Cruf032589.1
Basic Information
- Insect
- Cerceris ruficornis
- Gene Symbol
- ZFX
- Assembly
- GCA_963989415.1
- Location
- OZ022526.1:4537379-4541667[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.3 2.3e+02 3.7 0.1 3 23 14 34 13 34 0.94 2 14 0.00086 0.15 13.7 2.8 3 23 990 1011 989 1011 0.98 3 14 0.023 4 9.3 0.1 2 23 1024 1045 1023 1045 0.97 4 14 1.6e-05 0.0028 19.2 3.1 2 23 1048 1069 1047 1069 0.97 5 14 0.013 2.3 10.0 0.3 1 23 1075 1097 1075 1097 0.95 6 14 2.6e-05 0.0045 18.5 4.5 2 23 1104 1125 1103 1126 0.95 7 14 0.34 60 5.6 3.7 5 23 1139 1157 1138 1157 0.97 8 14 2.3e-05 0.0041 18.7 1.5 3 23 1164 1185 1163 1185 0.97 9 14 0.036 6.3 8.6 0.0 2 23 1201 1221 1200 1221 0.96 10 14 7e-05 0.012 17.2 0.7 1 20 1227 1246 1227 1249 0.92 11 14 8.7e-05 0.015 16.9 2.7 1 23 1257 1279 1257 1279 0.99 12 14 0.0024 0.43 12.3 3.2 1 23 1285 1307 1285 1307 0.97 13 14 4.4e-06 0.00077 20.9 3.9 1 23 1313 1335 1313 1335 0.99 14 14 0.0015 0.27 13.0 6.3 1 23 1341 1363 1341 1364 0.96
Sequence Information
- Coding Sequence
- ATGGATCTTGGCAATACAGGAGGTGGAGGTACAATGGCTTGCCCAGTTTGTACTTTATACTTACGTGAGGGTATTAGTCTACAAAGACATTTAGATACTCATCCAAAGGAACAGGTTATAGAGGCTCTTATTAAAGCTAGCACAAATTCTTTACATGTACAAGCTCAGTTACCACCGTCCGGTTCTTCAGTTTCTGCATCTGTACAATCACCACAGAGTACATCTCAGGTTACATCGAATACTCACCTTTCGACTCAATCGCCATATCCAATAGGACCAATTTTTGAGTGTCCACCCATTGGTACTGTAATGCCACCTCAATTTGCTTCTTTCAGTTATCaacaatttgtaaataatgGAACTATGATGATACCCCAATACGCTATGGCCCCGCAAGCTAATCAAATGATGCAAATGCTATACAATCCATATGGCATGTATCAGCAACAGCAGATACCCACTGTGCAAATGATTTCACCAGTGACAGCCATTCCTGGAGCAACTAGAATCAGACCTGTAGGCACTGTGACTGGTGAAACGAATGGCAGGACTGCGATTGCTGTACCTGTAAATAATTCCGAGCCAAAACAAATATTACCTGAAATTTTACCTGAACCAGAAACAGAATCAGAACAAGTGCTGCCAGATATCAACCTTTCAGCATCTCCTTCATCTTTAAATGATGACACTTCGATCAGAGAAGATGAAAGTGAAACTGGTGATGTTCGGATAGAGCATGCAGAGCAACAGACTCATAACACCAGTACCGAAGACCAATGTACTGTACAAAATGAATACAATAATATACCAACGACACTGGCAATTGCTTGTAATGTTGACGATACTGCAGAAGATAAAGTAGAAAGTGTATTACCAGATATTGAAGAAGGAGAGTCGGTACATGCAATTTCTGTAGACATACAATGTAAATCTATTCATTATGAATCAacagaaatacaaaaatacacACATAGATACGAAGATTGTAATGACAAAGTTAATGCGACCGAAGCACCTAGAGTAGaagaaaatgaaagtgaagaacaAGATAGTAAAAAGGTTTCTCACAGTACAGAGACAAATGAAAATTCTGACAGCTCTCCTGAAATATCATTAGTAGATGCAGAAAAGGATGTACCTCAACCTGAAGTGGAACAACTAGAGCGCCTCTTAATCACTATCATGGAATCTGAATTCAATGATTCAGTATCACACAAAGaaacaaattttgaaattgatcagaaaaataatgaagctatgaaacaaaaatatagtacagaaagagaaaagagtGTCATTCATGGAACACTAGTCACTATTTCAAGTTCACACGAGGATAATAAGTCACCTGATGTAGGAGTAACAGTTACTCAAAGGTCACAattttgtgcaaatagtaatcaAGATAATAATTCTTTCCAATCATATCAGTATAAGAATAGTTTATCTGCTCCTGTATCTCCTGTTGCACAAAAGAAATCTCACAGGACTTATTCTGTTCGTTCAGTATTTAGTTCTAGTGAAAATCTTAATACTTATCCAATTGATTTTGATGCTAATACACTACAAGAAGATgaagatgatgatgatgaagatGAAAAAACTGACGCAGGGGTAAATCTTAATGAAGCAGACATGGAAATAGAAGAAATACCTAGTCCTCATACACCTTTCATTAAATATGATGAAAATTCTGATCATATTCGATCGCATACTCCATTATCAGCAAGCAGTGGTATTTCTGTATTACGAGTCAGAAAAGATCTTAGCAAACCATGTTCACCTGCATCAGTGCAATCATTTTCCCATTTAGATGCTAATGGTTTGAGCCATGATGAAGATAGCAATGTTGGAGTAAATACTTTGCCAGAAAAGGATCCTATTGACTGTTCCCAAGTTGAGCAAGATTTAAAGACTGACAGTCAAGAACTTTCAATTTGtgaaaatatgagaaaaaaagaagggaaCACAACGTATCATCAATCTGTAATAACGGAGCATGTTAGCTCATTTCCTACAATTCATTCGCAGCAATCTGCATTGATGCATGAATCATATTCTATTTCAAATAATAAGACCCATAATCTTCTAAATCGTGCTGATTACATTGAAGTCACAAATAATGCTGATTGCAACAATACCCATTCTTCCAAATCTATCGTACAGAAACAATCACTAGAACTTCTTAGCTTAAATGATGATGCTTATACAGGCCCAATGAATGTTTTTGAATGTGATGGGTTTCAAATCTTAGTTCCTAGTACATTTATAAGTGATTCTTCGCAAAAAGCTGTTAGTGCAACCAGTCAGCAATCTATGGCAAGTAGTGAGGGTGGTGCAGGAATCGATGAAGAAGTCAAAAGTGTCAATATGAGAGCTGATGAAACAATGCCTCCTAGAGGTGAATTGTCAGAACAAGAAAGTAATGGATGCACAGAGCAGTCTGCATGGCAGgtTTATATGGGACAAGAATCATCACGTATGTCTACTTCTTATGATTTGATGGCACGCGAAAGTTGGGAAGAATCTGAAGGATCAGATAATGAAATCAGTGGACCATTGCTTGACAGTCGATCTTTGGCTACACATTTTACATCAAGTTTGTTCTTAGATCGTGATAGAAAAACTCCGACGAAACGAATGTTCAAATGTTACCATTGCTCAGAAATATTTGATTGCCCAAAAGAACGCAGAGTGCATAGCACTACTACGCACAAAGAGGCAGGACCGAGTAGCAGTAGAGATCCGACAGACCAACCTGAAGTAAAAGATATTAAGTTATTAGATGGACGGATGAATGTATTTGAGGATATTTTTGTACCAGGGTTGCATGTTCAACAAGTTTACCATCATCAACAACCACTTCTGCATCAACTTCAAACACCACAGTCAGGGGATTTAAGTACTAAAGTTGAGCCCGatcaaaaaatcgaaaatttgtTAATACCATCGACTATTGAGGTACTTTGTACAGTGTGTAATCAACGGTTTAGTAGTGAAAAATCACTGCAATTGCATCACAGAAGAGTACATATTACCGAAACGTCTAAACGAATTCGTGAAAGTACTAAGTGTCAAATATGTAGTGAAGAATTCCCTTCAGTTTTATTATTCAATGCTCATTTAAAAATACATCCCTTAGAATGTAGCCAGTGTGGGAagtatttttatagaaaacagaattttaaattgcatATGAAGCGACATTTAGGAATTAAACCTTTCCCTTGTACCGTTTGTGACAAGGCATTTTTAACCAAGCAAAAATTGGATGAACATACCAATGGTCACACTGGAAATGCACCTGTAAAATGTAATCTTTGTAATGAAACTTTCCGTAGATATTCAAATTTAACCCAGCATAAAAATAGGCATCATCTGAATATAAAGAAGAAACTAAAGGATTACATATGCCATtgtggtgaaatctttcatacAAAGAAAAAGTTGGCTTGGCACAAGGAAACGCATGATGAGAAACCTAAAGCTTGCACGTATtgcaatgaaagatttattcacATGGCCAGCTTGACACGACATATGCGTCGAGCCCATAATAGAAGATTCGTTCCTGATGCtcaaagagagagcgagaatgTCGAGTGTCCCATATGCAAGTCTATTTATTTACGATCTTCCTTAGCAGTGCATATGCGTGTTCATAACGGCGAGAGACCGTACGAATGTCAGGTTTGCTCTAAAGCGTTCAGTACTAAGTGGAATTTACAATTGCACAAATGGACTCATGCTGCTCGTAGCACCAAACCTTTTAAGTGCAATCAGTGCAGTGCCGCATTTTATCGGCACAGTGATTATACTGCTCATATGAATTCTCACCGGAATGTGCGTCCTTACACGTGCAACTATTGTGGAGCGCAATTTATAAGGAAATATAATTGTTTGAGGCATGTTAAGGAACACGAAGAGAATAAATCATACACGTGCGATGTTTGTAATAAAACTTTTCATAGATCATATTATTTGAAGGAACATTTACGCGTTCATTCAGGCGCGAGACCGTACACTTGTCATATTTGTGGCAAATCTAGCGGTACAAAATCAAATCACAACAAACATGTTAGAATTCATCATGCACGGGAACCTGTAAATaccgaaaactaa
- Protein Sequence
- MDLGNTGGGGTMACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASTNSLHVQAQLPPSGSSVSASVQSPQSTSQVTSNTHLSTQSPYPIGPIFECPPIGTVMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPVTAIPGATRIRPVGTVTGETNGRTAIAVPVNNSEPKQILPEILPEPETESEQVLPDINLSASPSSLNDDTSIREDESETGDVRIEHAEQQTHNTSTEDQCTVQNEYNNIPTTLAIACNVDDTAEDKVESVLPDIEEGESVHAISVDIQCKSIHYESTEIQKYTHRYEDCNDKVNATEAPRVEENESEEQDSKKVSHSTETNENSDSSPEISLVDAEKDVPQPEVEQLERLLITIMESEFNDSVSHKETNFEIDQKNNEAMKQKYSTEREKSVIHGTLVTISSSHEDNKSPDVGVTVTQRSQFCANSNQDNNSFQSYQYKNSLSAPVSPVAQKKSHRTYSVRSVFSSSENLNTYPIDFDANTLQEDEDDDDEDEKTDAGVNLNEADMEIEEIPSPHTPFIKYDENSDHIRSHTPLSASSGISVLRVRKDLSKPCSPASVQSFSHLDANGLSHDEDSNVGVNTLPEKDPIDCSQVEQDLKTDSQELSICENMRKKEGNTTYHQSVITEHVSSFPTIHSQQSALMHESYSISNNKTHNLLNRADYIEVTNNADCNNTHSSKSIVQKQSLELLSLNDDAYTGPMNVFECDGFQILVPSTFISDSSQKAVSATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEQSAWQVYMGQESSRMSTSYDLMARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRMFKCYHCSEIFDCPKERRVHSTTTHKEAGPSSSRDPTDQPEVKDIKLLDGRMNVFEDIFVPGLHVQQVYHHQQPLLHQLQTPQSGDLSTKVEPDQKIENLLIPSTIEVLCTVCNQRFSSEKSLQLHHRRVHITETSKRIRESTKCQICSEEFPSVLLFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEIFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKSIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKSYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -