Basic Information

Insect: Ceriagrion tenellum
Gene Symbol: -
Assembly: GCA_963169105.1
Location: OY720638.1:35046247-35056797[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3.9e-08 3.6e-05 26.9 0.4 1 23 70 92 70 92 0.96

2 8 2.3e-07 0.00021 24.5 0.5 1 23 98 120 98 120 0.97

3 8 2.1e-07 0.0002 24.6 0.4 1 23 124 146 124 146 0.97

4 8 2.7e-05 0.025 17.9 1.9 1 21 152 172 152 174 0.95

5 8 4e-07 0.00037 23.7 1.3 1 23 180 202 180 202 0.98

6 8 2.3e-07 0.00022 24.4 1.7 1 23 208 230 208 230 0.98

7 8 1.5e-07 0.00014 25.0 0.1 1 23 235 257 235 257 0.98

8 8 0.82 7.7e+02 3.8 0.9 1 9 263 271 263 271 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3.9e-08	3.6e-05	26.9	0.4	1	23	70	92	70	92	0.96
2	8	2.3e-07	0.00021	24.5	0.5	1	23	98	120	98	120	0.97
3	8	2.1e-07	0.0002	24.6	0.4	1	23	124	146	124	146	0.97
4	8	2.7e-05	0.025	17.9	1.9	1	21	152	172	152	174	0.95
5	8	4e-07	0.00037	23.7	1.3	1	23	180	202	180	202	0.98
6	8	2.3e-07	0.00022	24.4	1.7	1	23	208	230	208	230	0.98
7	8	1.5e-07	0.00014	25.0	0.1	1	23	235	257	235	257	0.98
8	8	0.82	7.7e+02	3.8	0.9	1	9	263	271	263	271	0.90

Sequence Information

Coding Sequence: ATGCTTGGGCTAGCCTGGGCAGCAATCCAAGCAGCCGTCGACTTGAGGGCCAATGTAACTGCTGAGAATCTACCTCAAAATAATGATCCTGCTGGGAGCGAGTCGAGAGAGGCGGAACCTGTGGGATCAACCGCTACTGGGTCCATTCCAGCCTTAGCTGACCCTCAGGGAAGTGGTCAGTCAGGGCGAGGTTCATCAGGGAAACCATACTCGTGTGAAGTGTGTGGGAAGTCTTTCATGCGGAAGACAAACCTCAATGCTCACATGGGGAACCATACCCAGGTGAAGCCTCACAGTTGCGACATCTGCGGCAAGAGCTTTGTGGTGCGCTGGGACCTTACCTTGCACCAGAGGATCCATGCTGGGCTGTTTGCGTGCGAGTTTTGTGGCAAGGCATTCTCGGTGAAGGGGAAGCTGGAGCGCCACCGCCGGGTGCACACTGGTGAGCGCCCGTTCTCGTGCGATGTGTGCTCAAAGGCGTTTGGTGACAAGCGCAACCTGGAGGCTCACCGACGCTGCCACACGGGCGAGCGACCCTTTGTGTGCCTCGTGTGCGGGCGCAGCTTCCGTGTCAACTCACACCTCTCAGACCATCGGCGGGTGCACTCGCAGGAGAAGCCATTCACATGCCACATTTGTGGAAAGAGTTTCAAGTGGAAGGCCAACTTGAACATCCACCTCCGGCTGCATGCTGGTGAGCGCTTCCCTTGTGAAGTGTGTGGGCGGGAGTTTGCGCGGCAGGCTGACCTCCGCAAGCACTCGCGTGTCCACTCGGGCGAACGACCTTACCCATGTCACGTCTGCAACAAGAGGTAA
Protein Sequence: MLGLAWAAIQAAVDLRANVTAENLPQNNDPAGSESREAEPVGSTATGSIPALADPQGSGQSGRGSSGKPYSCEVCGKSFMRKTNLNAHMGNHTQVKPHSCDICGKSFVVRWDLTLHQRIHAGLFACEFCGKAFSVKGKLERHRRVHTGERPFSCDVCSKAFGDKRNLEAHRRCHTGERPFVCLVCGRSFRVNSHLSDHRRVHSQEKPFTCHICGKSFKWKANLNIHLRLHAGERFPCEVCGREFARQADLRKHSRVHSGERPYPCHVCNKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -