Basic Information

Gene Symbol
Mblk-1_1
Assembly
GCA_963169105.1
Location
OY720633.1:63322041-63339834[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.1e-18 4.4e-14 54.9 0.1 1 45 11 56 11 56 0.96
2 2 2.5e-18 1.3e-14 56.5 0.0 1 43 499 542 499 544 0.95

Sequence Information

Coding Sequence
ATGAGTGCATTGGGCAGCCGAAGGACATACACAGAAGAAGAACTGCAGGCTGCCTTGCGGGATATACAGAGTGGCAAGTTAGGCACAAGGAGAGCAGCAGTCATCTATGGCATTCCCCGGTCCACCCTGCGCAACAAGGTGTACAAACTGGCAATGGAGCGAGAGAGAAACCACACGGGTGGTTTGGGAGGTCCTGGCCCACGAGGCGGCAGGGGCATGACGGGGCCCCGAGGGGGCTACTTCTCTGCAGCGGCAGCCGCTGCGGCCCTCACACACAGCCCTGCGATTGCGATGGAGATGCGAGGATCTCGAGGgatggatgaggaggaggaggaggagagcgatGTGGTGATGGTCGCATCCGGACGAATCAAAGGCGAGGCAGCTGAGGGACAGGAGGATGCAAACGAGGATGAACGGATGAGGAGGATGGTGGACGGAGAAGAGGCTGAAGGTAGGAAAGTTTCGCTCTCAATGGACGATCTGGTGCGTTACTCTGGGCTGGATAGCCTTGCCACAACGGACTCGCTCCGACAGCTCCTCCAAGGCGGTCCGAGCAACAGGGGCAGTGGGATGGGTGTCGGCAACAACCCCTTTGACGTCTTCCCCTCCCCCGACTTGCTGGACAAGGCAGCCCTTGCCCCGTACATTGCGAACATGTTTGCTGGCAGTGGCATGTTTGGAGGGGATGGGCCAAGCAGGCAGGAGGGCACCTCGAGCCCTGGCATGGATTCGATCAAGAAGAGGGCCGGCCTGAGGCACCCGGCACACCTCCCAGAGCTCATGAGGCGGATGGCGGTGGAGAGAGAGGTGGGCGGGAGGGTGAACGGGTACCATCGGGATGGGCTGGAAGGGGGCAGTGGCGATGCCTGCGGGCTGGAACATGACGAAGGAGAGATGCCGCCTACCATGGTGGGAAAGAGTTCCGATGGTAGTGTGCTGCCAACGGAGGTGGCTGAGGGAAGTGTCGtgcagagagaggaagaggggagccGTGAGGCATCTGTGACTAGCCCTGCTCCAAATGTGATACTGAAAATTCCGTCCTACAAGCCAACCAAGAATGGAGTGGCGGGGGAAGAGTCTAGTCAATCTGTAGCCTCTGGTGGAGGAGGTCCAACTTGTGCCGAAGTTGGTAGTGAATCCAGTTCTCCCATCCCATCACCGGCTGTCAGTGTGGGGGGCTTGAGGGCTCTGGGGCCCAGAGAACTAGTGGCTCGTGCAATGGTTAGCCAAAGGTTTGGCATGGTTGACCCAGTGGTATCAAGTGCAGAGAAGAGGGTGGGAAATATATTCCAGGATACGAAAAGGGGAAGGTATGGTAGTGATGTTGGTTCAAGCCAGAACATGGCTTGCGACGCTTCCAAAGCATCTACTGCAAAGACTGCCACTTCGGCGACAACTGCCTCTACTACAACGACGACATGCACAACTGGCACAAATGTGACAGGTGGGAAAGGAACACGCCCCAAGAGAGGAAAGTATAGAAACTATGACCGGGATAGCTTGGTGGAGGCAGTCAGAGCTGTGCAAAGGGGAGAGATGAGTGTCCACAGGGCTGGTTCCTATTATGGTGTGCCTCACTCAACGCTCGAATACAAAGTCAAAGAAAGGCATCTCATGAGACCTCGCAAGAGAGAGCCCAAGGGCCAACAGCATAGCCTGTTGGGGAAGCAGCACCAGATGTCTCATGTGAACTATTCATCATCGGCCGAGATGGGTGACAGGAAGGCAGGCATTGGTGTTGGGCCTGACAAAATCACCAAGCCTTCCCTAAGTTCAGCTCTACCGCATGTCAAATCCAAGGTCCCGCAGACGTTCGGAAGCCCCCACTGCGgtccacccctctccctcctcccccccaatgGTGGCCTCAAGCTGAGGTCACCATATGAGGGGAACCCTTCTACGCTGCctgcttccccctccccttcatcATCCTCCCCATCATCGGTCTCATACCCCTCCACCGCTCCCCACCCGAGTGCTGCAGCTTTCCCCTTCTGGCCCCCTTCAGCTGCTGCAGCCGCGGCCGCATTTCAGTCCCACCTGCCCATTGAAATATCACGGGAGCAGATATTTGCCTCCGCCATGATGCAGATGCTGCAGGCGGACGCGACTGGGGGCGCTGCCGTGGCTGCTGTCGTGGCTGGCCGACCTGGTGCCCCAGGTTCTGCAGGTggaatggcagggggtggtatggGCAACAGTGGGAATCCTGTCGCCACAGCCGCAGGAAGCTTCCTTGATGGCCTCATTCGATCGAGGTTGGAGATGGGGATCCCCGGTGGGGAGACTGCCGGGGGCAGTATTGGTGGGGGTTTGATGAGTGGAGGAAGGTTGGCACCGGAGGGGATGTCGAACGTGACGCTGTTGGACCAGCTATGCCGTAACAGTCGCCTTGGCACGCTTTCGCGCTCACCTCCAAggtcccccccaccccctcctgtACCCCAGCAGCCAACCCCTGAGGCTGTAGTGGACTTATCCAGAGTGCCCGGGGATGATGATGAGGGCGAAGTGCAGAAGGACGATGGTGTGGTTGTAGAGCCTACTGAGGTGGacttagaagaaaataaaaatttgactgatGACAGACATAATATGGAGGAAATATCAGATTCAAAATGTAGTTTGAAAAGTGCCTGTGATAAAAAGGAAGGATCAGCAGCCAAAGATGGTGATGATGACTGTGTTTCTTGTCCAGTGACTGAAAATGCTGATCATAGTGTTGTGGATTCAGAGTTGGGAGATGTGGAGGTGATGGTGGATGTGAAAACTGCCCGCAAGTTATCTGAGGGAAGCTCAGAAATTCCGGTAGGAGAGACATTACAAAGTGAGGATATTAAGTCTGAGAAGAGTCTTGAAGTGTCCGAAGAAGGAGTTACAGAATCTGCCAGTCCTCCTCctgaggtaagggaggaaattaaaaatgaggaaaataccaAATCAAATGTCGACTGA
Protein Sequence
MSALGSRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERNHTGGLGGPGPRGGRGMTGPRGGYFSAAAAAAALTHSPAIAMEMRGSRGMDEEEEEESDVVMVASGRIKGEAAEGQEDANEDERMRRMVDGEEAEGRKVSLSMDDLVRYSGLDSLATTDSLRQLLQGGPSNRGSGMGVGNNPFDVFPSPDLLDKAALAPYIANMFAGSGMFGGDGPSRQEGTSSPGMDSIKKRAGLRHPAHLPELMRRMAVEREVGGRVNGYHRDGLEGGSGDACGLEHDEGEMPPTMVGKSSDGSVLPTEVAEGSVVQREEEGSREASVTSPAPNVILKIPSYKPTKNGVAGEESSQSVASGGGGPTCAEVGSESSSPIPSPAVSVGGLRALGPRELVARAMVSQRFGMVDPVVSSAEKRVGNIFQDTKRGRYGSDVGSSQNMACDASKASTAKTATSATTASTTTTTCTTGTNVTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKGQQHSLLGKQHQMSHVNYSSSAEMGDRKAGIGVGPDKITKPSLSSALPHVKSKVPQTFGSPHCGPPLSLLPPNGGLKLRSPYEGNPSTLPASPSPSSSSPSSVSYPSTAPHPSAAAFPFWPPSAAAAAAAFQSHLPIEISREQIFASAMMQMLQADATGGAAVAAVVAGRPGAPGSAGGMAGGGMGNSGNPVATAAGSFLDGLIRSRLEMGIPGGETAGGSIGGGLMSGGRLAPEGMSNVTLLDQLCRNSRLGTLSRSPPRSPPPPPVPQQPTPEAVVDLSRVPGDDDEGEVQKDDGVVVEPTEVDLEENKNLTDDRHNMEEISDSKCSLKSACDKKEGSAAKDGDDDCVSCPVTENADHSVVDSELGDVEVMVDVKTARKLSEGSSEIPVGETLQSEDIKSEKSLEVSEEGVTESASPPPEVREEIKNEENTKSNVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00261247;
90% Identity
iTF_01286294;
80% Identity
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