Basic Information

Insect: Cerceris ruficornis
Gene Symbol: -
Assembly: GCA_963989415.1
Location: OZ022521.1:25725245-25728643[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00046 0.081 14.6 1.2 1 23 102 125 102 125 0.94

2 13 0.01 1.8 10.3 4.6 2 23 251 273 251 273 0.91

3 13 0.00076 0.13 13.9 1.1 2 23 319 341 318 341 0.95

4 13 5.8 1e+03 1.7 7.6 3 23 425 446 424 446 0.95

5 13 0.74 1.3e+02 4.5 1.2 1 23 495 518 495 518 0.93

6 13 0.0003 0.053 15.2 1.4 2 23 567 589 566 589 0.96

7 13 0.00031 0.054 15.1 0.2 3 23 613 634 612 634 0.93

8 13 0.0075 1.3 10.8 3.6 2 23 678 700 677 700 0.96

9 13 0.1 18 7.2 4.2 3 23 715 736 713 736 0.92

10 13 0.00026 0.045 15.4 0.1 2 23 781 803 781 803 0.94

11 13 0.047 8.3 8.3 1.6 1 23 882 904 882 904 0.98

12 13 0.012 2.2 10.1 1.7 2 23 918 940 917 940 0.96

13 13 0.0048 0.85 11.4 0.8 1 23 1014 1037 1014 1037 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00046	0.081	14.6	1.2	1	23	102	125	102	125	0.94
2	13	0.01	1.8	10.3	4.6	2	23	251	273	251	273	0.91
3	13	0.00076	0.13	13.9	1.1	2	23	319	341	318	341	0.95
4	13	5.8	1e+03	1.7	7.6	3	23	425	446	424	446	0.95
5	13	0.74	1.3e+02	4.5	1.2	1	23	495	518	495	518	0.93
6	13	0.0003	0.053	15.2	1.4	2	23	567	589	566	589	0.96
7	13	0.00031	0.054	15.1	0.2	3	23	613	634	612	634	0.93
8	13	0.0075	1.3	10.8	3.6	2	23	678	700	677	700	0.96
9	13	0.1	18	7.2	4.2	3	23	715	736	713	736	0.92
10	13	0.00026	0.045	15.4	0.1	2	23	781	803	781	803	0.94
11	13	0.047	8.3	8.3	1.6	1	23	882	904	882	904	0.98
12	13	0.012	2.2	10.1	1.7	2	23	918	940	917	940	0.96
13	13	0.0048	0.85	11.4	0.8	1	23	1014	1037	1014	1037	0.98

Sequence Information

Coding Sequence: ATGTCCTCGACGATGGCGCACGAAACGACAATATCGGAGCTGACGGAACTCGACAGCGACGGTTCGAGTTGCGGTGAGCATCGCGACACCGGAAAGCGCATCCGCGGCGACGCGGATTCGACGGGGCCGAAGAAGAGGCGGAAACAAACGACACCGGTAAGATTTCCGTCTAACCTGATGACGGGAGCGCAGGATGAATCGAACGAGGAGgatgacgaggacgaggacAGCGAAGGTAAGCTGTCGTCGCGATCGCCATTACCGAGTCAGGCGTCGATCAAAGACGAGAACCTCAATAACGAGTTCCGTTGCCAGTATTGTAGTCAGTTTTTCGATAGCAAGGAAACTCTCAACGTTCATCTCGATAACGAGCACGGTTCCATGAATCAACTGTCGCGACCGCTAGAAACCGGATCGCCAAATACCGCGATAAAATTGGAACCGTCTCAACAGCTGGACCAAACCGAGAATCCCGTTAACCTCCTTAGCGTAAAGAATTTCGCGACTTCGTGGCTAGCTACCGGGCAACACGTGCAATCGCATGCGCAGATACAATCTCAAACCGATGAATCGTGGCCGGGACCAGCGACTCAGGTCACCGCGATGTCCAATCATCTCCAGGCTCTTTCCGGTTTCCCAACCGCCCTCGCGCAGTATCTACCTCTCCCTGGTTTTCCCCTCGCGGATTCCAGTCATATCGTCCGACCGTCCTTGGGACCTACCCCGGTAAGAATCTTCAATCCGGACGCATATTGCGACCTCTGTAACAAGGAGTTCTGTAACAAGTACTTTCTCAAGACCCACAAAGCGAACAAGCACGGGATCTACGTGGATTCTCCGGGCCCGAGTCTGGTGGAGAACAACGCGATGCCACCTGCGCCACTTTATTCCGGAAGTTTCTCCGGCAACGTCGTCAAGCTTGAACCACCGGCTACACCACCGACACCCAGTGTACCTTGCGATCTGTGTCAGAAGCGCTTCAAGAACGAGGAATCCGTGCGGAAGCACAAGCAGAAGATGCACAACGAGCTACTGGATCATAACGATCAACAGATCGGTCTTTCGCAGAGCGAGGAGGACAGAGAAACACCGAGAAACAGTCCGGGAGGTATGGAGGCACTTTTCAAGCAAGAATACGGAGTTGAACAGGAAGACGCGACATTTATGCCGGCACCGAGACACCTGTCTCCTCAGTCGATGCAACAGGCGAGGGATTCCGGGTTCAATGCCGATCGTCTACGTCGTTTGGGCGTGATAAATCCCGAGGCATTCTGCGAGATATGTTGCAAGGAATACTGCAACAAGTACTTCCTACGAACGCACAAGATGAAGAGACACGGAATCGTCGTTCAGGACAACGAAAAGTCACCGAGCAATCCTGGATCGGCAGCGACTTGGCATCAAGTGCAAACCAGCCCGTTGAATTTAATCGTCGCGGAGAACAACGCCGGCTCGGAGTCCAACGATCGCACGGGAGACGATTACGAGTGTAAGCCTTGCGGAATAAGATTTCAAACGATCGGCTTGTATCAGGCGCACTGCAGGAAGATGCACGAAAGCGACGAGCAACGATCGCCGAAGCAAGACTACGAGCTCGAGCCGTCTTCGGATCAACGGAGCGACTCCATCTCGGAGGATCTTCAGAAGTTGCAGACCATGATTTTACAACTGAACGGCTTGGAATCGGGGAAACCGCTGTCATGCACCGTTTGCGGCAAAGAGTGCGAGACTAGAGCGACCTTGCACGTTCACATGGCCACGGAACATGGCACCGTAAACGACGAATCGGTACCGTCGCCCCAGGAAAAGTCACCGCCGAACAATACATCCGGTTTTTGCACTTTGTGCGAGAAGGAGTATCCTAATCAGGATTCCCTTCGACGACACATCGCAGAGGATCATCAACCTACGGTTTCCAGTAGCATTCCACTTCCTCATGTTCCCTCTGCTCCGATTACAACCAGCAATTCCACCACTACCAATCAAACCTCGTCCGAGAGGAAGGTGACCTCTATGACCCCGACCTCGAGCTACTGCGAGATATGCAACAAGGAGCTGTGCAATAAGTACTTCATGAAGACTCACATGCAACGGATGCACGGCATTGAAATCGAGAATGGCGCGCAGATCGGCGGTGTTATATGCAACATTTGCAACAAGGAGCTGTGCAGCAAGTACTTCTTGCGCGTGCACAAGCACAATACTCATGGAATCGTCGACGAGAATGCTCCAGGATCTGCGAAACAGGAGAGCTACGACACAGCGAGTTCGGAGGACTCGGCATTGAAGCCGGAACAATTGGGAGACCTGAGCCACAGATATTTCACTCATTTCACCGAGGTTTGTCCCATCTGCAGCCGAAGGTTCCGCAGTATAAAGTGGCTGAAGGCCCATCTGATGGGGGACCATGGAAAAACAGGTATCGACAAGTGGCGCGAGATGGAACAGCAGTATCAAGCTAGCTCGAGATCCGGGAACAGAGGAGTAAGCGGTACGAAGAATACTCAACAGAGCACGAATCTCAAGATACCGAATGGATTCGAGATGTCGCAGCCGATGAAATCAGCCGATTACGCCGGTCTGGGGAACCAAGTGCTCTCGAATCTTCTCGGATCATCGTCCGAGGATCAACAGCTGAAGAACTATCGTTGCTCCTACTGCAACTTCACAACCACCGTGCTgccgtttctctttctccacgAGCGATCTCACGTGAACTCTCAGGAGAACCTGGAGAGCGAGAAATCACTCCAATGTCCCATCTGCTCCCAGTCTTTCCATCAGCCGGAGATCCTACATCAGCACTTGCTCACGAGACATCAATTTCCCGCTCTCCTCTCACACTTTCAACCCCCCGTTCTCGGCGGTCTGAGGCTCGACGCAGACAAACCCAACGAATCCAAGGACCGAATCGACCAAGAGAATAAAGACGAACGCGTTGGTACCAGTCCCCAAGTCACTGCCAATCAGAACATCCCCGAAGCCATGAGAAACCAACGCCAAGACGACACCGCCGTCCAAGTGACACCACAGGGCGTCTACAAGTGCGCCCAATGCGGCTACGCTACAACGAATCTCAACAGGATCAAGCGACACGTGAGGAAAGATCACAAAACGATCGGCGATCCTACGGACAGCGTGATCGCCGAGCTCAGCAAGAGCCTCAAGGACGTTGCGAACAAGCACAAAATGCCAGCCTGCTACGCCATGCCTCAGGACATGAATTCGAACCCTGACAAGACGATAATGCAGCCGTTTCTCATCGAGGAGCGGGAAATGATGCAAGCAGGCGAAGAATCGAGCTCCGAGAGGAGATTCGCCCCGGCGTTGGTTTATTTGCCGGTGAAGTCACGGATCAACAATGCTCTAACTGCCTCATTCACCCTAAGTCCCGCTTGA
Protein Sequence: MSSTMAHETTISELTELDSDGSSCGEHRDTGKRIRGDADSTGPKKRRKQTTPVRFPSNLMTGAQDESNEEDDEDEDSEGKLSSRSPLPSQASIKDENLNNEFRCQYCSQFFDSKETLNVHLDNEHGSMNQLSRPLETGSPNTAIKLEPSQQLDQTENPVNLLSVKNFATSWLATGQHVQSHAQIQSQTDESWPGPATQVTAMSNHLQALSGFPTALAQYLPLPGFPLADSSHIVRPSLGPTPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPGPSLVENNAMPPAPLYSGSFSGNVVKLEPPATPPTPSVPCDLCQKRFKNEESVRKHKQKMHNELLDHNDQQIGLSQSEEDRETPRNSPGGMEALFKQEYGVEQEDATFMPAPRHLSPQSMQQARDSGFNADRLRRLGVINPEAFCEICCKEYCNKYFLRTHKMKRHGIVVQDNEKSPSNPGSAATWHQVQTSPLNLIVAENNAGSESNDRTGDDYECKPCGIRFQTIGLYQAHCRKMHESDEQRSPKQDYELEPSSDQRSDSISEDLQKLQTMILQLNGLESGKPLSCTVCGKECETRATLHVHMATEHGTVNDESVPSPQEKSPPNNTSGFCTLCEKEYPNQDSLRRHIAEDHQPTVSSSIPLPHVPSAPITTSNSTTTNQTSSERKVTSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENAPGSAKQESYDTASSEDSALKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLMGDHGKTGIDKWREMEQQYQASSRSGNRGVSGTKNTQQSTNLKIPNGFEMSQPMKSADYAGLGNQVLSNLLGSSSEDQQLKNYRCSYCNFTTTVLPFLFLHERSHVNSQENLESEKSLQCPICSQSFHQPEILHQHLLTRHQFPALLSHFQPPVLGGLRLDADKPNESKDRIDQENKDERVGTSPQVTANQNIPEAMRNQRQDDTAVQVTPQGVYKCAQCGYATTNLNRIKRHVRKDHKTIGDPTDSVIAELSKSLKDVANKHKMPACYAMPQDMNSNPDKTIMQPFLIEEREMMQAGEESSSERRFAPALVYLPVKSRINNALTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -