Basic Information

Insect: Cerceris ruficornis
Gene Symbol: ham
Assembly: GCA_963989415.1
Location: OZ022523.1:3280381-3294839[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.003 0.53 12.0 0.2 2 23 116 138 115 138 0.95

2 9 0.06 10 7.9 0.2 1 23 145 168 145 168 0.94

3 9 1.4e-05 0.0024 19.4 1.5 1 23 174 201 174 202 0.93

4 9 4.3e-06 0.00075 21.0 2.6 1 23 208 230 208 230 0.95

5 9 2.6e-05 0.0046 18.5 5.0 1 23 236 258 236 258 0.99

6 9 0.00067 0.12 14.1 0.6 2 21 266 285 265 286 0.94

7 9 6.1e-09 1.1e-06 29.9 1.2 1 23 643 665 643 665 0.99

8 9 3.2e-07 5.6e-05 24.5 1.7 1 23 671 694 671 694 0.97

9 9 9.1e-06 0.0016 20.0 3.4 1 23 700 722 700 722 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.003	0.53	12.0	0.2	2	23	116	138	115	138	0.95
2	9	0.06	10	7.9	0.2	1	23	145	168	145	168	0.94
3	9	1.4e-05	0.0024	19.4	1.5	1	23	174	201	174	202	0.93
4	9	4.3e-06	0.00075	21.0	2.6	1	23	208	230	208	230	0.95
5	9	2.6e-05	0.0046	18.5	5.0	1	23	236	258	236	258	0.99
6	9	0.00067	0.12	14.1	0.6	2	21	266	285	265	286	0.94
7	9	6.1e-09	1.1e-06	29.9	1.2	1	23	643	665	643	665	0.99
8	9	3.2e-07	5.6e-05	24.5	1.7	1	23	671	694	671	694	0.97
9	9	9.1e-06	0.0016	20.0	3.4	1	23	700	722	700	722	0.99

Sequence Information

Coding Sequence: ATGGAAACGCGAATTTTTTCGTTTCAGGTCCGCACATCTGGAAGCGGAGTGAGAGGGTGGTTAGACGCGTCCCACGAGGCGAACAATTGGCTGAAATATGTCCGAAGTACTGCCAGTCCGCAGGCGGTGAATATGCGACACGTGCTCGTTGGTGGACAGATGGTGTACGAGGCCGTGAGGGACATAGCGGCGGGTGAAGAGCTTTTTCTGGGTCTTCGAGAACCTCTTCAGTTGCAGGACATGCTAGGCGAAAACACGACCGAGGACAGAAGCGATCGGGAGACCGCCTCGCAGCACAGTGGTACGGTCGACGAGGAcaaggaggacgaagaggagggcGAGATCAGATGCCCCGTTTGTGACAAGCCGTTCCAGGACATTGAATTATTGGACAGTCATCTGGTAACCTGTCACAGATATCCAGCGGAGCAACATCGCTGCGACACTTGTCCACGCGCGTACACCTGGCGACCGCTTCTCGTTCGTCATCGTGCCATCGTTCACGGCGACCTACGGAACTATCCCTGCGAGAACTGTCCAAAGTCGGACAATCCACAGGTCTTTACCGATCCGTCGAATCTTCAGCGACACATCCGAACGCACCACGTGGGAGCGAGGAGTCACGCGTGCACGGAGTGCGGGAAAACCTTTGCTACGAGTTCCGGGCTCAAGCAGCACACCCACATCCACAGCAGCGTGAAACCGTTTCAGTGCGAGGTGTGCTTCAAGGCTTACACCCAATTCTCCAATCTATGCCGGCACAAGCGCATGCACGCCGATTGCCGCATGCAAATCAGATGCGTTAAATGCGGCCAGTCGTTCAGCACCGTCACGAGTCTGTCGAAGCACAAGCGATTCTGCGACTCCACCACGCCGACCGGGCCTCCTGGAGCCATGCCGCAGCTACCGACCTCGGCGCCGAGTCCGTTCCTCGTCTATCCTCGACCTCCGGTCGGTCTTCCGGGCGGTCTTCCGGGCGGTCTTCCCTTCTATCCGCCCAGTCTCATGGGTCCGTACCCGGGAATCTTCCCGAACGCTCCGAATTTCCTCAACACCCCCCTCGTTCTCCAACCGAAGGTCGAGGAATCGGAGAAGAGAAGCGACAGTCCGAAGAAGGAGCGATTCACTCCGCCCCGAGTGCTCCCGCAGCACATCAAAGTCTCCCCTTCGACCGCCGAAGAGGCTACGTCCTCGTTCAGGCCCTCGCCGGCAAGGCCTCCCGTTCAACCTACTCCGGAGAGCGACGATGATCCTTCCAAGAGGAGAGAAGCAGCCAGAACGAACAAGAAGATCCACTCCGAGTCCACTACCACTGCCTCCACCGAGGACACCACGGATCAACCTCTGGACCTCAGAGTGCAGACCAGGAAGCAGAAAACGAGCTCTGGCAATGCCGAGAGAAAAAGTTCTACTCCTTCACCGGCACCCGTGCCGATGGAGGAGGCTCCGCCCCCTCTCGATCCAAAGCCGGAGGAACATCCGGTCTCGTCGATCGAGATGGACTCCAAAGACCTCCCTAGCAGTCCGCAGCTCAGGACCAGTCTTTCTCTCGAGCAACCACCGACGAATACTCCACCGCACATGGCGTATCCGCGACCGATACATCCCATGTTCCTCGAGGCGATGTATCGAGGACCTACCGGCACCTTTCCCGGATTCCCCGGTGGACCTCCACCTCCTACTGGAGCAACCGCGGAGTCTAGGCTGCTACCACCGCTTCCGCCCTTTGGACCACCCCGTGGACTTCCTTTTTTAGGAACTCTCATGAACGGACTCAGCGGAGCTAGGCCAGGCGGAGGTGGTTTCGACCTGCTTGCCAGGCCACCCCTGGGAGCGTTTCCCGGCGTGAAACCGTTTCAAGAGGCCGTAATCTCGCCCCATCATCATCACCACCATCACCACGCTCACGGGAAGATAAAGGATCGTTACTCCTGCAAGTTCTGCGGCAAGGTCTTCCCCAGGTCGGCCAATCTGACGAGACACCTGCGAACGCACACCGGCGAGCAGCCCTACAAGTGCAAGTACTGCGAGAGGTCCTTCAGCATCTCGAGCAACCTTCAACGGCACGTGAGAAATATCCACGACAAGCAGAGGCCGTTCAAGTGTCCTCTGTGCGAGCGATGCTTCGGTCAACAGACGAACCTCGATCGCCACCTGAAGAAGCACGAGGCGGATGACGGAAGCGGCGTGGTTTCCGTCGCGGACTCGCCTGGAAGCAGCAACGAGAACGAGCGCGAGGACGCGTACTTCGACGAGATAAGATCGTTCATGGGAAAAGTGACTTACGGTGGCGAGGCCGGATACGGGCTGCCTCATCATCCGGCGTATCTGCCGGGTCGTTTGCACGAGATCCACGAGTCGAAGATGGAAGTCGAgtacgacgaggacgaggacagCGAGGAGGGAGTGTCTCCTCTGGAGGAAACCGATGGCCTCTCACCCGTGGAGGCCAAAGAAACCACCCCACCGCCGCAGTACGATCTGAAGCTGAGGGAGAAGCAGGAGCTGCTCAACAACAACACGGCAGAGCCGGTCATCGAGATCTCCACATAG
Protein Sequence: METRIFSFQVRTSGSGVRGWLDASHEANNWLKYVRSTASPQAVNMRHVLVGGQMVYEAVRDIAAGEELFLGLREPLQLQDMLGENTTEDRSDRETASQHSGTVDEDKEDEEEGEIRCPVCDKPFQDIELLDSHLVTCHRYPAEQHRCDTCPRAYTWRPLLVRHRAIVHGDLRNYPCENCPKSDNPQVFTDPSNLQRHIRTHHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIRCVKCGQSFSTVTSLSKHKRFCDSTTPTGPPGAMPQLPTSAPSPFLVYPRPPVGLPGGLPGGLPFYPPSLMGPYPGIFPNAPNFLNTPLVLQPKVEESEKRSDSPKKERFTPPRVLPQHIKVSPSTAEEATSSFRPSPARPPVQPTPESDDDPSKRREAARTNKKIHSESTTTASTEDTTDQPLDLRVQTRKQKTSSGNAERKSSTPSPAPVPMEEAPPPLDPKPEEHPVSSIEMDSKDLPSSPQLRTSLSLEQPPTNTPPHMAYPRPIHPMFLEAMYRGPTGTFPGFPGGPPPPTGATAESRLLPPLPPFGPPRGLPFLGTLMNGLSGARPGGGGFDLLARPPLGAFPGVKPFQEAVISPHHHHHHHHAHGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDAYFDEIRSFMGKVTYGGEAGYGLPHHPAYLPGRLHEIHESKMEVEYDEDEDSEEGVSPLEETDGLSPVEAKETTPPPQYDLKLREKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539779;
90% Identity: -
80% Identity: -