Cten149225.1
Basic Information
- Insect
- Ceriagrion tenellum
- Gene Symbol
- -
- Assembly
- GCA_963169105.1
- Location
- OY720645.1:24773118-24806874[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.5e-05 0.014 18.8 3.9 1 21 302 322 302 324 0.94 2 16 1.2e-08 1.1e-05 28.5 0.5 1 23 349 372 349 372 0.98 3 16 5.8e-06 0.0054 20.0 1.9 1 23 375 398 375 398 0.97 4 16 9e-06 0.0084 19.4 0.9 1 23 404 426 404 426 0.97 5 16 2.1e-05 0.019 18.3 0.6 1 23 434 457 434 457 0.97 6 16 3e-06 0.0028 21.0 0.2 1 23 465 488 465 488 0.96 7 16 0.0014 1.3 12.6 2.8 1 23 494 516 494 516 0.93 8 16 0.00043 0.4 14.2 3.6 2 23 523 544 523 544 0.97 9 16 0.0094 8.8 9.9 0.0 2 23 550 571 549 571 0.96 10 16 5e-08 4.6e-05 26.5 1.6 1 23 577 599 577 599 0.98 11 16 4.6e-07 0.00043 23.5 0.9 1 23 605 627 605 627 0.98 12 16 0.0024 2.2 11.8 1.0 3 23 635 655 633 655 0.98 13 16 0.093 87 6.8 1.5 1 22 661 682 661 683 0.90 14 16 6.2e-05 0.058 16.8 1.0 1 23 692 714 692 714 0.98 15 16 1.3e-07 0.00012 25.2 0.4 1 23 720 742 720 742 0.97 16 16 1.6 1.4e+03 3.0 1.0 3 23 754 775 752 775 0.93
Sequence Information
- Coding Sequence
- ATGGTCTATTGTGCCTTCCAGATGATCTCTCGTGCCTTCCCTATGGTACCCGTGAAGACAGAGCCAAGGGAGACGAACGATGAGAACAATAGAAGTGAATCTGCCGACAGTGGTGACGAGAACTCGGGTGACGGTGGGAACGAATCAGATGGCGATGGAATCCAATCGGAGGTACCCGTGAAGACGGAGCCAAGGGAAACGGATGATGAGACGAAGGGAAGTGAATCTGCCGACAGTGGTGACGAGAACTCGGGTGATGGGGGGAACGAATCAGATGGCGATGGAATCCAATCGGAGGTACCCGTGAAGACGGAGCCAAGGGAAAAGGATGACGAGACGAAGGGAAGTGAATCTGCTGACAATGGTGATGAGAACTCGGGTGATGGGGGGAACGAATCAGATGGCGATGGAATCCAATCGGAGGTACCCGTGAAGACGGAGCCAAGGGAAACGGATGACGAGACGAATGAAAGTGAATCTGCTGACAGTGGTGACGAGAACTCGGGTGACGGTGGGAACGAATCAGATGGCGATGGAATCCAATCACAGACGTCTGATGAGAGTGTTTCCAGTGACGAGTGGATGCCTGCCAGGAGACAAACTGGAAGACGCAAGAGGAAGGATACAGAAATTGCGAGAGGGATTGGACAGTCTGAGGGTCGTCAACCTGAACTCGaaccCAAGGCCAAGCGCCGAAGATTGGAGCCACGTGTTCTTGTGGATGAAGAGAGTGTTTTGAATGCTGTGGACAAAACCGATTCATCAGGAAGAGAAATAGGGGCACCTGAAAGCAAAGATGCAGACAGGAAGAAGCCAGTGAGGGGGAGGAACTCAGTGAAACGAACTGGCAGTATTGTGGTCAGTAAATTGAGAAAGGATTCAGGAATGTCAGAGGTGCCGAAACACAAGTGTAAAGATTGTGGGAAGGTGTTCACCTCAAAGGTATTGTTGGAGAATCATGTGAAATGTCACTCAAGCCAGAATTCAGGTGAGGCTCAGAGTGGTGGACCagtgaggaaggagaaggaaggcaGTCGAACTTCTTACGAGTGCAAAGATTGCGGGAAGCAGTTTCCACAACAAAGAAATTTGAATGCACACATCAGGAAAGAGCACACGGTCTTCGTGTGTGATACTTGCCAGAAGGTCTTTAAGCAGAAGGTGCACATACAGTCTCACATCAGAAGCGTCCACCTGAAGGTCCGCAGCCATTCCTGTGGGGTATGTGGGAAGGCGTTTAGTACCAAGAACCTAGCTTCTGTGCACatgaaaacacataaaaaatcaAAGGAGAAATCTCACAAGTGTGGGGACTGTGGAAAAGGGTTCTCTTCGGTCAGGAGCGTGAAGATTCACATAAGGAACATCCACCAAAGAGATCAGTGCGAGAGATTCAAGTGTGACCTTTGCCCGAGGGAGTTCCAACAGAAGTCCAACCTGGAGATTCACATAAAAGGGGTCCACATTGGGGAGAGGAAGTTCGCCTGCAAATTATGTCCGCAAACATTCAAGAGAGCAGAACATCTCAAGTGTCACATGGGGGCTCATACTGGGATCCATCCTAATGAGTGCGAAATATGCCACAAGACATTCCAATGGCCGAATCATCTAAGGAGGCACATGGAACGTCACAGTGGAAAGAAGGTTTCCTGTCCCATCTGCTCGAAGGAAGTCTTGGATTCATCATTGCTGCGATCTCACCTTCTGGTGCACTCCAACAAGCGACCTCACCAGTGCAAGGAGTGTCCCAAGGCTTTCAAATCCAAGCCCAACCTGACACTTCACATGCGTGTCCACTCTGGGGACCAACCTCACGAGTGCTCAGTGTGTGGAAAGAAGTTCTCTATCAAATCAAACCTGGGGGTTCACATGCGAATCCACAACGGTGAGAAGAGGTTTGGTTGCAACATCTGCTCGAAGACATTCCTTCTCAAGAATACTCTTCAGAATCACATCCTCACACACTCGGACGAGAAGCGATTCCAGTGTGAAGTGTGTGGCAAGTGGCTCAAGGGCAAATCATGTTTATATCGTCACTCTGTTCTGCACACGTCAGCCGTGAATGAGAGGCCATTCAAATGCGACATTTGCTCAAAGGCATTCCGGCTCAAATCAATCCTCCAGTCGCACATGTCGAGCCACACTGGCGAGAAACCCTATGCGTGCCAGGTGTGCTCCAAGGCATTCTCCCAGAAGTCGAACCTCAGGGCACACTTGGATACTCACGAGGTGGACAGGAATCGCAGAAAAGTCTTTGGGTGTGACAAGTGTGAATTCACCACAGTCAACAAGTATTACGTGAAGTTTCACATGAAGGCATCCCATGGTCTCTCCGCTCGTTCCTCTGCTTGCACTTTACCTTTCACATTCCTCTGGTGTCCGGCCGCTTCATTCCCACCCATAGTTGCTGCAACATCAGCGACCTATGAACCTCACGCCATGACGACGACGGCAAATGCGAGAAGTAAGTGCCGATCACGTGGAGATGCCAAAGGTGAAGCTTGGAATGCAAGCGGCTTCTTGGCGGATAGTCGATCATGA
- Protein Sequence
- MVYCAFQMISRAFPMVPVKTEPRETNDENNRSESADSGDENSGDGGNESDGDGIQSEVPVKTEPRETDDETKGSESADSGDENSGDGGNESDGDGIQSEVPVKTEPREKDDETKGSESADNGDENSGDGGNESDGDGIQSEVPVKTEPRETDDETNESESADSGDENSGDGGNESDGDGIQSQTSDESVSSDEWMPARRQTGRRKRKDTEIARGIGQSEGRQPELEPKAKRRRLEPRVLVDEESVLNAVDKTDSSGREIGAPESKDADRKKPVRGRNSVKRTGSIVVSKLRKDSGMSEVPKHKCKDCGKVFTSKVLLENHVKCHSSQNSGEAQSGGPVRKEKEGSRTSYECKDCGKQFPQQRNLNAHIRKEHTVFVCDTCQKVFKQKVHIQSHIRSVHLKVRSHSCGVCGKAFSTKNLASVHMKTHKKSKEKSHKCGDCGKGFSSVRSVKIHIRNIHQRDQCERFKCDLCPREFQQKSNLEIHIKGVHIGERKFACKLCPQTFKRAEHLKCHMGAHTGIHPNECEICHKTFQWPNHLRRHMERHSGKKVSCPICSKEVLDSSLLRSHLLVHSNKRPHQCKECPKAFKSKPNLTLHMRVHSGDQPHECSVCGKKFSIKSNLGVHMRIHNGEKRFGCNICSKTFLLKNTLQNHILTHSDEKRFQCEVCGKWLKGKSCLYRHSVLHTSAVNERPFKCDICSKAFRLKSILQSHMSSHTGEKPYACQVCSKAFSQKSNLRAHLDTHEVDRNRRKVFGCDKCEFTTVNKYYVKFHMKASHGLSARSSACTLPFTFLWCPAASFPPIVAATSATYEPHAMTTTANARSKCRSRGDAKGEAWNASGFLADSRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -