Basic Information

Insect: Cerceris ruficornis
Gene Symbol: -
Assembly: GCA_963989415.1
Location: OZ022523.1:19627820-19639006[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.063 11 7.9 3.1 1 23 402 424 402 424 0.97

2 19 0.00026 0.046 15.4 1.0 2 19 460 477 459 481 0.90

3 19 0.0011 0.2 13.3 6.3 1 23 487 509 487 509 0.97

4 19 0.001 0.18 13.5 0.1 3 23 517 538 515 538 0.93

5 19 0.42 73 5.3 1.8 1 23 545 568 545 568 0.98

6 19 7.6e-06 0.0013 20.2 0.8 1 23 572 594 572 594 0.97

7 19 0.0013 0.23 13.2 0.5 1 23 600 622 600 622 0.98

8 19 7.1e-05 0.013 17.1 2.0 1 23 628 650 628 650 0.96

9 19 0.0028 0.49 12.1 0.1 1 17 655 671 655 672 0.90

10 19 5.5 9.6e+02 1.8 0.4 2 15 1167 1180 1166 1185 0.74

11 19 0.69 1.2e+02 4.6 1.6 1 23 1194 1217 1194 1217 0.98

12 19 0.00064 0.11 14.1 0.3 1 23 1223 1245 1223 1245 0.97

13 19 0.12 22 7.0 0.5 1 23 1251 1273 1251 1273 0.97

14 19 3.2e-05 0.0056 18.2 2.2 1 23 1279 1301 1279 1301 0.98

15 19 2 3.5e+02 3.1 0.4 2 23 1308 1330 1307 1330 0.94

16 19 5.5e-05 0.0096 17.5 0.7 1 23 1334 1356 1334 1356 0.98

17 19 0.019 3.3 9.5 0.7 1 23 1361 1383 1361 1383 0.98

18 19 1.2e-07 2.1e-05 25.9 0.3 1 23 1389 1411 1389 1411 0.98

19 19 0.0011 0.18 13.5 2.0 1 21 1416 1436 1416 1437 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.063	11	7.9	3.1	1	23	402	424	402	424	0.97
2	19	0.00026	0.046	15.4	1.0	2	19	460	477	459	481	0.90
3	19	0.0011	0.2	13.3	6.3	1	23	487	509	487	509	0.97
4	19	0.001	0.18	13.5	0.1	3	23	517	538	515	538	0.93
5	19	0.42	73	5.3	1.8	1	23	545	568	545	568	0.98
6	19	7.6e-06	0.0013	20.2	0.8	1	23	572	594	572	594	0.97
7	19	0.0013	0.23	13.2	0.5	1	23	600	622	600	622	0.98
8	19	7.1e-05	0.013	17.1	2.0	1	23	628	650	628	650	0.96
9	19	0.0028	0.49	12.1	0.1	1	17	655	671	655	672	0.90
10	19	5.5	9.6e+02	1.8	0.4	2	15	1167	1180	1166	1185	0.74
11	19	0.69	1.2e+02	4.6	1.6	1	23	1194	1217	1194	1217	0.98
12	19	0.00064	0.11	14.1	0.3	1	23	1223	1245	1223	1245	0.97
13	19	0.12	22	7.0	0.5	1	23	1251	1273	1251	1273	0.97
14	19	3.2e-05	0.0056	18.2	2.2	1	23	1279	1301	1279	1301	0.98
15	19	2	3.5e+02	3.1	0.4	2	23	1308	1330	1307	1330	0.94
16	19	5.5e-05	0.0096	17.5	0.7	1	23	1334	1356	1334	1356	0.98
17	19	0.019	3.3	9.5	0.7	1	23	1361	1383	1361	1383	0.98
18	19	1.2e-07	2.1e-05	25.9	0.3	1	23	1389	1411	1389	1411	0.98
19	19	0.0011	0.18	13.5	2.0	1	21	1416	1436	1416	1437	0.94

