDPSGTLLGTELVVTTDTSKTEQITEEEAESILPDDGLGNHQAVTTAVTSAQHTVSQHVSSQPIDLNLVPGRAGVSIQQGHLSAAVTEQVVQEVLHYARDPLEQRDNANTLYVWPIYMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00261382;
- 90% Identity
- iTF_00261382;
- 80% Identity
- -