Basic Information

Insect: Cerceris ruficornis
Gene Symbol: gtf3a
Assembly: GCA_963989415.1
Location: OZ022519.1:16613833-16618514[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0012 0.21 13.3 0.1 2 23 742 763 741 763 0.97

2 17 0.6 1.1e+02 4.8 0.7 1 19 769 787 769 789 0.91

3 17 0.64 1.1e+02 4.7 1.6 1 23 795 817 795 817 0.94

4 17 0.00027 0.047 15.3 1.2 3 23 826 847 825 847 0.98

5 17 0.0027 0.48 12.1 2.0 1 23 854 877 854 877 0.95

6 17 9.7e-05 0.017 16.7 0.7 1 23 883 906 883 906 0.94

7 17 1.3 2.3e+02 3.7 2.5 2 23 914 934 914 934 0.94

8 17 6.5e-07 0.00011 23.6 2.3 2 23 940 961 939 961 0.97

9 17 2.3e-06 0.0004 21.8 0.2 1 23 967 989 967 989 0.99

10 17 0.00032 0.056 15.1 2.4 2 23 1001 1023 1000 1023 0.95

11 17 0.0081 1.4 10.7 2.5 1 23 1029 1052 1029 1052 0.96

12 17 0.012 2.2 10.1 3.0 2 23 1074 1096 1073 1096 0.95

13 17 0.0012 0.21 13.3 1.4 2 23 1103 1125 1102 1125 0.96

14 17 3.9e-05 0.0069 18.0 1.0 2 23 1133 1154 1132 1154 0.96

15 17 0.0012 0.22 13.2 2.3 1 23 1160 1183 1160 1183 0.96

16 17 0.33 59 5.6 3.2 2 23 1190 1211 1189 1211 0.96

17 17 0.0097 1.7 10.4 2.6 1 23 1217 1239 1217 1239 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0012	0.21	13.3	0.1	2	23	742	763	741	763	0.97
2	17	0.6	1.1e+02	4.8	0.7	1	19	769	787	769	789	0.91
3	17	0.64	1.1e+02	4.7	1.6	1	23	795	817	795	817	0.94
4	17	0.00027	0.047	15.3	1.2	3	23	826	847	825	847	0.98
5	17	0.0027	0.48	12.1	2.0	1	23	854	877	854	877	0.95
6	17	9.7e-05	0.017	16.7	0.7	1	23	883	906	883	906	0.94
7	17	1.3	2.3e+02	3.7	2.5	2	23	914	934	914	934	0.94
8	17	6.5e-07	0.00011	23.6	2.3	2	23	940	961	939	961	0.97
9	17	2.3e-06	0.0004	21.8	0.2	1	23	967	989	967	989	0.99
10	17	0.00032	0.056	15.1	2.4	2	23	1001	1023	1000	1023	0.95
11	17	0.0081	1.4	10.7	2.5	1	23	1029	1052	1029	1052	0.96
12	17	0.012	2.2	10.1	3.0	2	23	1074	1096	1073	1096	0.95
13	17	0.0012	0.21	13.3	1.4	2	23	1103	1125	1102	1125	0.96
14	17	3.9e-05	0.0069	18.0	1.0	2	23	1133	1154	1132	1154	0.96
15	17	0.0012	0.22	13.2	2.3	1	23	1160	1183	1160	1183	0.96
16	17	0.33	59	5.6	3.2	2	23	1190	1211	1189	1211	0.96
17	17	0.0097	1.7	10.4	2.6	1	23	1217	1239	1217	1239	0.98

Sequence Information

Coding Sequence: ATGCAGAACACTGAAGTTAATAATAGAGATCATAATTATAGTGAAGTAAAATTAGATAATTCTCAATACAGTGAGAGCAATgttcaaaatatatttaacgaTGATAGTTGTACATTGCTATGTAAATCAAACAAGTCGACATCATCAAACAAAGAACCATTCGGCCAAATTAGGGACATAAATGAGTTAAAGAAGATAACACCACGTGTGAAATTATTAGCACATGATGCCAGTAGCTTAAATGAATTAACAAAGATTTCTTTACATAATAAAGTATCTGGGCAGAATAAATTACCTATATCAGAACAGACAAAAgaagaattgaaaaaatattgtagaACTTGCGCTGGTTTGAAACTTCCATTAGTCGATATTTTTAGTGAAAAAGGTGTGCAGATGAGACTGAGCCAACAAATTAAACATCTGGAAGAAATAAATCCTTATGATAGTTTGTCGACTCAAATGTGCATGGACTGTATCTGCGATTTAAAAATGAGCTATAaattttttatgcaaatcaaaaaggcagaagttaaattaaaatcaattcATATTACATTAACTGACACAGCAGCAAAAAGCCTAGAAGCAAGTAGACTGCGGTCTTTAGCAGACTCTGAAGATGCTGAAAAACTGTCTCAAGATGCTTTAGAGTATAATGCTATTTGTGTATCTACAAGTAAAGAGCATGAAGTAGAGGAAGATGTgccaaaaatatctgaaatattttcaataaaaggtGAACCAGAATCTCCTaaagaagtagaaaatattgaTGCTGATTCAGGAAATAAGACTGAACCTgaaatttttgaagaaataGCAATTCAGCAAAACAGCGATGATAATGAATCTATAGAAGAATTTGATCCAGATGACCCACCGTTTCAGCCTGATAGTTCTGATGTTGCAGATTCTGATGATGATATAGATGATGTACAAACACAGAACTTGAAAAAACGAAATACACCGAAAAAGGAAAATATCACAAAGCAAGAGTCTCAGCAGATTTATATTTGTGATAATAACTCTTTTCAGAATAATGAAGATATAGATTTTAATCAAACAGTGTATAAATATGATCTGGCATTAAAAGCTTATGTAAAAGTAGATGACGTTCAAGATGATAATTATAATACTGAATTACAAACCAGTCAGACATCAGAAGTTTACAGTGAAAGTACAAAAGAGTCTTCAAAACAACCAAACATATTAAAGCGTAGACTCTTGTCGCAAACAAAGAAAGAATCTACTGACGAAATCGATGAAAATACCTGTCCATCTAGCATATCTGATAAGAATGAAAGTCAAAAAGAttttaaagtacaaaaattagATGTACATAATCCCTTAAGTATTAATAGCGGCCAGGAGGATGGTATCATGTATGTTACTGTTAAGGGTTCTAAACCAAATGAAATACTGTTAGTAAAGGTTAAAAAGATGGATAAACcattagaaaagaaagaagacaaATTTGTAGGGAAAAAAGGTTTCGATATTAAGCCTATGGAAAAAATTTTGAAACGATATGAGACATTTGcaacaaaagaaaaagagttATTTTCAGAACGAACAAAAAAACCTGACATGAGAGAACAGATTATAGAGGAGCAAATAGAAGAGTATaaaaagaaacgagaaaaaGTGTTAGGTGGACATGCCAATATTTCAGTTCCAGTAAAAGAAGAAGTTCAAGCACGTTATTTTAAACGGAATGAAATTCAAGATAACCAAAAATCTTCAACATACTTAGAAAATGATTCTACTAATAAATTAGAGCCTGATAAGGATGATAACGACAGTAATACAGTTACTCCTAACATCGAGAATGATGTTTCAGAAAACATAGATCCTGTTAAAGAAAAATCCAATAACGGAAAAACTTACGTTAATACCGAAGAATATTTGTCAAGATTGGCAAAGCTTAAATTAAAATGGGAAGAagccaagaagaagaaggagtcTTTACAAAGGCAACTTGACGAATCTTATACAGAAGGAAATATTGAAAAGTTAGCAAGAATTttaggagaaaaagaaaagaacttACAGGATTTTCAAGATTATTTGAAacagagaaaaattgttattaccAGATTAAAAGATGAAGATATTATTTCTCTGTATGAAGATAGGAATAATGCAGTGCTTAAAAACAGTTTACCTGATCTTATAGATGAAACACAACCAGCAGATTATATTCCAGAAGAACATTACTTGGAATGTGATTACTGCCCAGAAACATTTGCTTCGAAAGAAATACTTGAAGAACACTTAAAAATGCATGATTATAAGATTATGCACTTTTGTGAAGATTGCTCGGAAGAATTTCCCACTAACAAAGCTAAAAGAAATCATAATGTGATGTGCattaaaaaatttctgtgtAAATATTGTGATTTAATGCTAGACTCTAAAGGGAAAAAACGACAACATGAACAAAAACATTGTGACAGTATGTTTGGACAGTTATGTGATGTGTGTGGTGAGAAATTCAAACATCAGGGAACTTTGGATCAACATGTTAAAACACAGCATATGAGCTGggaaaaaatatatcaatgCCCTAAGTGCCCTAAAAAATTTGCATTTAAGCAAAAACTAAGTTTTCATCTGAAGTCTGTACACACAACTTTAAGAGCCTATTTGTGCGAAGACTGTGGAGCAGATTTCAAAAATCCTGCAAGTCTTAGACATCACAGAATACGTAAGCATCAACCAGTAGGCAATAAAAGGGAATGTCCAGTTTGTCATAAGTTAGTACCCTTTTATAGTTTGTCTAAGCATATGCATACACACAAAGCTTATACTATTCAATGTCCACACTGtgacaaaatgtttaaaaatacttcaaCTTTGAAACAACATGTAAGGATTCATGAAGATCAACGGCAGTATCGATGTGATACATGTGGTGTTGGGTTTAATAGGCGTGATGGTTTAAGATTACATATGAGAGTACATGAAAAAACTGACAGTAGAGGGTTAAAAGAGTGTTCATGTCAAATATGCGGTGAAAAGTTTCCAAATCACTCAACATTAGTGATACATAGAAATCGGGTTCATAAAGATGGTAGACAATATACATGCCACATATGCAATAGGTCAATGATATCAACTAGGTCGTTAGAATGGCATATGTCTCACATACATAACGAATCCCTTCCTGGCATTGTAAAGGAAGAGATTGATGGAACGCCAGAAAACAAAAGAGTATCATGTTATCATTGTAATAAAActtttaaaacagaaatgatTTTAAGAACACACATTAAAAATACGCACATGGAGAAAGATCCAATGAAATGTTTGGATTGTGAATTAACATTTACTTCTGAAGTAAGATTAAGACATCACATGATGGTGACTCATAATAGGCTAGAAGGAACTTTGCCATGTCCACATTGTCCAAAGAGATTTGTTAACCAACTGAGATTAAAGACTCATATGATATCTCACTCTGAAGAAAGGCCATATACATGTGAAATCTGTGGATTCAACTTGAAAACAAAGATACAGTTGATCAAACATCATCAAAATAGGCACAGTGATGAACGGCCATTACAGTGCAGATATTGTCCCTGGAGATGTAAACAGGTCAGCGCTCTTGTGTGTCATGAAAGAACGCATACAAATGAAAGACCATATTCTTGCAGTGTATGCAGACAACGTTTcaaatatttaggtgataaaaATAAACATGAGAGGAGACACGAAAGTTTAGGTGGTTCTGGATTTAAAAGAATAGTGCCTGGTAGGAATATTAAACCAAAAGTACAAGAAGATTCTTCTTGTTCTGAGCAAGAACACGAAGGATTAAGTCATGTGGAGACTCAGCTTACTGAAGGACATTATGAAAGAGAGACAGATCAACAATTTGAGGAAGAGCAAGTAGTTAAGTTTGAAGAGCAggaaataacaaaatttgaagagcaagaaattgcaGAAGAATATGAGCAAGTGTATGAGCAGGAATACGAAGAAACATCCAGAGAGGCTTCTGATGCAGCAGAAGTTATAATGAATATGGAAGATACCACTGTTTATACGGAAGAGGTAACTGCAGATAATATTGAATCTGCTGAAATAATGGCAGATGAAATGAtaacaaatgaaatattacaaTCTGGTACAGTGGTTCATTTACAACAAGAAGATGATTCAGGGAAAATACAAGTGATTCCAGTAATGCTGTCTTTGCCTGACCTATCTGATACGAACACAGAGGTCAATTTAGCTACAGCATCCATTATGTATAATAATTAA
Protein Sequence: MQNTEVNNRDHNYSEVKLDNSQYSESNVQNIFNDDSCTLLCKSNKSTSSNKEPFGQIRDINELKKITPRVKLLAHDASSLNELTKISLHNKVSGQNKLPISEQTKEELKKYCRTCAGLKLPLVDIFSEKGVQMRLSQQIKHLEEINPYDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHITLTDTAAKSLEASRLRSLADSEDAEKLSQDALEYNAICVSTSKEHEVEEDVPKISEIFSIKGEPESPKEVENIDADSGNKTEPEIFEEIAIQQNSDDNESIEEFDPDDPPFQPDSSDVADSDDDIDDVQTQNLKKRNTPKKENITKQESQQIYICDNNSFQNNEDIDFNQTVYKYDLALKAYVKVDDVQDDNYNTELQTSQTSEVYSESTKESSKQPNILKRRLLSQTKKESTDEIDENTCPSSISDKNESQKDFKVQKLDVHNPLSINSGQEDGIMYVTVKGSKPNEILLVKVKKMDKPLEKKEDKFVGKKGFDIKPMEKILKRYETFATKEKELFSERTKKPDMREQIIEEQIEEYKKKREKVLGGHANISVPVKEEVQARYFKRNEIQDNQKSSTYLENDSTNKLEPDKDDNDSNTVTPNIENDVSENIDPVKEKSNNGKTYVNTEEYLSRLAKLKLKWEEAKKKKESLQRQLDESYTEGNIEKLARILGEKEKNLQDFQDYLKQRKIVITRLKDEDIISLYEDRNNAVLKNSLPDLIDETQPADYIPEEHYLECDYCPETFASKEILEEHLKMHDYKIMHFCEDCSEEFPTNKAKRNHNVMCIKKFLCKYCDLMLDSKGKKRQHEQKHCDSMFGQLCDVCGEKFKHQGTLDQHVKTQHMSWEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECPVCHKLVPFYSLSKHMHTHKAYTIQCPHCDKMFKNTSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQICGEKFPNHSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESLPGIVKEEIDGTPENKRVSCYHCNKTFKTEMILRTHIKNTHMEKDPMKCLDCELTFTSEVRLRHHMMVTHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVPGRNIKPKVQEDSSCSEQEHEGLSHVETQLTEGHYERETDQQFEEEQVVKFEEQEITKFEEQEIAEEYEQVYEQEYEETSREASDAAEVIMNMEDTTVYTEEVTADNIESAEIMADEMITNEILQSGTVVHLQQEDDSGKIQVIPVMLSLPDLSDTNTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684931;
90% Identity: -
80% Identity: -