Basic Information

Insect: Cerceris ruficornis
Gene Symbol: -
Assembly: GCA_963989415.1
Location: OZ022529.1:14208431-14210859[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00021 0.037 15.7 4.1 2 23 281 302 280 302 0.97

2 15 0.00096 0.17 13.6 2.5 1 23 308 331 308 331 0.96

3 15 8.1e-06 0.0014 20.1 1.8 2 23 409 430 408 430 0.97

4 15 6.1e-06 0.0011 20.5 2.3 1 23 436 458 436 458 0.98

5 15 0.00087 0.15 13.7 0.1 1 23 464 486 464 486 0.95

6 15 9.4e-07 0.00017 23.1 1.4 1 23 501 523 501 523 0.98

7 15 3.5e-06 0.00062 21.2 1.2 3 23 531 551 529 551 0.98

8 15 8.6e-06 0.0015 20.0 2.3 1 23 557 579 557 579 0.98

9 15 0.00042 0.074 14.7 0.2 1 23 585 607 585 607 0.99

10 15 3.4e-06 0.00059 21.3 0.3 1 23 613 636 613 636 0.94

11 15 1.7e-05 0.003 19.1 1.3 1 23 642 664 642 664 0.98

12 15 0.00038 0.066 14.9 4.7 1 23 670 692 670 692 0.98

13 15 5.7e-06 0.00099 20.6 0.2 1 23 698 721 698 721 0.96

14 15 2.5e-05 0.0044 18.6 0.6 1 23 727 749 727 749 0.95

15 15 8.3e-07 0.00015 23.2 4.8 1 23 755 777 755 777 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00021	0.037	15.7	4.1	2	23	281	302	280	302	0.97
2	15	0.00096	0.17	13.6	2.5	1	23	308	331	308	331	0.96
3	15	8.1e-06	0.0014	20.1	1.8	2	23	409	430	408	430	0.97
4	15	6.1e-06	0.0011	20.5	2.3	1	23	436	458	436	458	0.98
5	15	0.00087	0.15	13.7	0.1	1	23	464	486	464	486	0.95
6	15	9.4e-07	0.00017	23.1	1.4	1	23	501	523	501	523	0.98
7	15	3.5e-06	0.00062	21.2	1.2	3	23	531	551	529	551	0.98
8	15	8.6e-06	0.0015	20.0	2.3	1	23	557	579	557	579	0.98
9	15	0.00042	0.074	14.7	0.2	1	23	585	607	585	607	0.99
10	15	3.4e-06	0.00059	21.3	0.3	1	23	613	636	613	636	0.94
11	15	1.7e-05	0.003	19.1	1.3	1	23	642	664	642	664	0.98
12	15	0.00038	0.066	14.9	4.7	1	23	670	692	670	692	0.98
13	15	5.7e-06	0.00099	20.6	0.2	1	23	698	721	698	721	0.96
14	15	2.5e-05	0.0044	18.6	0.6	1	23	727	749	727	749	0.95
15	15	8.3e-07	0.00015	23.2	4.8	1	23	755	777	755	777	0.99

Sequence Information

Coding Sequence: atgaatttacACGCAGGCATATTTAAAGGAAAGTTACATCATCGCGGGCAGGTTGACGTTATAGAAATGCCAATGGAATTAATGTGTAACTACAAATACTATTTCGTTTATGAAGACCAAGTATCTAGATTCGTAGTTTTAAAAGCTTTGCATGATAACACGGCTAAAGAGGTGGCAATTAAATTGCTAGATATATTGGCTATCATCGGCGCGCCTCGAGTTCTGCAGAGCAGTAACGGTCGCAAATTTGCCGAACAAGTCGTACACGAATTACGGCAACTCTGGAAAGACTTTATCATACTGCATGGAGATATTTCTGAGACTACCGAAAACCGCAGAGATTTCAAAAGTATCTTCAAATGCTGGATACAAAAGAATCCTACCAGAACGTGCTACGAGGCTTTAAAATCTGTACAGATACTCGAAAATTCGACGTTTCGcggtgaaaatgataaaattccTTACGATATGCTATTCGGTCGGAGCGTACACGAAGACTTTCAAAAACTCACCGCCATGGTAGAGATAAGAAAAAGCATATGGACGGAGGAAGAGTGGATCGGCCTCGTATgtaataaaaaagataatacCTGTTACAAAGTAGAGGAGGTAGTTATGGCGGAAGATTCTGATTTTCCAAACCTAAGAGACGCGAACAGTCAATCAGGAGACAACGATAGCGACTTTCCCAACGAATCTAGGGAGGAGCCTCTGAGAGATGGCCATCCTTTTAACTTCGTCAATGTTAGGAGCGAGCCGCTAAATATGGATGATTCCATTTTCGAAGAGGAGCCCGTTGTGGACACCAAAGCGAAGGCGTGCTTAGACGATGACGACTTGCGATGCAAAGTCTGTCGGAAGCAGTACATGAAACTAGGTCACTTAAAGAATCACATGAGAACTCACGTGAAAGAGAAGAAATTCGAATGCACCCTCTGCAACAAGACGTTTCACGTTTTGAGCCTGTACGAGAAACACGCGCGGCAATCGCACGGACAGAATGCTCTTTCCGGCCTCGGTAAAATCAAAAGAGAAAGAGCTTCGAGAAGTGCGAGCACAGCGATATCCGAGAGCAAGGATTCCTGCCACGTGAATTCCGGTGACGCTCAATTAAGTATCACGAATGACTGCACGAAAACCGTGAAGACCCTGAGTCTTGCTCGAGAGCGACGAAAACTCTCCGCCGAGAGCAGGACGATGAAGCTAAACGGTGATCCGTCTCTAGAGTGCACATACTGCAAACAGAAGTTCAACTTTCCGAGCGTACTGAAGAGGCATATGCGATCGCACACGAACGAACGACCATACATGTGCGAGATTTGTAACAAGAGTTTCAAGCAGCTTGGGCATCTTAGCCAGCATTCATTGACTCACAAAGATTATCGTTCCTTCCGATGTGCCGTTTGCGGAGTGAAATTCGAATCTCTGGAGTCGCTAAAAGTACATTCTCAGGCCCACAAAGGCGAATACGTCTCGAGAACGAAAGAGGTCTTCCGCCTGTTCGAGTGTGATAATTGTAAAAAAGTCTTTACCACTAAGAGCGTCCTCGAACGGCACATATTCACTCATACCCACGAGCGTCAATTCGGTTGTAAAATCTGCGGCAAAAGATTCAAACAGGCAGGACACGTAAAGTCTCACATGCTCGTTCATACCGGAGAGAGGAAGTTCGAGTGTACCGTGTGCAAGAAGAGATTCAGCTTGTCGAACTCCTTAAAAAAACACATGTACGTGCACAACGGTGAGAAGCCGTATCAATGCGACATATGCGGCGCGAGGTTCCTCGAGAAGAGAAATCTCAATGGGCATTTAATGACTCACACGAACGAACGTCCATTTCGTTGTAAAATCTGTGGGAAACGATATACCTTGGCGGACACTTTGAGGCGGCATATAAGCGCAGCGCACGAGGACGGACGAACGTATCAGTGCGAGATTTGCGCCAAGATGTTCAAACAGTTGGCCCATCTCTCCGTTCACAAGAAGGTTCACAACGACGAGCGACCGTTTCAGTGTCACCTTTGCGAGAAGAACTTTAAGCATAAAAACGTTCTTAAGTCTCACCTGGCCATTCACGCGAACGTTCGGCCATTTGAATGTGACGTCTGCAAGGCGACTTTCGTTAGAAAGACCAATCTCCAGACACATATAGCATCTGCTCACATGAACGAGAGGCCGTATGCTTGCAGGATTTGCGGCAAACGATTCAAGCAGATCAGTCACTTGAACGGTCACGTCGTGGTTCATAGTAACTCGATGCCTTATAAGTGTGACTACTGCGACCGAAGATGCAATAGACTAGATAATTTGAAGAAGCATATGCGTCTTCATGCAAAGAACAAAGAATGA
Protein Sequence: MNLHAGIFKGKLHHRGQVDVIEMPMELMCNYKYYFVYEDQVSRFVVLKALHDNTAKEVAIKLLDILAIIGAPRVLQSSNGRKFAEQVVHELRQLWKDFIILHGDISETTENRRDFKSIFKCWIQKNPTRTCYEALKSVQILENSTFRGENDKIPYDMLFGRSVHEDFQKLTAMVEIRKSIWTEEEWIGLVCNKKDNTCYKVEEVVMAEDSDFPNLRDANSQSGDNDSDFPNESREEPLRDGHPFNFVNVRSEPLNMDDSIFEEEPVVDTKAKACLDDDDLRCKVCRKQYMKLGHLKNHMRTHVKEKKFECTLCNKTFHVLSLYEKHARQSHGQNALSGLGKIKRERASRSASTAISESKDSCHVNSGDAQLSITNDCTKTVKTLSLARERRKLSAESRTMKLNGDPSLECTYCKQKFNFPSVLKRHMRSHTNERPYMCEICNKSFKQLGHLSQHSLTHKDYRSFRCAVCGVKFESLESLKVHSQAHKGEYVSRTKEVFRLFECDNCKKVFTTKSVLERHIFTHTHERQFGCKICGKRFKQAGHVKSHMLVHTGERKFECTVCKKRFSLSNSLKKHMYVHNGEKPYQCDICGARFLEKRNLNGHLMTHTNERPFRCKICGKRYTLADTLRRHISAAHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAIHANVRPFECDVCKATFVRKTNLQTHIASAHMNERPYACRICGKRFKQISHLNGHVVVHSNSMPYKCDYCDRRCNRLDNLKKHMRLHAKNKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -