Cruf012773.1
Basic Information
- Insect
- Cerceris ruficornis
- Gene Symbol
- -
- Assembly
- GCA_963989415.1
- Location
- OZ022518.1:31171727-31176892[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.089 16 7.4 5.9 1 23 227 250 227 250 0.94 2 20 0.0084 1.5 10.6 4.7 1 23 554 577 554 577 0.92 3 20 1.2 2.1e+02 3.8 0.4 5 23 584 603 583 603 0.94 4 20 0.0093 1.6 10.5 5.7 2 23 610 631 609 631 0.97 5 20 0.065 11 7.8 1.8 1 20 658 677 658 679 0.89 6 20 5.6e-05 0.0099 17.5 0.2 1 22 778 799 778 799 0.96 7 20 0.00015 0.027 16.1 5.1 2 23 807 829 806 829 0.91 8 20 8.4 1.5e+03 1.2 3.7 1 20 840 859 840 863 0.89 9 20 0.69 1.2e+02 4.6 0.1 2 19 895 912 894 915 0.89 10 20 0.11 19 7.1 4.3 1 23 922 945 922 945 0.93 11 20 0.056 9.9 8.0 6.7 1 23 956 979 956 979 0.94 12 20 0.0012 0.22 13.2 0.1 1 20 1016 1035 1016 1037 0.94 13 20 0.023 4.1 9.2 4.7 1 23 1044 1067 1044 1067 0.95 14 20 0.21 37 6.2 0.1 3 19 1133 1149 1131 1152 0.91 15 20 0.035 6.2 8.7 3.4 1 23 1159 1181 1159 1181 0.97 16 20 0.04 7.1 8.5 4.9 1 23 1191 1214 1191 1214 0.93 17 20 0.0026 0.45 12.2 0.4 2 21 1273 1292 1272 1293 0.93 18 20 0.0016 0.29 12.9 3.2 1 23 1300 1322 1300 1322 0.98 19 20 0.22 38 6.2 2.8 1 20 1333 1352 1333 1356 0.83 20 20 0.0012 0.21 13.3 0.6 2 23 1532 1554 1531 1554 0.96
Sequence Information
- Coding Sequence
- ATGAAGATTAAGGTAGAGCCGCCCGAACTCGACGGTGAAAACCCCACCGAGCAATCAGCTGCAAACTGCACAAAGTCAGACGATGATTCCGACAAGTTACATGATGACGAAAAGAACGAAAATACTTCAGCAAACGTTCCGAGTACAGAAAGTACAATCCCGTCCGATCACGACGCGGAAGAACGCACAGCCGTAACTTCTGAAAGTCAACACTTACCGATGGAAACACCAACGTTGGAAAGCAGCCCTCCAGCAAGAAAACGAAAAAGATGGAAACCCTCTTGGTGCGAAAACTCCAAAGACCAATATCGACTGCGTAGAAAAACAGCGGAAAGTAACGGCAGCTTTTTAGATTATATCCCTCACCTTCTGCCAGAAAGGATTTTCATAGCTGATCGCAAAACTGTGGTACTTCGCAGAAAGCGTATATTGCAAGAATCAAAGGATACGCAATTAAAAGATGAGCGCTTGATGAAACTGGATCTCTACGCTTGCAGCGTTTGCTTCGTACTCTTCGACTCCCTTAAGCTGTTGGACTTTCATATTCATAAATATGTAACGGGCCACTGGTACACTTGTCGATGTTGCTCTTCACGGTTTTTCTGGATCAACGAGTACAGGAAACATGTGAAAGTATGCAGTCGCACCGAATACCTCAGGTCCATTGGCTGTGTCAAGTACACCTGCCATTTCTGCAGTGCGAATTTCCGTTTTAAGAACACCTTGCAGTCTCACATCTTTCATGGTCACTATGATGAAATATGTCCGACGGAAAGTAGCAAGCCATCGGACGACGCTGTCGCCGAAGAAGACAGCAGCACCTTGCTTGAACTTGCTAATGCGACTGACGCATCAGAAGCTGGCAGAATGACGCCGAAGAGGTCGAGAAATGATGACGATCCACTGTCTACCCCTGGTAGAAGGATGAGGCAAACTATGCTCACGGAATTTTTGCAGTCGTCTGCCAAGAAACAGAAGATGGATGATGACAGTTCGCAGAGTCCCATGGCCGAGGAAGATTCAACGAAGGACGCCACTGATAACGTGGAAAATGCAACGATATCTTCGAACGGTGAAGCAGCCGGTTCTGCGATGGCTAACGAAAGTCAGAAGCCGTTTGTTCAAATTCACATTAATTCCGAGGTAATGTCGTTCCTCTTGACTTCCACGGCTGTTGTAAAAACCGAAGAGCCAGAGGACCGTCCTTCCACCGATGCGCAGGATACTTCGCGCAATATCACGTGCACCAAATCCGTAGAGGAATCCTTGCCCAATGGCGAGGAACAcaagaaaaaggaggaaagtATCGTTAAAACTCCGAAGTCTCGTAAAAGGCGTACGAAGCCTTCGTCGAATAATCTGAAGAATATGttgaattgcaaattattttccaTTCCGTTGATACGTTGCGATTACATGCTGAAGGACAAGTCAAAAACGAGACGCAGTAGCCTGTCCTCGCAGGTGTCATCTATGAGCAGCGTCTTCAGTGACCTTCAGGAAGATAATAAACACAGTTTGGAATTGAAGAACTTGGAAGTACCGTTGATCAGATTGGACACGTGCGAAGATTTGCCAGTTAAAGAGACCGAGGTCCAAGTGTCGGTTAAGAACGAAGCGATACCCGACACAACGTTTGAACGCGGTGACTTTAAGGCCTTCCTGTGTAAGGTGTGCAAGAAGTCGTTCCACCTGAAGGAGAACCTGCACGAGCACATGGAACTCTTTCACGTTGCTTACATGTCGAGCATATGCAAAGCTCGTTACACGTCCAGAACTAAACTACTGGAGCACTATTTACGCCAGCATATGATATTCGACCGAAGCAAGTGTTGCATTTGCCACAAGAAGTTTGACAAACGAGCACGCTTGAAGCGCCACCTGGCCGTGCATTGCATCAAGATCGTGCGTTCGCAGAGGGACAAATTTCCGATCAACGTCGACGTGAAATGCAAcagttttcgaaaattacacaaGTGCAAGGAATGCGGCAAGAAATTCTGGCTTGCCACGTGTTTGAAGCAGCATCTTGCCTTATGCCGGAAGAGGAAACGTTCAACAGTTGTCGAGGAGCCGGATGAGACGAAGCCGCGGGCAATTTCTACCTCTTCTCCGAAGAAACAACTTATCCAAACGTCCGTGTCACCCAGCCGCGATCAAACGAGTACCGGCGACCTGAAGAGGGAACGTTTGAACCAGTCGTTGGCAAATACCTCGACAAGTACCGATTTATCTTCCAAACTTTCCCAGTACGAGCCACAAACTCCAACGAGCCATAGACCACTGAAGGATGCAGCAGACGCCGATGCACGAGGAGTAGAAAAATGGATATACCCGTGCAACGTTTGCGGCAAGCAATTTCAAACGTTGGCAAACTTGTACTCTCATCAGCGCTCTTTCGCCAAACCCGCGAACAAACGTTGCAACATATGCGGCACTTGTTTCACTACCAAGCGCCATCTACAGACGCACGTGACCGCAACACATGCATTATCCGCCATGCCGGAGCAGTACAAGTTCCGATGCAGATTCTGCAATCAGGGATTCATGAAGAAGGGCAGCCAACGACAACACGAGGGGCACTTTCACTCTCACGACCAACCGATCCATCCCATCCAATCCATCCAACCCGCCGTTGTTTCCAGCCTGCTGAACTCTGAACAGCTATGGAACGTGAACACGGTCTGCACGATCTGTAATCTCATGTTCGAGAGCTACGACCGTTTCATCGAGCACAACATGTACTACTACAAGGGTCAGATCTTCACGTGTACCTTCTGCGGGCAGACTTTCCATGGGATGTACATGTTGAACCATCACAACAAACTGGCCCACTATCCCGCGGAGACGCTCAAGTCGTACACGTACACGTGCGACCTCTGCAACGAGGGTTTCAATCACGAATCGCATTTTCACGCTCATAAGCTTCACGTGCACCTGAACGATGCTACTGTGACGCAGACAGCTCTTAGAAACAGAGAGGGTGAGAAATATCCTTTAGTGACTCCACCTTCAGTGGAGACTAAACAGTTACCTATCAACGCGTTCACCTGTACCGTCTGCGATTTGAACTTCACGAACGCCAAGGATCTCAGCATTCACAAGATGGAGTACTCGAGCGACGGGGAATTCCAGTGCGACAAGTGCGAGAGGAAGTGCAGCACGTACACTGTACTGAAGAAACATCAGAGCCTGAATCATACCGATGGCGATATCCATAGAAGCTACAAGTGTCGCTTCTGCGGAGAGGTGATGACAACGAACGTATCGATGATGTGTCATGAGAAGCACTTTCACATGAACGATGCCATGCAACGGGACTATTTGGAAACACTGAGGGACAACGCAACGAGGCAAGACGTTGCCGAGAACAACGTCAATGATGATAATCTTGCCTGTTTGACCTGTGGCATGAGGTTCAAGGATGAGATGGGTTTGAAGTATCATTTCCTGGAGTATTCTGATATAGGAGAACATGTCTGTACGGTCTGCCACAGAAGATTCGCGGAGTCGCAACGTTTAGAGATTCACAAGCTGAAGCACTCACGACTGAACAACATTCTGTCCGGTCATCGTTGTCCGATTTGCCACGAGGGATTCACGTCGGTCACGCATGTCAGGACACACGTGTTACATTTGCACGGACATGAAACCTTCCCTAACGTCTTCGTTAAGCGGGCTAATAACAGCAACGATGCTCTGGTCCGTCAGCCTGAAGTGCAACGTTTGCTCGAGAACGCCAAAGAATCCTCGTCGACGTTGTTGCCTGGGGCGGATAATTCGAAAGTATTCTCAACCGATCGATTTACCGGGACCAAGTGTCTTGTTTGCAATTTGACGTTCAGCGACAGGAAGAAGCTTGCCAGGCACGTGCTGCGATACGTAAACAGCGGGAGCTACATCTGCGAGGTCTGTGGTCGTAGATTTACCTGGAAGACTGCGTTCAAACAGCATCATCGTAAGCACATGTCTTCCGGTGAAAGGTGTGCCATGAAGCACAGGTGTCCTCATTGCTCCGAGAGGTTTCGCACTGCTATTGCAGCACATTCGCATGTTGTTCACGTCCACAACAAAGACAAGACAGTGGATGAAGCGAAGGACTTGGAGAAGCTGATGGAAGAAGCTGGTTTAACGGATGCGACGAACAGGTTAGTCGAGAGTCACACGGAGAAAGCGATATCCGACGATGAATCCGAATTGGATGACGTCCTGCCCGGCGATGTGATCGAAGAGACGACAGGTTCTAGACAGAGACGTTATTCGATCGAGTCTTCGAGTAGTTCTTCGAAGACTGACGACAATGAAGTTAGTATCGTGGAACAATCTCCGGACATCATTCAAGACATCACCGTTACGTCGCACAAATCATCGGAAGTCTCCAAACCGGTAGAGCCCTCTGTCGCGGTGCCAAGTAGTTCTCGTCAAGCTGAATCCTCGAGACGATCGGAAAAACGATCATTCTCTTACATCTGCCCCATTTGCGTAACAGGAGTCTCCTGTTTGACTGAATTCAAGCTGCATTTGATACAAAATCACGGAACGTCGGCGAGAAAGTCGAAGGCTAAACAGAGCACCGTTCAGCCGGACGTCATTAGGTGTATGTTTTGCGAATCTTCCTTTACGTATGAGTCAAACTTCAAGGCGCACATGGACACGGTGCACATGCCACGCGTACGGAAGTCCACGACTTTCTTGCAATTGGCTGCTGACGGGAATACCACGCCAGCGTCTACCACGGTATCGAAGCCAACACCTGAAGATGGCGACGCTATCGAAATCCTATGGGAGAAGAAGGACGATGATCTTGAAGTAATCGAGATCGACTCTTCGCAGGAAGGTACTTCAGCTCCGCCAGCACAACAGCCGCCTGCCACGCATTCTCAGTCTACCTTGAGCGAGAAGAAGGACCGAGATTCGACATCAGAATCTGACCATGTGGGCAAACTGAAGGTGAAGTCGTTTGCAAACATCGTCGAGAATCTCGCGCAAGGAAGCAAGCCTGTTGTGTCTCCTCCGTGGAAGCAACGAAGTCCGAAGATAACGACTGTTACGGTGCTGAACGACAAAGATAAGATAGATAATATCATGTTGAAAGATAGAATAAGGAGTATCGACTCCAGGCATCAGGCATACCTGCAGACGTTTCTCAACAATATCAAACAGTAA
