Basic Information

Gene Symbol
Jarid2
Assembly
GCA_963169105.1
Location
OY720632.1:159025275-159035966[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-16 8.3e-12 48.3 0.0 6 67 1929 1990 1925 2000 0.91

Sequence Information

Coding Sequence
ATGGAGCTTATAGGAAAAAAATGGACTACGCCAGAAGAAGATACTGGAGAAGATGACTTAGTTGCTCTTGTAGACTTTCCTGATGTGCGGAAGTTCAATAAGTCAGGTAAAACTGAAAATGAGAACAAGACAAAGACTTCAAGTGAATCTTCCAAAAAAGAAGTGACtccactcaaagaaaaaaataggccCACCCCTAAAATGGAGGCACCCTCTCGAAGAGTTTCTGATACCagcaaagaaataattaatgatgatAAGGGAAAAAAGAGTGTGAAAGACAAGGCTGAACCTAGCAAATCTAACATTAGTAAAGAAAAGAAACATACATTATCCCACAAGGAAAGAATTCTTCGAGAAAAAATGCGGAGGAATGCTGGCAAAGTTATTTGTAACAAGACTGCCCATTCCAAGTGTATTACAGGTGGAGCTGCTGGGAAGAGAGTGATATTAAAAGCTAAGCCACAAATTAGACAAGTTCAAACAAGAAATAGGACCCTACGGAGTGACTCTTCTGATGATGTCTCCAAGAAGCAGCCCATTTCAGGGAAAGTGGTAGTAGCAGATGACTCAGAAGATAAACTGAAGACAAACCGTATGACTCGTCAGAGCATTAAAGGATCAGATGAGGCCAAGGTCAGCATTGCTCCCAAGATAGCTGTTGAAAATAAGAGTGAACCTAAAGCCAAGTCATCTGATGGGGTTAATTCTCCTGTCCACCCACCTCGACCGCTGCGAAAATCTGTGACTAGAACTGATGCTATAAATCTACAGCAGACTTCTAGTCAATCTGAAGACAAGTTCAGTGACTCAGATGAAGAACCTCTGGGTCGTAAGGTGATAAAGAATTTAAGACAGTCTGGAGGTTCTGGTAAATCTTTGCCTGACAGCAAAGAATCGAGTGAAAAGTCAaagttaattgatttaaaatcaGAAGACAAATCAAAAGATATCAGTAAAAAGGCTGAAGAGAAACTTAAAGATCCTGTGAAAAAGAAGGATGAAAAGCCTAAAGACTTGAACAGAAAGGTTGCTGATAAAACTAAAGATGCTAAAAAAGTTATTGATAAACCTAAGGATGTTTTAAAAAAGGGTGATGGAAAAATTGTAGATGATGGTAAAATGAGTGATAACAAGAATAAGGAAGTCAATGTAAAAAGTGATAATAAAGATAAAGATATTGGTAAAAAAGCAAATGATAAAAGTAAGGAAGTGCCAAAAAAGAACAGTGAAAAGAAgaagagcattacaaaaaaagTGGATGAAACTTCTAAAGAGGTTAATGTGAAAAAATCTGATGATAAGCCAAAAGAGACTCACAAAAGAGCTAGCCTCATCGCAAAGAGAGCTGAAACTGTTGacaatgaaatacatgaaatttcAACTCGGGCTCGAAGTCTAAAAATCAGTACTACTGATGCAGACAGCCCGAAGGCTTCCAAATCTTTGGCTGCTGAAAGTGAAAAACCTGTCAAACCACCAGCATTAAAAGATGAGGATCCCCCGAAGGACAGTAAAGATACTGAAACCCCTCGCAGTACAGTGCAGAAAAAGTCTGAACCCTCATCAACTGGTGATGATGCACAAAAGAGAATcacaagaaatgagaaaatgtttaagaCTCTTGACCAGTCACCCAAAGCAGAAGAAAAGCCTTTAAAGAAAAAGACTGTTGTCGAGGGTGGGAATGTGTCATCTCCGAAAGGTAGCAGTATTGTGAAAAGTAAAACCAAAGAAGTGTCTGCTAGTGAAGTATCTAAAGATGCTATCATTAATATCCCTAAACCTGATGGGAAGAGGCCTCTTGAATCATCTGAGAAAGCCATTGGTCAGAGTGAGTCGAAAAAGTTCAAGGGGAGTAGTGCTACTGATACATCTAAAGCATCTTCCGCTCTAATGTCAAAACCAAGTGAACCGTTACATCTCCCAGAGAAGGCTCCATCTAAATCTCCTATTGTGGAAAAATTTTCTGCTGTTGGTAGTAAGGTTGATGAGGCTCTACAGTCGATGAAAAAGGATGCCACTTGTTCTTTGATTTCAGACACTGAAGTGCCTGTTGAATTGGCTAAGGTTGAAACAGGTGCCAAAAAGAAACAAACCAGTGGTACACATCAGCCGAAGAAAGAACCAACCAAGCATCCGCCTCCCAAAAAATCCAGTGCTGCCCTGGACCCTAGTGTAAAATATCGTGAACCAGTAGAAATACGTTGCGATAAGATGTGTGAGAAAAGTAAGCTTTTTAGCATAGAAAAGCAGGCTCATGGGGGCCTAGTATTAGTCAAAAAGGTCCCATCTATGGAAAGTATTGAGAAAGTTTCTCCCTTGAGTAATGCTCCAGAGTCTAAGAGCCAAGATTCTTCCTCAGCGGATGTTGAGTCTAAAAGGAGTGACGTCATTGCTACAGGGTCATTTTCTTCTATTACTATACCTAAAGTGCCCCATATTCCTTTGCCTGGAGTGTTTACCTGCAGCTGTAAATCATGGGTAACAATTCCAGGTAAACTCGCCTCTGCCAGCTGTTCTTCATGCCCAATTCATGGTGAAGGAACAAGTTTAAGTGAGATGGCAGTGAGTGAAGAACAGAAAGCAAAAGATGTGGACTCGCCATCGAAGGACTCAAAAAAGGGTGTAGATGAAGTAGCAAATGCTGAAAGTGTGCACAACACATCAGTGTTTGGAACTGATGTGGATTCTTTCAATGACATTGAGTGTGCTGACAATGAGGTGAGGCGAAAAGTCAGTAAGACAGTGGAAGAAATTGAAAAGTGGTTGTTAGTTAGTGACAGTATAAACTCAGGAAAAAATTCAGAAGATAAGAACCATGAGGATAATGATTTGCAGGCCAATAAAATTGAGTTCGATAATATTCGTGAGTCAATGCTTACTGACATCAAAGCAGTCCGTGTTGATGGTGAGGATAAGGGTAAAGATAGTAAAACAGTGGTCAGTTCTCAAATCAGCTCAACTTTAGAAAGTGTTGAGAAAGGCACAGGGATACCTCTACAAACCTTTTATAATCGTGGAATGCATAAGGGCTTGCCTAAAATACCTGATCCTTATGCCTCAAGAACACACAAATTCAAGGAAGATAAAAGTGCAGGATttagtaattcaataaatttagtaTCCAAACTGGTGCAAAAAAGAGATACTATACAGTTAAAAGATGATAAGGCATCTGTTAAACAGAAGGTGGAGGCGGgtatttcttctgaaaatattAGTCCATTGAAAGGTGATAAGGCATCTGTTAAACAAAAGTCTGATATTGGTGGATCACCTGGAAGTCTTATACCATTGAAAGGTGATAAGGCAAGCATTAAACAGAAAGTGGATACTGGTGGCTCATCTGAAAATACAATACCTTTGAAAGGTGATAAGGCAGCCATTAAACCGAAGGTGGAATCTGGTGGCTCctctgaaaatgttttacctttgaAAGGTGATAAGGTATCCATTAAACAAAAGGTGGAAGCCGGTAGCTCGTCTGAAAATATTACACCACTGAAAAGTGAAAAGGTATCCATTAAATCAAAGGTGGATGCCAGTTGCTCATTTGAAAGAACACTGAAAAGTGGAGAAACTTTAACCGAGGCAGAAGATGGCATGGTTAAAGAATCACCTGCTGGCATTCCATCCCAGAGCAGTAAAACAAGTTCCCCACCAGCTAAGGTTAAGATAGAAACCAAGAGAAGTCCTACTAAAAGTAAAATTGGAGGGATGGTCACTGGGGTGAAAAAAACTAGTAGTTTAAGGAATTTTAGAATGAAGCATGACGTAAAGATGAAGACTGTGAAAGAGGAGGCTCTTGTTTTAGCTCCAAGCACTTCAAAAACTCCTTCTCCGATTGCTGCTTCTCCTGTAAAAGGGACATTTCAAGCAGCTAAGTCTCCTGTTAATGAAGCATCCCAAATTTCTCTGCTGAACAGTTCTTCCAGCTCGGATGACATTGCGCTGTCAGTTATTAAAAGTGAAGCGATTAAATCCCAACGTGCTTCGGATCATGGAGTAATAACATCTACACCTGAAAAGAAACCAATTATTTTAAAGGGGGGTAATAATTTCACTGTGAGAAAGTCAAAGGAATGTTTAATTCGTCGTACACCGAGTGTGGGTGCTTTCTCACCAGAAAATGAGAGCAGTGTTTATGCATTTGAAACAGAAGATAGAGAAGCCACTCCCATTTCCACTCCTTTTAGGAGAAAAACCAAAGATGGAGGCACCAATACCTCCCCAGATAAACTCCACCATCGTCATTCATCTTCATCATCGGAGAGCTCATCTTTCATGTGCAGTGAAGTTGGGTCCCCAGTTGCCAAGTCTTTCTCCTCTGGAATCACCCACATATCAAAGTCAGTCACTCCAGATAGTCCACCGAGTGGAGGAGGCATGGATAATGCTGTCAAAAATTCAACGTGCACCACTTCAATTGCAGTTCAAGTCAATCTTGATGAATCTCTTACCCGAAACACTAAGTCACCCCCTATCTCTGTTCCCATCTACATTCCTAGCACATCAAAAGAGATTGGTTTATCGACCTCATCCCCTACTCCTTTGGTAATCCTACCTGAAATGAGGAGCACTGAATGCTCAACACAGACAGACAATAGTGATGCAAATGAAAAAGGTCATGGTGTATCTGTTGAGTCATCAGCCAATCAAAAACAAACCCACGCAACATCAGAAGGTCATATGTTTTACATTCCTCTTCGTCCTACTCCTATGGTGAATCAGACGGCAATCATAGGGTCACAAACCACATCCATATCATCCAACCAGCTCATTCGTGGGGTCACTGTGAAATTAGGAACTGAAGGACCCACTGGCCCTAATCAGCGCGTGATTATGCATGCTGAATTGGTTACAGATCCACCTCAGTTTGCTCCCACCATACATTGCcaagctggaactctcacggcTGGTGGGACTGCATTTTCATCAGAACTTCCTGAAGTGAAAGGTGCTACATTTGTTGCTGGGACCTCCAGgCCTACTGTTCAGCATATTCATCCTGCTGTTGTTAGCCTTCCATCTGACCAAAAGCATATATGTCATTCTTCACTTCTACCGATCTCAGTCGTAAGTCCAGCTTCACAACCATTATTGGTGCAGCAACAATCACCACTACCTCGTCCATCTGTGCCCCCTCCTGTTGGCACTGTACAGCCCACCACAAGGCCACGACCAGTTGTGTCAGTTGATGGCAATGCAGGCAAAGGCCCTACATTGTGTGTAACTTCAACTCAGACAGACAATGAAAAAGTGGATCCTGTTTGGCCAAGTCCCACTCCTGTGACAGAACAAGCAAAACCACCGAAAGCTACTTCAAAATCCAAGGAGAGCATTGATCATTCAGCACCTGGGCCCTCTGGGTCTAAAGCCTCCACCTCCACAAAGTCTAAAGCCAAAGAAAGATCCCAACCTAAAGCAAAGGGAAGAGCATCTTTATCAGCTTCCTGTGAAGCTGACGGATCAGTTCTGGGTGGATCATCATCATCTGTCCCTCTCACCAACCATCCGAATCCCATCGCCACTTTCCCTAATTCTGGAAGTTCTCCACGCATGGTTGAAGCTCCAACATTTTATCCCACTGAAAAAGAATTCCAAGATCCTATGGAATTCATTGAGCGTATTAGGCCATTAGCTGAGAAATTTGGGCTCTGCCGAGTAGTTCCTCCAACAAATTTCAAGCCTGATTGCCAAGTAAGTGATGACATGAGATTCACTGCCTATAATCAATATGTGCACAAAATGCTACATAGGTGGGGACCAAATGTAAAGGAAATGATGGTGATTAAGAAATATTTGAGGACCCAAAGTATTTCTTTCACTCATCCTCCATGGATTGGTGGCATGGAAATAGATTTGCCTCGACTTTATCAAACAGTTCAAAGTTTTGGTGGACTTAAAGAGgtcattgaaaagaaaaagtgGCAAAGAGTGGCTGATGGCATGCGAATCCCTAATTACTCAGCTTCTATGTTTCACGACCCAACACAGTGGGGGTCAGGCCTTTCCTTTGAATTCTGGGAGCAGGTACCTGGACCCTTCGTCGTATTAGCGCCCTCTTTGCAGCAAGAGTAA
Protein Sequence
MELIGKKWTTPEEDTGEDDLVALVDFPDVRKFNKSGKTENENKTKTSSESSKKEVTPLKEKNRPTPKMEAPSRRVSDTSKEIINDDKGKKSVKDKAEPSKSNISKEKKHTLSHKERILREKMRRNAGKVICNKTAHSKCITGGAAGKRVILKAKPQIRQVQTRNRTLRSDSSDDVSKKQPISGKVVVADDSEDKLKTNRMTRQSIKGSDEAKVSIAPKIAVENKSEPKAKSSDGVNSPVHPPRPLRKSVTRTDAINLQQTSSQSEDKFSDSDEEPLGRKVIKNLRQSGGSGKSLPDSKESSEKSKLIDLKSEDKSKDISKKAEEKLKDPVKKKDEKPKDLNRKVADKTKDAKKVIDKPKDVLKKGDGKIVDDGKMSDNKNKEVNVKSDNKDKDIGKKANDKSKEVPKKNSEKKKSITKKVDETSKEVNVKKSDDKPKETHKRASLIAKRAETVDNEIHEISTRARSLKISTTDADSPKASKSLAAESEKPVKPPALKDEDPPKDSKDTETPRSTVQKKSEPSSTGDDAQKRITRNEKMFKTLDQSPKAEEKPLKKKTVVEGGNVSSPKGSSIVKSKTKEVSASEVSKDAIINIPKPDGKRPLESSEKAIGQSESKKFKGSSATDTSKASSALMSKPSEPLHLPEKAPSKSPIVEKFSAVGSKVDEALQSMKKDATCSLISDTEVPVELAKVETGAKKKQTSGTHQPKKEPTKHPPPKKSSAALDPSVKYREPVEIRCDKMCEKSKLFSIEKQAHGGLVLVKKVPSMESIEKVSPLSNAPESKSQDSSSADVESKRSDVIATGSFSSITIPKVPHIPLPGVFTCSCKSWVTIPGKLASASCSSCPIHGEGTSLSEMAVSEEQKAKDVDSPSKDSKKGVDEVANAESVHNTSVFGTDVDSFNDIECADNEVRRKVSKTVEEIEKWLLVSDSINSGKNSEDKNHEDNDLQANKIEFDNIRESMLTDIKAVRVDGEDKGKDSKTVVSSQISSTLESVEKGTGIPLQTFYNRGMHKGLPKIPDPYASRTHKFKEDKSAGFSNSINLVSKLVQKRDTIQLKDDKASVKQKVEAGISSENISPLKGDKASVKQKSDIGGSPGSLIPLKGDKASIKQKVDTGGSSENTIPLKGDKAAIKPKVESGGSSENVLPLKGDKVSIKQKVEAGSSSENITPLKSEKVSIKSKVDASCSFERTLKSGETLTEAEDGMVKESPAGIPSQSSKTSSPPAKVKIETKRSPTKSKIGGMVTGVKKTSSLRNFRMKHDVKMKTVKEEALVLAPSTSKTPSPIAASPVKGTFQAAKSPVNEASQISLLNSSSSSDDIALSVIKSEAIKSQRASDHGVITSTPEKKPIILKGGNNFTVRKSKECLIRRTPSVGAFSPENESSVYAFETEDREATPISTPFRRKTKDGGTNTSPDKLHHRHSSSSSESSSFMCSEVGSPVAKSFSSGITHISKSVTPDSPPSGGGMDNAVKNSTCTTSIAVQVNLDESLTRNTKSPPISVPIYIPSTSKEIGLSTSSPTPLVILPEMRSTECSTQTDNSDANEKGHGVSVESSANQKQTHATSEGHMFYIPLRPTPMVNQTAIIGSQTTSISSNQLIRGVTVKLGTEGPTGPNQRVIMHAELVTDPPQFAPTIHCQAGTLTAGGTAFSSELPEVKGATFVAGTSRPTVQHIHPAVVSLPSDQKHICHSSLLPISVVSPASQPLLVQQQSPLPRPSVPPPVGTVQPTTRPRPVVSVDGNAGKGPTLCVTSTQTDNEKVDPVWPSPTPVTEQAKPPKATSKSKESIDHSAPGPSGSKASTSTKSKAKERSQPKAKGRASLSASCEADGSVLGGSSSSVPLTNHPNPIATFPNSGSSPRMVEAPTFYPTEKEFQDPMEFIERIRPLAEKFGLCRVVPPTNFKPDCQVSDDMRFTAYNQYVHKMLHRWGPNVKEMMVIKKYLRTQSISFTHPPWIGGMEIDLPRLYQTVQSFGGLKEVIEKKKWQRVADGMRIPNYSASMFHDPTQWGSGLSFEFWEQVPGPFVVLAPSLQQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-