Basic Information

Gene Symbol
ZNF236
Assembly
GCA_963989415.1
Location
OZ022529.1:14803479-14811356[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.0041 0.71 11.6 3.8 1 23 179 201 179 201 0.98
2 26 4.3e-05 0.0075 17.8 0.6 1 23 207 229 207 229 0.98
3 26 2.1e-05 0.0036 18.8 0.3 2 23 235 256 235 256 0.97
4 26 0.0086 1.5 10.6 0.2 3 23 264 284 262 284 0.96
5 26 0.00018 0.031 15.9 0.5 2 23 295 316 295 316 0.98
6 26 8.6e-07 0.00015 23.2 1.1 1 23 337 359 337 359 0.99
7 26 6.5e-07 0.00011 23.6 0.7 1 20 365 384 365 387 0.94
8 26 1.5e-05 0.0027 19.2 0.7 1 23 393 416 393 416 0.96
9 26 0.012 2 10.2 1.8 3 23 427 448 425 448 0.97
10 26 2.3e-06 0.00041 21.8 1.9 1 23 579 601 579 601 0.98
11 26 0.16 28 6.6 5.1 1 23 607 629 607 629 0.99
12 26 0.0015 0.27 12.9 2.7 1 23 635 657 635 657 0.98
13 26 0.0013 0.22 13.2 4.8 1 23 774 796 774 796 0.98
14 26 0.00015 0.027 16.1 4.1 1 23 802 824 802 824 0.98
15 26 3.5e-06 0.00062 21.2 1.7 1 23 830 852 830 852 0.98
16 26 0.00043 0.076 14.7 7.6 1 23 858 880 858 880 0.98
17 26 0.3 52 5.7 0.4 2 23 1302 1323 1301 1323 0.93
18 26 7.7e-05 0.014 17.0 0.5 1 23 1329 1351 1329 1351 0.98
19 26 6.7e-05 0.012 17.2 0.9 2 23 1358 1379 1357 1379 0.97
20 26 0.0065 1.1 11.0 0.2 7 23 1465 1481 1465 1481 0.93
21 26 6.2e-05 0.011 17.3 2.7 1 23 1487 1509 1487 1509 0.99
22 26 0.0005 0.088 14.5 3.5 2 23 1516 1537 1515 1537 0.97
23 26 0.00054 0.095 14.4 3.2 1 23 1543 1565 1543 1565 0.98
24 26 5.7e-06 0.001 20.6 0.6 2 23 1773 1794 1772 1794 0.97
25 26 3.5e-05 0.0061 18.1 3.5 1 23 1800 1822 1800 1822 0.98
26 26 9e-07 0.00016 23.1 1.6 1 23 1828 1851 1828 1851 0.97

Sequence Information

Coding Sequence
ATGCTGACAAGTCAGAATGTATCTACGGAGATTTCGTGCATGGATACGACTCCGATAGGTTTAGTTGCGACTCAGGATGGTCGGACTCTTTTGGCAGTAACAGAACACGGAGACGGTATGCTGGAAATAGTTGCGACCCCCTTGACATTTATCGCACAAAATACAGTAACCCCAACGACGCTTGAGGTTAAAACAGTCGATGAAAATTTAAGCCTGCAGGCTTCCATCTTTCATGGGAGTACGGAGGACGAAGCCACAGGCATTTGCTGGTCGCAGTCCCAACCTTCGCAGATTCTTCGCGCCGTCCCTGTTATTTTCGAAAGAGCGGAAGCAGCCGAGAGTACCAGGGTCAATCTGGAAGCTGCAGTCGTCGATCGGTCGTCCCTCGTTTGCGAAAATTCTTTGCCCGAAGTAGAAAATTTGGAGATATCCGCGCCCGAGAGATCCCCCGCCGAGGTTCCAAAAGTACTCGCTCGCGGAAGAAGCCCCGGTAGACCAAAGAAGAACGATCCGCACGCTCGAGATGTGGAAAACTTCAAGTGCGACCTGTGTCATCGAGAATTTGAGAAGCGAACTCCGTACCGTAAACACATGGAAAGCCATGCGGAAGAAAAACCGCATCGATGTCCAAAGTGTCCGGCATCCTTCAACGTACCGACCAATTTCACGCTTCATATGGCGACGCACAATACCGGTGAGCCAAAGTGTCCTGAGTGCGGCAGAAAGTTTGCCAGGATGGCGAGTTTGAAGTCTCATTTGATGCTACACGAAAAGGAAGAGAGCCTCTTTTGTACCGAGTGCGAGGACGCGTTCTCGACTAAGGCTCAACTGGATGCGCATTTGAAGCTTCACGGAGAAAAATGGTCCACTGACGAAGCGCGAAAGTGTAAATTGTGCGAGAAGCGATTTGTTCAACCGGCTCTATATAGGCTTCATATTCGGGAACATTATCGGTTACAGACGAAAGTAACAAGACAGACGAAACGAGGGGCCAAACATAAGACAATGTACAAATGTACGATATGCTTGAAGTCCTTTCAAAAGCCCAGCCAGTTGATGCGTCACATACGAGTTCATACTGGCGAGAAGCCCTTTAAGTGCACGATATGTGGACGAGCATTCACGCAAAAAAGTTCTCTGCAAATTCACATGTGGCGACACAATGGCATTCGACCGCATACTTGCGATCTTTGCAATGCGAAATTCAGCCAGAAAGGTAACTTGAACGCCCATATTTTAAGGGTACACAACGCGCCCGAAGGCGAACCAACATACGGGTGTACTTACTGCTCCTGCGCGTTTAAAAAGCTTGGTAGCCTGAACGGTCATATCAAGAGGATGCACGTGATGGATATTAACCAAGACAGGTATTTTCAGGAAAGCACGACAGACGGCGAGAGTCAACGAGACGTCGCTGTCACGGAAGCTGATATGCGTGCGACCGTCGATAGCGTGATATCGCAGCTTGTTTCCTTGGAATCTAACGAAAAAGAGGTTGAAAATTCGATCCCCATCGCACGGTATGCAACGACTGCGACGGCCACCGCGACTATGGCACCCACGAGGAAGGACATCCTGCGGCAAGCGCTCAAGAACAGTGGTTTACCTGATACCTTCGAGACGAAGAAACTGGAAGCGCGAACAAATTTTGTAACGTTACTGGATGGAACAGCTGACAGTGGGACGAGAAAGTATCTGACGATAAAGCAGCGATGCGTCGGAAATGTGAGATGGTACGCGTGTTCCTTCTGCCACAAAGAATTTAAGAAACCATCGGATTTGATACGTCATTTGCGCGTGCACACGCAAGAAAAGCCTTTTAAATGTATGCACTGTTGTCGCTCTTTTGCTCTGAAATCGACCATGATAGCGCACGAGCGTACTCATGTTGTTGGAAAGAAATATGTTTGCGGATCGTGCAATAAAAGTTTCGCTTGTCAGAGCAGTTTGACCAACCATACGAGATTGCACGTAAAGCCCGATAATCGTACCGCCGGGGGGAACGAGGGGAACGAGGGAAGCGAAACTGCCGATGACACCGTTAAAGGAAACGACGATACTGACCGTGAGAGAGACGCCGACAACGGTCCAAGTTCCGACAAGACGATCGTCGGAGGCAGCTATGAAAGATCAGCTGGCTCAACGAGGAATCATTCGCGCGGCAGATTAAAATTATCGGCAGAAGTCCGAAGCCTAGTACCGGAGGTTGTTTTACAGGAGCCATTGGTTATCAGTGACACGGGTAATCGTATTTGCGTGGCGCAGGTACAGTCAAAGAGAAAACTAGCATACGAAGGTGTCGCCGATTCCGCGAGACCGCATAAATGCTGGGTTTGTCAGGCGGCCTTTCGAAAGATCAGCCACTTGAAGCAGCACTATCGGCGCCACACGGGAGAACGTCCATACGAGTGCACGAAATGCGAGAGGAAGTTTACATCAAACAGCGTTCTCAAATCACATTTGCACACTCACGAGGATTCGCGACCGTACAGTTGCTCCATTTGCGACACGAAATTCTCCACGCAGAGTAGCATGAAGAGACACTTGGTTACACATAGCAACAAAAGGCCGTTTATGTGCCCCTACTGTCACAAGACTTTCAAAACGTACGTCAATTGTCGGAAACACATGAAAGTGCATAAACACGAATTGGCGCAACGGCAACTGGAACGAGAAAAAGAAGCTGGCGGTGAGAGACGTTCGGCCGAGGAGGAAAACCTTACGACGTCCCCTGCCTCGACGTCCGCAATTGCGTCGGAGAACGTCGCGCTTACGCGGCTCGAAACTATAGAGATGTCGTATCAGTCGCAACTCACTTCGGACTTTGTACAAGCTTTTCCCGAGTTCCATGCTATGGAGGAAGAAAAGGGCAAGGCCGTTTTGTCGGCAAGTAACGTTACGTCGACCGTCGTCGATCAGAATTTATCGACTACTGGCCTCGGCTTGACCATCGATGCCTCGCAAATATTGCAGGCTGATGAAGCCGGCACTGTAACGGCGCTAACCACTCTACCGACCCTACCGACATACGCGGCGGATCAAGAGCTCACCCCGGAGAGTATACGAGAAATAGAGGAAACTTTGAATCAACAGCTCTTTAATATCGGTATTAACCTTGGCTTAACGAGCAACCTGCCCAAACAAATTGACGATACGGATGCAAGTGTCGTAGACGATGCGACACAGGGACGACGAGCGCATCGGCAACAAGAACAAGAACAAGAACAACAACAGCCGCGACAGCATCGTCAACAAGAAGAACCCGTTGTCAGTATCGTCTACGATAGCGAGAAACACTTAGGGTCAACAGGAAACAACATATTTGCTGCGCAGTTCGATTCGTTCGATATGAGTCAAATAACGGTTCAAGAAGACAGTGAGATCGACATGGATCTTGGTGCAACAAACTCGATGAGCATTTCGAATCTGTTGCCCAGTTCTACGAAAGTGGATGCACAATCGTCGTTGGAGGAGCAAAGGGAGGGAGAGCTGGTGACAGCGGAGACGGATCAACGGAAGCAGGAGAAGCAGGAGCAGCAAGAGCAGCATTCGGCTACAGTTTTGAGCCTGCCTCGAACAGATTCCAGCGGCGACTCGTCAAAGAAGGCATCGTGTTTGCGTGCCGTTATGCTAATTTCTAAGCAAGATTCCAGTCACGCGGAAATTTCATCCAAGATGCCGTTCGACGTTACGAACCACCCGGAGATCGACGCAACGAGCAACGATCGAGTCTCGGATCGTCAGGATGTCCTAGCTCCTACGTTTTTCTCGGAGCGGTTGAGCGAGGGCATGGAAAATACGGAAATTGAGATAAAAGTTGGTGCATCGGTGTCCCAGCCGGCCGAATCGATCGAGGTCGTGAGAGTCGAAGTGGCGGAGTCGAATCCACAGGAATCGTCGTTACAGTGTCACGTGTGTAACGAGCAGGGCTTTACAGCAACGGCATTGAAGGAACATCTCGGTAATCACGGCGGAGTAAAGGAGTATCGATGTACCGAGTGCCCTCTGAGATACAACACAAACGGTGGCCTCAACAGGCATTCGAGAATTCACGTCGGTAAACAAGAGTCAAAGTGCCAGTTGTGCGAAAAGATTTTTCGCAGCAAAGCGCAGTTGCGATCGCACGGAAGGATTCACGAAGAGGGTGCGGGCGAAGGAAAGCACGTACCGTGTTCCTACCAGAATGGCAGAGAGAACGAGCTACCGGGGATCGAGGATCGATCGATCGGTGCCTCGCCGAGCGATTATGCGGGATTGGAGACGGACTCGTTGGTGTCTGAGAAGGTTCTACTGGATACGGTGGCCGAAAGAGAAGTGATGGATCGAGCGGAGGTAAGACAATGGTCCTACGTACGATCCGACACTGAGTCGAACGGTGTAGGACGTAGGCAGGGTGTGACCTTCCGCAAGCCGAGCGACCTTACGCGTCATACGCGGACGCACACAGGGGAACGGCCGTACAAGTGCGACTACTGTGGCAAAAGTTTCGCGGTAAAGTGCACCCTCGATTCTCATACGAAGGTACATACCGGCAAGAAGACTCTTCGGTGTCACGTTTGCAGTAGCCACTTTGCCACGAAAGGCAGCCTAAAGGTTCACATGCGGCTACACACAGGTTCGAAGCCGTTCCGGTGTCAGATTTGCGATTTACGATTTCGAACTTCGGGTCACAGGAAGGTTCATCTACTGAAGCACGCGCGAGAATACAAAGTGGGCTCGAAGCGAAGGCAGAAACATTTGAAAGTTGCCGCTGTGGCGGAAGTAGCCGCCGATTTGGAGAAACCCGTCCCCGACTGTCCCGTTCCAACGGCGATTCCGATCGCGTCCGTTGCGTCAGGTATAACGAGAGTCCTCGCCCTCGATCAGCACGGACTCCTTCCTCAGGATGTCCAGAGATACGGGAATTTCGATGCCGTTGGGATCGAAGCCGACGGAACAAACGGACATCAGGTTGCCTTCGATGTCGACGCGTACGGCACGGTGTCCAACAACAACTCGATATTGTCCGTCAACGAGAGCAATCAGTTGGTGGCGAATCTACATTTTCTTCTAACGAACGGTCTCGTGACTATTCAAACGGAGGAGGAGGTGCCGGCGCATACGAGATCCACTACGATCGAGTGTCCTCGTTCCTGCGAATCTAACGAAACCAACGAATCCACGAGATCCTGTGATTCCGTTTGTCCTCTACCGAAGGAGCAAATCGGACGGCCGCCAACGATCCGGACGGTAATCCAGCCGGAACCCTCGGCGAACGAAAACTTGCCGGACGCTGAGGCAAGGGAAACGAGCAAAGGAAACAACGCATCGAGAAAGGAGTGCGACGTCTGCGGAAAAACATTTACAAAACCGTATCAAGTCGAGAGGCACAAACGTATTCACACGGGAGAACGACCGTACAAGTGTGAGCTCTGTGTAAAGTCATTCGCTCAAAAGTCGACCCTGCAGATGCATCAAAAGCATCATACAGGCGATCGACCGTATCCTTGTCCTCACTGTGAGTATTCTTTCACGCAAAAGGGTAATCTCAGGACGCACGTAAAGCGCGTCCATCGTTTGGACACGCTTGAAATCGATAAAACGAGACGCGTCCGACGAGGCGTTGTTTCCGAAACGCTTCGAGAACATCTTGCAGAGCCGAAAATTCTCGATTTGGACGACGTGTCGTTCGTTGAGTTTCTCAAATAA
Protein Sequence
MLTSQNVSTEISCMDTTPIGLVATQDGRTLLAVTEHGDGMLEIVATPLTFIAQNTVTPTTLEVKTVDENLSLQASIFHGSTEDEATGICWSQSQPSQILRAVPVIFERAEAAESTRVNLEAAVVDRSSLVCENSLPEVENLEISAPERSPAEVPKVLARGRSPGRPKKNDPHARDVENFKCDLCHREFEKRTPYRKHMESHAEEKPHRCPKCPASFNVPTNFTLHMATHNTGEPKCPECGRKFARMASLKSHLMLHEKEESLFCTECEDAFSTKAQLDAHLKLHGEKWSTDEARKCKLCEKRFVQPALYRLHIREHYRLQTKVTRQTKRGAKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKSSLQIHMWRHNGIRPHTCDLCNAKFSQKGNLNAHILRVHNAPEGEPTYGCTYCSCAFKKLGSLNGHIKRMHVMDINQDRYFQESTTDGESQRDVAVTEADMRATVDSVISQLVSLESNEKEVENSIPIARYATTATATATMAPTRKDILRQALKNSGLPDTFETKKLEARTNFVTLLDGTADSGTRKYLTIKQRCVGNVRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCMHCCRSFALKSTMIAHERTHVVGKKYVCGSCNKSFACQSSLTNHTRLHVKPDNRTAGGNEGNEGSETADDTVKGNDDTDRERDADNGPSSDKTIVGGSYERSAGSTRNHSRGRLKLSAEVRSLVPEVVLQEPLVISDTGNRICVAQVQSKRKLAYEGVADSARPHKCWVCQAAFRKISHLKQHYRRHTGERPYECTKCERKFTSNSVLKSHLHTHEDSRPYSCSICDTKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTYVNCRKHMKVHKHELAQRQLEREKEAGGERRSAEEENLTTSPASTSAIASENVALTRLETIEMSYQSQLTSDFVQAFPEFHAMEEEKGKAVLSASNVTSTVVDQNLSTTGLGLTIDASQILQADEAGTVTALTTLPTLPTYAADQELTPESIREIEETLNQQLFNIGINLGLTSNLPKQIDDTDASVVDDATQGRRAHRQQEQEQEQQQPRQHRQQEEPVVSIVYDSEKHLGSTGNNIFAAQFDSFDMSQITVQEDSEIDMDLGATNSMSISNLLPSSTKVDAQSSLEEQREGELVTAETDQRKQEKQEQQEQHSATVLSLPRTDSSGDSSKKASCLRAVMLISKQDSSHAEISSKMPFDVTNHPEIDATSNDRVSDRQDVLAPTFFSERLSEGMENTEIEIKVGASVSQPAESIEVVRVEVAESNPQESSLQCHVCNEQGFTATALKEHLGNHGGVKEYRCTECPLRYNTNGGLNRHSRIHVGKQESKCQLCEKIFRSKAQLRSHGRIHEEGAGEGKHVPCSYQNGRENELPGIEDRSIGASPSDYAGLETDSLVSEKVLLDTVAEREVMDRAEVRQWSYVRSDTESNGVGRRQGVTFRKPSDLTRHTRTHTGERPYKCDYCGKSFAVKCTLDSHTKVHTGKKTLRCHVCSSHFATKGSLKVHMRLHTGSKPFRCQICDLRFRTSGHRKVHLLKHAREYKVGSKRRQKHLKVAAVAEVAADLEKPVPDCPVPTAIPIASVASGITRVLALDQHGLLPQDVQRYGNFDAVGIEADGTNGHQVAFDVDAYGTVSNNNSILSVNESNQLVANLHFLLTNGLVTIQTEEEVPAHTRSTTIECPRSCESNETNESTRSCDSVCPLPKEQIGRPPTIRTVIQPEPSANENLPDAEARETSKGNNASRKECDVCGKTFTKPYQVERHKRIHTGERPYKCELCVKSFAQKSTLQMHQKHHTGDRPYPCPHCEYSFTQKGNLRTHVKRVHRLDTLEIDKTRRVRRGVVSETLREHLAEPKILDLDDVSFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-