Sequence Information

Coding Sequence: ATGGAGTTGGAGGAAGAGGCGCAGATTTGTCGACTTTGCGGTCAGTGCGAGAGTATATACATCGATGTATTTGGCGAGGAAGGTACTAAGAGATTCTTGGGCTTGAAGATCCATACGAAAATCAACATTCTGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAATGTCTGGGCAAGCTCGAATTCGTTTGTGACTTCCAAGAGGAGTGTCTACGCACCCAACATCTGTTACGCAATCGATACAATCTACCACCCTTAACAGAGATTGTCGAAGTGAAAACTGAAGATATAGCACCAAGCACATCAACaaacaataacaacaatatTGATAAAGATCTTAATAATTCAAATGAGGAGAATATTAGAAATATAGACCAACGTGTTTTGAGACACGCAACAAAGTCTCCCAGAAACTTACGAAATCAGcagcaattattaaaaaatactgaGGAATCTCCAAAAGATCAGAATAATTCACGAAATAGCAATGAGCAAAATATTGAGAACATAGGGGCCACCCCTACCTCTGAAACCACTCCAACGCGTTGGCTTAGAAGTAGACAAACTGTAGATACAAATTCCACTACCAGTAATGAAAATACAGTAGACACTCCAATTGCAAATAGACTTAGAAGTCATGATAACTCTTCCAGTGAAACGGCTGTTACTAATCCTAAttctcgcaactctaataatacGAATGAAACAACGACAGATAAACAAAATACGAAGCAGCAAGATCCACaaacaattaaaattccaaCTTCTGCTTTGAACAAGCTCCTTACTATCGTCTCCAATTCCCAAGACATAGACGTCTCTGTAAAAGAATCCCGAAATCATAGTAACGATACAGAGGACATCAGTTTCACTGTAGAGTTATGCAAAAAAGAGAACGATGATGAGACCACTGTGGTAAGAGCAAGAGTATTTCCAGATCAGGGCTCATGTTTGGTAGATAAGGGTATCGTGAATCTGCTACAGAATCAGAGTTGTGTAGAAGTGAATAGTATAATAAATACCATTATCAGCAGTAGCGTGAAAAATGGAAATTCTACAAAAGTGAAGGATCCTGCGGAGTTCGAGCAAAAGTGGCAAGCCTCCCAGAATCCGGAAGAACTGTTCAGGATCGACGGCGAAGAAGTACGTGTAGACGACAACATCGAGCATATTGTGACGGATAATCAAAACGGCTATGCCTGTAAACTTTGTCGCAAAGTCTACGAGCGTAAAGATAAATGCATGGTACATGTAAAAACTCATCTTGGCATAAAACAATACACCTGTATCTTGTGCAACGCCAAATTCGTATGTAAGTCCGACGTAATGAAACACATTCGATGCTCGCACACTAATCCAAGGCCCATACAATGTCCAAAGTGTCCGAAAAGGTTTAAATCAAAGTTCTACTTAACAGAACATGACAACGTGCACAAAGGTGTGAGGCCTTATTGTTGCCAGGAGTGTGGACAGAGTTATCATCATAAAGTGTCATTACAGATTCATATGAAATTACATTTACCGCCGCAAAACTTGGCTTGCGAATACTGCGGTAAAGTATTTCCATATCGCACGAGACTATTGAGTCACGTTGCTAGCGTACATTTAAAGAATAGACGGAACTTTAGGTGCCGTTTTTGTTATAATCTTTATTCCAGTCTTTCGGTATTAAACGAGCATATCAAAACACGCCACGCGACTACCTACACTTGCGAGGTTTGCGGTAAAACATTTAAGGTCTCCTCCAAATATAAAGCGCACGTTCTACAACACTCGAATCCCAAGCCTTTTGTGTGCAACATTTGTAACAATAGATACGCGTCGAAAGCATTTTTAAACGAGCATCTATTGAAGCACGAGGGCTTACGGAAACACATTTGCCAGAAATGTGGTGCGAGTTTCGCGCAAGCTAGTCATCTGGCAGCGCATCGGCATGTGCATGGCGAGAAGAAACACGCTTGTCCAGAATGCGGAAGGAAGTTCAATAGGCGCGATAACATGAAGATCGAAGAAAATGATGGTTTACCGCAAAGAGTTTGTGTGCGATGTTTGGGCACATTGGAATTCCTCTGTGACTTCTACGAACGCTGCCATCTCACGCAAAAGGAATTTTCGGAAGCTcaAAATGAGAAGGTCAATGAAACTAAAGCAGACTTTACTGAAGAAAGCGACGCTGAATCTGACAAAGAGAATGCTTTACCACCGCCGAATAACATGAAACGTAAAGTGAAAATCTCATCTTCTGATAATACAAAAGCCATTAAATCTTGCCTAAATGAAAACAACGTTCACCAAAGTGAGACGAATAATCACAAAAACTCTTCCAACATCGAGCCAGCCATGCAAACAACGCTGCAACTAAGTAATCACCTTACTAACAAAGAATCAATGGTAGATGTAATTGTccctgaaaaaaaagaagaagacaaAAATTTGCATGTCGTAAAACATGAGAATCATGCACCAAAGAAAGAGTATGCCTCTCAGAAAATACTAAGACGTTCTATTAGGTCGTtgaataattctataaataaggAAAAAAGTAGGAAAAGCGAAAGTAATATCAGTACTACAACTTTGGAGAAATCTTTACGTCGTAAAAGAGGTAGGATAAGTTTGAATCGGTCCACTGTAAAAAGAGCAATAAAAAAGAGCTTGGACAATAAGAAATCTGAAGATCCAACCACGACACATTCTGGTCAGCCTATGAGGCATTGTTTACGCACGATATGCATAAACAAATCTAATACATTGGACACTGTCGcattaaagttgaaaatgcaATCGTTATCGGTTGAACCGAAGATCAGGATGAATGAACATGATAGTACAACCAACAACTGTTTATCGACAGAAAGTAGCACGAAAAGTAAAGCAGTATCCGTTATCGTGAAACAGGAGAAGACAGAAATCGAAGACCCGTTGTCACAGCAAGCAATAAACTTTCCTTGGGCTCCTAGCGAGATGCTGATAcaaaatccagaaaacccacAGAAAGACAATGTCGTAACGCACATGAGCCCTCCGCCGGGTGACGAAGCAGAAAGGGATAAAACTTGCGATAGTGATTCCACCATAGATAATAAGACTTTAAACCATTCGGACGTTCCTGATTCTGCTGAAATGGATGATCTAAGGCCAGTATCGTTTCAGAATCGCATAACGGTTATTAAGTCCTCTCAAACTGGCGAGATTATCGTTCCTGATATCCTAGCTCATACTGATTTAAGTAACATAGAAAGTACCATGGATCAGAGCACGAGAGATAGTTTAGGAAGTGATTTTGCGGAACGGTCATTTTCGAGACGATCAAGTCGAAATAACAGTTTTAGCGAAAACAAAAGCAAAGACGTACGTTTCGGTAAAATCTCAGAATTAATAAGCGACGAGCAGAAAGAAACCATAGAAACGTATTATAAGGTCGATATGTCAGTTGTTAATTCTGACGAAGTTACGAAGCATATAACGATAATAGATAAGAagaatataaaatgtaatatatgcGGTACGTTGTACCCTCGGATAGACAAGTGTCAAGTTCACATTTGGGGACATCTCGAGATAAAACCATATCAGTGTAAAGCATGTGATTTTGCTACGGTAACTGTCAGTAATGTTCGCTGCCATATACGAAAAAGTCATTTAAAAATTAAGCCATTCGCGTGCTATCTTTGCGAAAAGAAATACGTGACTTCTGTTTTATTGGAAGAACATTTGAATACTCATACAGGCGCCCGTCCTTTTAAATGTGGTATTTGTGACTTTGCAAGCGCCAGTCGACAAATGTTAAGCTATCATAACACAACTCATAGGTCGACTAAGGATTTTAATTGCAAAGTTTGCAGTAGACAGTTTTATTCACGAAGTAGACTACGCGCGCATATGCGGATACACAATAAGGATAAAGTCGTCATGTGTAAATTATGTTCAGCTTACTTATCGAATGTAGAAGCGTTAGAGACTCATCATAAAAATATTCACATGCAAGATTACATATGTAACGTGTGTGGTAAACGTGTCAAATCGAAGAAAGCTTTGTACAATCATCGGAATGTACACGCTGCTGCGAAATATAAGTGCCCTAAATgtccaaatatttataagagcaGACAGATCTTGAAGGATCACCTTTTAAAACACGAaggaatcagaaaatataaatgcGATGTTTGCGAAAAGTCGTTTGCTCAACAGTCTCATTTAGCTGCGCATATGGCAGTGCACAGTAAAATCCGATTCCATTGTCCTGGATGCGAAAGGGCGTTTAATCGACATGACAATATGAAGATGCACACTAAACGATGCAAACTATTCCTGGCGAATCCTGATTTACAGAATCTTATAACTAGAAAAGAGAGAAGTAAATCGATGAACAAAGTGAAGCAATTGGACACCAATTGTGCGGCAACGGATACTTATAAATCTATACGACCCGTCGAAAGTCAGACGGAGGTTGTAATTGATACAGAGAAGACTGATGCGAATCTTTGTAAGTTAGGACTGAATATTTCTTGTATTGACCCTAGGAGTGAATCTTGGGACCATGATGTACAAAATGCAGCAGAAATAATGAATTCTGTGGAAGCTGATATGATTCACATTACAAGAATCGATAATGACGTGATACCTGAGAATGGGAATTTAACTATTCGAGAAAACATTTTGGGACCAGAACacttttaa
Protein Sequence: MELEEEAQICRLCGQCESIYIDVFGEEGTKRFLGLKIHTKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQHLLRNRYNLPPLTEIVEVKTEDIAPSTSTNNNNNIDKDLNNSNEENIRNIDQRVLRHATKSPRNLRNQQQLLKNTEESPKDQNNSRNSNEQNIENIGATPTSETTPTRWLRSRQTVDTNSTTSNENTVDTPIANRLRSHDNSSSETAVTNPNSRNSNNTNETTTDKQNTKQQDPQTIKIPTSALNKLLTIVSNSQDIDVSVKESRNHSNDTEDISFTVELCKKENDDETTVVRARVFPDQGSCLVDKGIVNLLQNQSCVEVNSIINTIISSSVKNGNSTKVKDPAEFEQKWQASQNPEELFRIDGEEVRVDDNIEHIVTDNQNGYACKLCRKVYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLTEHDNVHKGVRPYCCQECGQSYHHKVSLQIHMKLHLPPQNLACEYCGKVFPYRTRLLSHVASVHLKNRRNFRCRFCYNLYSSLSVLNEHIKTRHATTYTCEVCGKTFKVSSKYKAHVLQHSNPKPFVCNICNNRYASKAFLNEHLLKHEGLRKHICQKCGASFAQASHLAAHRHVHGEKKHACPECGRKFNRRDNMKIEENDGLPQRVCVRCLGTLEFLCDFYERCHLTQKEFSEAQNEKVNETKADFTEESDAESDKENALPPPNNMKRKVKISSSDNTKAIKSCLNENNVHQSETNNHKNSSNIEPAMQTTLQLSNHLTNKESMVDVIVPEKKEEDKNLHVVKHENHAPKKEYASQKILRRSIRSLNNSINKEKSRKSESNISTTTLEKSLRRKRGRISLNRSTVKRAIKKSLDNKKSEDPTTTHSGQPMRHCLRTICINKSNTLDTVALKLKMQSLSVEPKIRMNEHDSTTNNCLSTESSTKSKAVSVIVKQEKTEIEDPLSQQAINFPWAPSEMLIQNPENPQKDNVVTHMSPPPGDEAERDKTCDSDSTIDNKTLNHSDVPDSAEMDDLRPVSFQNRITVIKSSQTGEIIVPDILAHTDLSNIESTMDQSTRDSLGSDFAERSFSRRSSRNNSFSENKSKDVRFGKISELISDEQKETIETYYKVDMSVVNSDEVTKHITIIDKKNIKCNICGTLYPRIDKCQVHIWGHLEIKPYQCKACDFATVTVSNVRCHIRKSHLKIKPFACYLCEKKYVTSVLLEEHLNTHTGARPFKCGICDFASASRQMLSYHNTTHRSTKDFNCKVCSRQFYSRSRLRAHMRIHNKDKVVMCKLCSAYLSNVEALETHHKNIHMQDYICNVCGKRVKSKKALYNHRNVHAAAKYKCPKCPNIYKSRQILKDHLLKHEGIRKYKCDVCEKSFAQQSHLAAHMAVHSKIRFHCPGCERAFNRHDNMKMHTKRCKLFLANPDLQNLITRKERSKSMNKVKQLDTNCAATDTYKSIRPVESQTEVVIDTEKTDANLCKLGLNISCIDPRSESWDHDVQNAAEIMNSVEADMIHITRIDNDVIPENGNLTIRENILGPEHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -