Basic Information

Insect: Cerceris ruficornis
Gene Symbol: -
Assembly: GCA_963989415.1
Location: OZ022523.1:15637910-15642448[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0044 0.78 11.5 0.2 1 23 226 249 226 249 0.95

2 9 4.5e-06 0.00079 20.9 2.3 1 23 254 276 254 276 0.99

3 9 1.8e-05 0.0032 19.0 3.2 1 23 282 304 282 304 0.97

4 9 0.0067 1.2 10.9 0.5 3 21 312 330 310 333 0.89

5 9 3e-06 0.00053 21.5 1.1 1 23 339 361 339 361 0.97

6 9 7.3e-06 0.0013 20.3 1.1 1 23 367 389 367 389 0.98

7 9 0.00097 0.17 13.6 5.3 1 23 395 417 395 417 0.96

8 9 9.3e-08 1.6e-05 26.2 0.8 1 23 423 445 423 445 0.98

9 9 0.0023 0.4 12.4 1.3 2 23 454 475 453 475 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0044	0.78	11.5	0.2	1	23	226	249	226	249	0.95
2	9	4.5e-06	0.00079	20.9	2.3	1	23	254	276	254	276	0.99
3	9	1.8e-05	0.0032	19.0	3.2	1	23	282	304	282	304	0.97
4	9	0.0067	1.2	10.9	0.5	3	21	312	330	310	333	0.89
5	9	3e-06	0.00053	21.5	1.1	1	23	339	361	339	361	0.97
6	9	7.3e-06	0.0013	20.3	1.1	1	23	367	389	367	389	0.98
7	9	0.00097	0.17	13.6	5.3	1	23	395	417	395	417	0.96
8	9	9.3e-08	1.6e-05	26.2	0.8	1	23	423	445	423	445	0.98
9	9	0.0023	0.4	12.4	1.3	2	23	454	475	453	475	0.96

Sequence Information

Coding Sequence: ATGGAGAATAGGTCGGCGCCGCTGCGTTCCAGGCGAGTCTGTCGATTCTGCCTAACGGAATCCGAACCTCTCAGCTACATTTATGAAAGAGATCACAGCAAGCCGTTTCAAGTGCCGCTTCCTCTGCAGATCATGTCGTGCGTCGCCATCGAGGTGTATGCAGCTGATGGAATGCCACAGATGATATGCAATATGTGTCGCTGGAATCTGGATCGCTCTTATAAATTCAAACTTCAATGCAAGAAAGCGGACGAAGCATTGAGAGCTTACCCATTGTCCGGTGTTTTACCAAGACCTTTTCCTCCGATTCCCAATGATCCTCCTGAACCGAGCAATAAAAGACCTTTAGAACAGAGACCTCAAAATGAAATGGCAAAGAAACCCAGAACCGACAATGGCGATAGAGAAAGGCGAGAAACTAGAGAACGAGATAAAGACagggaaagggaaagagaaCGTGAGAGAGATCGAgatagagaaagggagagggagagggagagggatagagatagggaaagagaaagagacagagatcgGCAAACAGATAAGCAAAGAGAAAAGGGCGATCAACACCATGATTTTTATGAGGAAGTACAAGATGGTGGTAGCGAAGGATATCAAGAAGGAAGTAGCACCAAGGAGGATCGAAAATTAGAACCAGGTGAGATAAGAGTACATGCTTGCGATCAATGCGAGCGCACGTTCCCTCTGCGACAGGCACTCGCTTTGCATATACAGAAAGCTCATCGTGATCGCAATTACAAATGCACTGAATGTGACCGCATGTTCTTCTCCAAATATGATCTTGGTAAACATATGACTACACATTCCGAAGAGAAGCCATTCTGTTGTACGATATGCAATAAACAGTTCTCAAGAGCCAACCTCCTACAACGTCACGAGAAAGTTCACAGGGACGAATTGAGATACGGTTGCCAGCACTGTGATCGTGAATTCTTTACAACCGAGGAGTTGGAAAAGCATGAAGATGCTGtgcataaaaaagaaaaaccttTCCAATGTAATATCTGTGACAAACGTTTCACGTATAAGCAAGGTCTAGAACGCCACGAAATGCTGCACAACGAGGACAAAACGTTCGTTTGCGAATATTGTAAAGAAGCGTTCCGAACCAGCACAAAACTAGCTCGTCACCTGACAACCCATGCTGGTCATCGTCCATACCTATGCAAACTTTGTCCTCGTTCATTCCTTTTGTCCCACCATCTTACTAGGCACATGCGTACACATTCTGTAGAGAAGCGCCACGTTTGCGAAGATTGTGGCAAAGCGTTCAAACGTAAAGAAAGTTTGGAGGTGCATCAGCTGACCCACACAAAGCGCACAGGAATGGGCTTAACTTGCGACGTCTGCCAGGAATCATGCCGGAATAGAGCAGACTACGTCACCCACATAAAGCAGCATATTGAAGCAGGTGAGAAAATGGGACCAGATGGGTTACAGCcagataataaatataaaattgaagtaGATTCTGAGGAAGATGAAGAGGAGGAGCAGTACACGGACGGAGATGACGACTATGAGCCACCAGCGTATATCGTGAAGAAGCTGCCGAAAGTTAACAAACGATCCGAGagcgaggaagaaggagagaggacAGTGAAGGAAGAAAATCGTAAGGAACAAGTCGTATTCGTCAGAGGTAAAGACGGAAATATGGTGAAGAAGACCATTAAAACTTTAATGCCGATTCAACGTAGAGACGTGCAAGACgcgaaaacaaaacaaagcCCGACTAATAATCAAAATCAATCAAATGTAAAATCTTCTCAAGGTAAAGAAACCGAGGAATCAGTGAAGACAACTCGGGTCGACGAGACAGAGGCCCAAGTCCAAAAGATCGTCGCGTCGGTCTTTAAGGAGCACAAGATTCCGTTAAAACATCAGAATGTTGGACAGGATCAAGGTAAAGAATCTCCCACGTCCACGTCTCAGGCTAAGATTCAACAGGCGCAGAATAGCTCTCAAAATCAGATTTCTACGAAAGACATGAAATCGGATACGTCGATGTCCATCGGCGATAAACCGAAAGCTGTTAACgccgttaaagtaataaagaGAATAGTAGTGAGAAAACCTGGTGTAGGTACTGAGACTTCGACGACCACTCCAACCGCTAAGGAAGCCGATACTTCAATCGGCACCCCACAAACTCCCAGCACTGGCCATAAAGTAACGAAACGAGTAATCGTCCGAAGAATCATTAGACAAGGTGACACCACGAGAGAAGTCATCATGAATCCCGACGGCACAATAATAGACCCGGCCGAATTGGCTAAATTACCAACTGGAAATGTCGTTAAGAGAGTGGTCGTGAAGAGGCCTCTTGACAAGCAACAGGGCATCGTGCAAGCCGTGCTACAATCATCGGCAGATCAACGACAGTCATCGTCGTCTATGAAGAGCAATGAGTCCATCCTGGGAGAATCTTCGAAGTTCGAACTTAAAACGTCTCAATCAACGAGCATGACATCGTCAACGCCCAAAACATCAAAGCAAAAATCCTCTCCTGTAACGGGAGATCAAGAGACGAAGGAGAAACTTGAGCAGCTAGAAAAGAGAGTAGAGCAGCAACGCTTGAAAATCGAAGAACTACAGGCACGCAAACAGCAAGAATACGAGCCGATTGACGAGATGTTACCTGAACGTCACGATGAATCCGAGGATGAACAACAACTACCACTCAAGAGGGTGTTCGTCAAGAGAAAACAAAGTATCTACGACGAGGAACAGGAGTACAACGACACCGATGACAAGCCTGTGACTCCACTGAAAGAGGAGAGTCAGTCTGACTCGATTCAAGAGGAGGAGAAGGTAAAACCCGAGAGCGAAACAACACCAGTGGAAAACTTACCAAAAGAAATTCCAACCGTACCGAAAACAACACTTACACCCGTATCTGGAGCCAGAAGAGAAGGCAAGCAGCCGCTGATAACGAGCTCGAAAGTCTACGGAAATAAGAAGATCATCGTGGTGAAAACGGAAGAGACATCGGAAGTAGAGGAAATGAGTCGAGAACTTTGCAGTATACTCGACTCCGCTGAATCCGTGGCGAAGATGCAAGAAAACGTCTTAAGTAATCTCTCTCAAATATCAGCTCTCGGAGAATCCTCTCAAAAGACTTACGTGGAAAAGCCTAAACCGGGACCGTCCGCCATGGAGACCGATTCCATGGAACAGGAATCTACGACGGAAACGATAGATTCCCAGGATCAGGATATACAAATTAAACTCGAAACTTCGATACCAATGGACACCGAGGACACGCAACAGTCTGACGTGAAGAACGAAAACGAGACGACCGAGGAGGCAGTTATAGAGCAACCGGAAACACAGGATTCCAGTTTGACGTTGGACGGACAAGATCTTTCGGAATCGACGGACATCTTCGAGCCATCCGATAATGTTTTGGAAGTTCAGAAAGGTCAAGATCATTTGGGAGACTCGGTAATAGAACTCAGTCATGGAAATCACACGATCAATTTGAACGACACTAACGACAGTCAGGACAGCCTTGAGGACAAGTTGTCGCAGATGGAGGGTTAA
Protein Sequence: MENRSAPLRSRRVCRFCLTESEPLSYIYERDHSKPFQVPLPLQIMSCVAIEVYAADGMPQMICNMCRWNLDRSYKFKLQCKKADEALRAYPLSGVLPRPFPPIPNDPPEPSNKRPLEQRPQNEMAKKPRTDNGDRERRETRERDKDRERERERERDRDRERERERERDRDRERERDRDRQTDKQREKGDQHHDFYEEVQDGGSEGYQEGSSTKEDRKLEPGEIRVHACDQCERTFPLRQALALHIQKAHRDRNYKCTECDRMFFSKYDLGKHMTTHSEEKPFCCTICNKQFSRANLLQRHEKVHRDELRYGCQHCDREFFTTEELEKHEDAVHKKEKPFQCNICDKRFTYKQGLERHEMLHNEDKTFVCEYCKEAFRTSTKLARHLTTHAGHRPYLCKLCPRSFLLSHHLTRHMRTHSVEKRHVCEDCGKAFKRKESLEVHQLTHTKRTGMGLTCDVCQESCRNRADYVTHIKQHIEAGEKMGPDGLQPDNKYKIEVDSEEDEEEEQYTDGDDDYEPPAYIVKKLPKVNKRSESEEEGERTVKEENRKEQVVFVRGKDGNMVKKTIKTLMPIQRRDVQDAKTKQSPTNNQNQSNVKSSQGKETEESVKTTRVDETEAQVQKIVASVFKEHKIPLKHQNVGQDQGKESPTSTSQAKIQQAQNSSQNQISTKDMKSDTSMSIGDKPKAVNAVKVIKRIVVRKPGVGTETSTTTPTAKEADTSIGTPQTPSTGHKVTKRVIVRRIIRQGDTTREVIMNPDGTIIDPAELAKLPTGNVVKRVVVKRPLDKQQGIVQAVLQSSADQRQSSSSMKSNESILGESSKFELKTSQSTSMTSSTPKTSKQKSSPVTGDQETKEKLEQLEKRVEQQRLKIEELQARKQQEYEPIDEMLPERHDESEDEQQLPLKRVFVKRKQSIYDEEQEYNDTDDKPVTPLKEESQSDSIQEEEKVKPESETTPVENLPKEIPTVPKTTLTPVSGARREGKQPLITSSKVYGNKKIIVVKTEETSEVEEMSRELCSILDSAESVAKMQENVLSNLSQISALGESSQKTYVEKPKPGPSAMETDSMEQESTTETIDSQDQDIQIKLETSIPMDTEDTQQSDVKNENETTEEAVIEQPETQDSSLTLDGQDLSESTDIFEPSDNVLEVQKGQDHLGDSVIELSHGNHTINLNDTNDSQDSLEDKLSQMEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -