Cruf026245.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cerceris ruficornis
Gene Symbol
-
Assembly
GCA_963989415.1
Location
OZ022523.1:11299395-11303619[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 3.6 6.3e+02 2.4 0.0 2 17 59 74 58 75 0.90
2 21 0.54 95 4.9 5.3 2 23 248 270 247 270 0.96
3 21 0.021 3.7 9.4 2.8 1 23 320 342 320 342 0.97
4 21 0.19 34 6.4 1.6 1 23 391 413 391 413 0.98
5 21 0.0031 0.54 12.0 0.4 1 20 468 487 468 489 0.93
6 21 9.6e-05 0.017 16.7 2.4 1 23 529 551 529 551 0.98
7 21 0.00029 0.052 15.2 0.3 1 23 599 621 599 621 0.97
8 21 0.00072 0.13 14.0 0.1 1 23 627 649 627 649 0.97
9 21 1.4e-05 0.0025 19.3 1.3 2 23 693 715 693 715 0.96
10 21 0.02 3.5 9.4 2.0 3 23 724 745 722 745 0.94
11 21 1.4e-05 0.0024 19.4 0.8 1 23 752 775 752 775 0.96
12 21 0.015 2.6 9.9 0.1 2 23 784 805 783 805 0.91
13 21 0.15 26 6.7 0.3 1 20 863 882 863 882 0.97
14 21 0.00069 0.12 14.0 0.5 2 23 902 923 901 923 0.96
15 21 0.00012 0.021 16.4 1.9 1 23 937 959 937 959 0.97
16 21 0.00012 0.021 16.4 2.7 1 23 981 1004 981 1004 0.94
17 21 0.12 21 7.0 1.9 2 23 1058 1080 1057 1080 0.92
18 21 0.0041 0.72 11.6 0.4 2 23 1107 1129 1106 1129 0.93
19 21 0.032 5.6 8.8 0.6 1 23 1136 1160 1136 1160 0.92
20 21 0.013 2.3 10.0 1.8 1 23 1165 1188 1165 1188 0.97
21 21 0.072 13 7.7 0.7 2 23 1218 1240 1218 1240 0.94

Sequence Information

Coding Sequence
ATGGACGAGGTGGTTGAACTGCAAAACATGGATAATGTGTGTAGACTTTGCCTTTCTACCGATGAACCTAAATCGTCGGTATTCGGAGTACAAGATCCTCCGGTATCGCTAGCAACTAAGATACAAGCCTGTTTGTCAATTCAGATTTCAGCCACTGATAGGTTACCAACATTGATATGTGCGGAATGTGTTAAAAGCGTGAATCAGTGGCATAATTATAAAGAACTATGTCTTCGTTCTCAAGACAAATTAAACCAGTGGTTGGAAACACATTTACAAGCGAGTCCAATGGTTGTCACCATTAAGGATGAGCCTGTTGATTTAGATTTCTATGAGGATAATATTGAGGTTATTTCAGAATCTAATGATGATTCAATTTCGGATGCAGTTAACCTTGCAACGGTTACGAACAATGTAATACAAAATGATCATGTTGAGGAATTAATTGATGACGATGTCAATGTACATAAAGATAAGGATGCGGAGATAATTAAATTAGAACTCAGTAAAGGTACCACTGTACCTGTGAAGTCTGAGCCACCTGACGACTATGATACAGACTGTACTATAGAGATAGAATCAGTTACTGGTAGTGAGTTGCTGAATAATTCAGCATCAAAAGAAGATACAGTGATGGAAGCTGATTCGACACAAAAATCTAACACAGTAGCCACAGTAAACAAGAAAAAGGTCAAGCGTGGTCCTCATACTCATTTTAGAGGAACACGCATATTCAAGCAAAAGTGCACACACTGTCAGATTAACTTGCATTCTAGATATTCATATGCAAAACATATGGAAAGATTCCATAGCCAAAAAGAAGAGAATAGTGGCAATACGTCACAGTCTCAAGATGTCGAGGAGTTAGTGGAAGACGTGGAGGATGAATTAATGAGCATGGAAAAAGATGCATCTTTGACCCAAGTGCAACAAAATATTATTAGTCAATTAAAAACATTCTCTTGCTATTCTTGCCAACAGACTTTTACCGATCGGAGAAGTACGCTTTCTCACATTCGTCAACATATGCCAGATTTGAGATCGTATACTTGTATCGCTTGTTTAACAGAATTTCCTGACAGATCAATGTATAAGTTGCACTGTGGTGCTTCGTTTGAATGCGCTATGAAAATTGCATTAGTTGTACCAAAAGAGGgagaagagaaatattttacctGTAATATGTGTTTACGCTCCATGCAAAACAGAAAAGAATTACTTAGTCACCTATCCAAGCATTCGGAAAAGCAGTACGAAGAACTTACGTCACCGATGAGATCTCCACCCAAATTGAAGCCAATGGGACCGCTGCCAAAGCCTAAAAATGATGTGATACAAAGACCATCCACTGGAGATATAGAAATTCCAGGTCCTTATAAAAACGGCGATCCCGCGCACAATCATGTTTGCGATTTATGTGGAATGATATACAGATATAGGCCTAACTTGTTTAAGCACAGAGAATCATGTCTACGATTAATGCCAGACGTTAGAACGTCTTATAAATGTATACATTGCGGAATGACGTTTCTTATATTCAAAAGATTTCATACTCACATGACTGTTGATCACAAGAAGAAAGAATTCACGTGTTCGAAGTGCGGAATTAAGTTCAGATCACCCAGCGACTATCTGACCCATCACGAAAGTCACCGTAACGTGCACAACGAACGACAAATCcgcgagaaaaagaaagagattaTAACCTCTCAACAAAATCCCTCAAACTCCATCAAGGATTGGGATACCTTCGAGGCAGAGGTGAACGCTAGGAAGATAAGCGACAGCAACCACTACAGTTGCGCCCTTTGTAATTTAGAGTTCACCACTAGAGCAGAACTGACGGAACACCGGAACCTTCATCTGAAGGTGAAGATATATTCTTGCGTTATTTGCCGTAGTATGTTCAGCAGCGCCGGTGCTCTGGAAATTCACATGAAAGATCATGGTATCGAAGACCCAAACGAACGTAACGCAAACATATCGTGCGTTGAGTATGGAACCGTCGACGAAGATTCACAAGGTGCGACCTCTATGAACGCAAGTGCTATTTCCGATCCTGAAACGCGTAAAAACGAGTGTCACGCTTGCACCAAGGCATTCTCTAATTACGCCAATCTCAGAAGACACATCAGAAACGTCCACAAGAACGAGAAAGCTAATATCAATTGTCCTCAATGTTCACGAACGTTTAAGTCCAAGGACATGTGCGACCGTCATTTACAGATTGAGCACAAGTCCACGAAAACTATGCATCAGTGTCCTCAGTGTCCCAAGAGCTTCGTATTCCAAGCGAACTTAAATCTTCACTTTGAAACCGCTCACGGTGAGAAATCACAGGGTGGTCAGAAGTGCGATATATGCGGAAAGGTGTTCCTCGAAGAAGCATCTCTAAAGATTCACAGAGGTTGGCATAATCGTGCAAATTCTCGTTTGAGTATGCAATTCTTAATGAACAACGATCGGCAAAGCACAAACAACGTATCCCCGACCAAACAGGAACAGTCATATGATGGGAACTTGGGTCGACCTGCCAGAGCGCGAAAATCCTTCCCCAATCCACCACCGACCAAGCCAGAGAACAATTTCCAGTGTCAAGTGTGCTACGACAAATTCAACGACGTGGCAGATCTCAGGAAGCACTTGTGGGAAGTACATTGTGCACGTAATAAACCCGAGAAAAGCTTCTCCGGCGATGAGCTTCAGTGCGAGCTTTGTACAAATGTTTTCCCGGACCACGAAACTCTGAATAACCATATGCAGTGGCACAAGGCTCATCCTATCTTAAGTGATATAAAGAAGACAAACTTCCCTTGCGAGGTTTGTGGCAAGCACTACAGCTCTAAGAAAGTTCTCTGGAGACACAAAAAACTACACAAGGCTACTACAGTCGCATCCATGAAGTTCCAATCCGTCAATAAGAAGCCTGTGGCCAGTCAATACTTGTGTACAGTTTGCCGCAAGGTCTTCAGCAGTAATCAGTCCTTACAGCGCCATAAGTTCACCTTCCACAATGACCCGTTCAATCAACGATCGCAACAAATACACAACAATACACGAAGATTATCCAATGAGGAACACGCCGTGAAGAAGGTGAAGGTCGAGGTCGAGGATCAATCTCAAGAAATGAATTTCTCCGAGGCTATTCCCGTCTCCGGCAAGAAGCCGGTAACATGTCACCTTTGCAAGAAACTCTTCCCAAACATGAGTGTACTTTACAAACACAAACAGTTCGCCCATAAAAATCGCACGACCCGGAACATCGTTAAGCCCCCGAGCAACGAGTGTGTACCGCTGCTAGGTAATGACGGTAAGGTATCTTGCAACATTTGCTACAAAGAATTCCCGGGTGTGTCGAATTTGCGTCAACATTTCACAATGAAGCACAAGTTCTGCCCGCCGAAGCATGCCTGCCACGTGGAGGGTTGCAAGATGATATTTCCTACCGCGATATCGCTGAAGAAGCACGAGGTGTCTCATACCAGTATGATCTTTAGCTGTAATTTGTGCGATCGGCACGTGTTCAACAGACTGGCAATGACAAAGCACATGTTAACTGTGCACAATACCATTTACGATGCGGAGATTAACAAGAACTTCCATAGAGAAACTGATTTGACTACGTACGTGGTAGAAGGGGCCGTCCATGCGACATGCCCTCTATGCAAGATCAAGTATCCGAATAACAGAGCCATGAAGATTCATTACTTCAAGTTCCACGAGGCAACCGATCAGCATTAG
Protein Sequence
MDEVVELQNMDNVCRLCLSTDEPKSSVFGVQDPPVSLATKIQACLSIQISATDRLPTLICAECVKSVNQWHNYKELCLRSQDKLNQWLETHLQASPMVVTIKDEPVDLDFYEDNIEVISESNDDSISDAVNLATVTNNVIQNDHVEELIDDDVNVHKDKDAEIIKLELSKGTTVPVKSEPPDDYDTDCTIEIESVTGSELLNNSASKEDTVMEADSTQKSNTVATVNKKKVKRGPHTHFRGTRIFKQKCTHCQINLHSRYSYAKHMERFHSQKEENSGNTSQSQDVEELVEDVEDELMSMEKDASLTQVQQNIISQLKTFSCYSCQQTFTDRRSTLSHIRQHMPDLRSYTCIACLTEFPDRSMYKLHCGASFECAMKIALVVPKEGEEKYFTCNMCLRSMQNRKELLSHLSKHSEKQYEELTSPMRSPPKLKPMGPLPKPKNDVIQRPSTGDIEIPGPYKNGDPAHNHVCDLCGMIYRYRPNLFKHRESCLRLMPDVRTSYKCIHCGMTFLIFKRFHTHMTVDHKKKEFTCSKCGIKFRSPSDYLTHHESHRNVHNERQIREKKKEIITSQQNPSNSIKDWDTFEAEVNARKISDSNHYSCALCNLEFTTRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANISCVEYGTVDEDSQGATSMNASAISDPETRKNECHACTKAFSNYANLRRHIRNVHKNEKANINCPQCSRTFKSKDMCDRHLQIEHKSTKTMHQCPQCPKSFVFQANLNLHFETAHGEKSQGGQKCDICGKVFLEEASLKIHRGWHNRANSRLSMQFLMNNDRQSTNNVSPTKQEQSYDGNLGRPARARKSFPNPPPTKPENNFQCQVCYDKFNDVADLRKHLWEVHCARNKPEKSFSGDELQCELCTNVFPDHETLNNHMQWHKAHPILSDIKKTNFPCEVCGKHYSSKKVLWRHKKLHKATTVASMKFQSVNKKPVASQYLCTVCRKVFSSNQSLQRHKFTFHNDPFNQRSQQIHNNTRRLSNEEHAVKKVKVEVEDQSQEMNFSEAIPVSGKKPVTCHLCKKLFPNMSVLYKHKQFAHKNRTTRNIVKPPSNECVPLLGNDGKVSCNICYKEFPGVSNLRQHFTMKHKFCPPKHACHVEGCKMIFPTAISLKKHEVSHTSMIFSCNLCDRHVFNRLAMTKHMLTVHNTIYDAEINKNFHRETDLTTYVVEGAVHATCPLCKIKYPNNRAMKIHYFKFHEATDQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-