- Protein Sequence
- MKIKVEPPELDGENPTEQSAANCTKSDDDSDKLHDDEKNENTSANVPSTESTIPSDHDAEERTAVTSESQHLPMETPTLESSPPARKRKRWKPSWCENSKDQYRLRRKTAESNGSFLDYIPHLLPERIFIADRKTVVLRRKRILQESKDTQLKDERLMKLDLYACSVCFVLFDSLKLLDFHIHKYVTGHWYTCRCCSSRFFWINEYRKHVKVCSRTEYLRSIGCVKYTCHFCSANFRFKNTLQSHIFHGHYDEICPTESSKPSDDAVAEEDSSTLLELANATDASEAGRMTPKRSRNDDDPLSTPGRRMRQTMLTEFLQSSAKKQKMDDDSSQSPMAEEDSTKDATDNVENATISSNGEAAGSAMANESQKPFVQIHINSEVMSFLLTSTAVVKTEEPEDRPSTDAQDTSRNITCTKSVEESLPNGEEHKKKEESIVKTPKSRKRRTKPSSNNLKNMLNCKLFSIPLIRCDYMLKDKSKTRRSSLSSQVSSMSSVFSDLQEDNKHSLELKNLEVPLIRLDTCEDLPVKETEVQVSVKNEAIPDTTFERGDFKAFLCKVCKKSFHLKENLHEHMELFHVAYMSSICKARYTSRTKLLEHYLRQHMIFDRSKCCICHKKFDKRARLKRHLAVHCIKIVRSQRDKFPINVDVKCNSFRKLHKCKECGKKFWLATCLKQHLALCRKRKRSTVVEEPDETKPRAISTSSPKKQLIQTSVSPSRDQTSTGDLKRERLNQSLANTSTSTDLSSKLSQYEPQTPTSHRPLKDAADADARGVEKWIYPCNVCGKQFQTLANLYSHQRSFAKPANKRCNICGTCFTTKRHLQTHVTATHALSAMPEQYKFRCRFCNQGFMKKGSQRQHEGHFHSHDQPIHPIQSIQPAVVSSLLNSEQLWNVNTVCTICNLMFESYDRFIEHNMYYYKGQIFTCTFCGQTFHGMYMLNHHNKLAHYPAETLKSYTYTCDLCNEGFNHESHFHAHKLHVHLNDATVTQTALRNREGEKYPLVTPPSVETKQLPINAFTCTVCDLNFTNAKDLSIHKMEYSSDGEFQCDKCERKCSTYTVLKKHQSLNHTDGDIHRSYKCRFCGEVMTTNVSMMCHEKHFHMNDAMQRDYLETLRDNATRQDVAENNVNDDNLACLTCGMRFKDEMGLKYHFLEYSDIGEHVCTVCHRRFAESQRLEIHKLKHSRLNNILSGHRCPICHEGFTSVTHVRTHVLHLHGHETFPNVFVKRANNSNDALVRQPEVQRLLENAKESSSTLLPGADNSKVFSTDRFTGTKCLVCNLTFSDRKKLARHVLRYVNSGSYICEVCGRRFTWKTAFKQHHRKHMSSGERCAMKHRCPHCSERFRTAIAAHSHVVHVHNKDKTVDEAKDLEKLMEEAGLTDATNRLVESHTEKAISDDESELDDVLPGDVIEETTGSRQRRYSIESSSSSSKTDDNEVSIVEQSPDIIQDITVTSHKSSEVSKPVEPSVAVPSSSRQAESSRRSEKRSFSYICPICVTGVSCLTEFKLHLIQNHGTSARKSKAKQSTVQPDVIRCMFCESSFTYESNFKAHMDTVHMPRVRKSTTFLQLAADGNTTPASTTVSKPTPEDGDAIEILWEKKDDDLEVIEIDSSQEGTSAPPAQQPPATHSQSTLSEKKDRDSTSESDHVGKLKVKSFANIVENLAQGSKPVVSPPWKQRSPKITTVTVLNDKDKIDNIMLKDRIRSIDSRHQAYLQTFLNNIKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -