Basic Information

Insect: Cerceris ruficornis
Gene Symbol: Bcl11b_1
Assembly: GCA_963989415.1
Location: OZ022524.1:17850433-17856430[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 1.6e-06 0.00028 22.3 3.1 1 23 339 361 339 361 0.99

2 31 3.8e-06 0.00066 21.2 1.1 1 23 367 390 367 390 0.95

3 31 4.7e-05 0.0082 17.7 1.1 1 23 396 418 396 418 0.99

4 31 6.5e-05 0.011 17.3 0.9 1 23 424 446 424 446 0.96

5 31 0.00023 0.041 15.5 2.9 1 23 452 474 452 474 0.97

6 31 0.00016 0.028 16.1 0.5 3 23 482 502 480 502 0.97

7 31 1.5e-05 0.0026 19.3 1.1 1 23 508 531 508 531 0.97

8 31 0.016 2.8 9.7 7.2 1 20 656 675 656 677 0.93

9 31 0.0075 1.3 10.8 0.2 1 23 733 756 733 756 0.94

10 31 0.00059 0.1 14.2 1.4 1 23 788 810 788 810 0.98

11 31 2.3e-05 0.0041 18.7 1.5 1 23 816 839 816 839 0.96

12 31 6e-06 0.001 20.5 0.3 1 23 845 867 845 867 0.98

13 31 4.3e-07 7.5e-05 24.1 1.0 1 23 873 895 873 895 0.98

14 31 0.00047 0.083 14.6 2.2 1 23 901 923 901 923 0.98

15 31 0.74 1.3e+02 4.5 1.0 1 11 929 939 929 945 0.87

16 31 3.8e-06 0.00066 21.2 1.7 1 23 1043 1065 1043 1065 0.99

17 31 2.8e-07 5e-05 24.7 0.5 1 23 1071 1094 1071 1094 0.96

18 31 0.0017 0.29 12.8 1.2 1 23 1100 1122 1100 1122 0.98

19 31 0.00011 0.019 16.5 4.3 1 23 1128 1150 1128 1150 0.95

20 31 0.00027 0.047 15.3 3.2 1 23 1156 1178 1156 1178 0.97

21 31 3.1e-05 0.0055 18.3 3.2 1 23 1184 1206 1184 1206 0.98

22 31 0.021 3.7 9.4 0.3 2 23 1239 1261 1238 1261 0.96

23 31 7.1 1.2e+03 1.4 1.7 1 23 1266 1289 1266 1289 0.68

24 31 2.3e-06 0.0004 21.8 3.1 1 23 1333 1355 1333 1355 0.98

25 31 0.0057 1 11.1 1.5 1 23 1383 1405 1383 1405 0.99

26 31 0.00021 0.038 15.6 1.9 2 23 1412 1434 1411 1434 0.94

27 31 0.00052 0.091 14.4 0.1 1 23 1440 1462 1440 1462 0.97

28 31 0.00091 0.16 13.7 1.4 1 23 1468 1490 1468 1490 0.97

29 31 0.00062 0.11 14.2 5.7 1 23 1496 1518 1496 1518 0.97

30 31 1.2e-05 0.0021 19.6 0.1 1 23 1524 1546 1524 1546 0.97

31 31 0.0031 0.54 12.0 2.9 1 23 1552 1574 1552 1575 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	1.6e-06	0.00028	22.3	3.1	1	23	339	361	339	361	0.99
2	31	3.8e-06	0.00066	21.2	1.1	1	23	367	390	367	390	0.95
3	31	4.7e-05	0.0082	17.7	1.1	1	23	396	418	396	418	0.99
4	31	6.5e-05	0.011	17.3	0.9	1	23	424	446	424	446	0.96
5	31	0.00023	0.041	15.5	2.9	1	23	452	474	452	474	0.97
6	31	0.00016	0.028	16.1	0.5	3	23	482	502	480	502	0.97
7	31	1.5e-05	0.0026	19.3	1.1	1	23	508	531	508	531	0.97
8	31	0.016	2.8	9.7	7.2	1	20	656	675	656	677	0.93
9	31	0.0075	1.3	10.8	0.2	1	23	733	756	733	756	0.94
10	31	0.00059	0.1	14.2	1.4	1	23	788	810	788	810	0.98
11	31	2.3e-05	0.0041	18.7	1.5	1	23	816	839	816	839	0.96
12	31	6e-06	0.001	20.5	0.3	1	23	845	867	845	867	0.98
13	31	4.3e-07	7.5e-05	24.1	1.0	1	23	873	895	873	895	0.98
14	31	0.00047	0.083	14.6	2.2	1	23	901	923	901	923	0.98
15	31	0.74	1.3e+02	4.5	1.0	1	11	929	939	929	945	0.87
16	31	3.8e-06	0.00066	21.2	1.7	1	23	1043	1065	1043	1065	0.99
17	31	2.8e-07	5e-05	24.7	0.5	1	23	1071	1094	1071	1094	0.96
18	31	0.0017	0.29	12.8	1.2	1	23	1100	1122	1100	1122	0.98
19	31	0.00011	0.019	16.5	4.3	1	23	1128	1150	1128	1150	0.95
20	31	0.00027	0.047	15.3	3.2	1	23	1156	1178	1156	1178	0.97
21	31	3.1e-05	0.0055	18.3	3.2	1	23	1184	1206	1184	1206	0.98
22	31	0.021	3.7	9.4	0.3	2	23	1239	1261	1238	1261	0.96
23	31	7.1	1.2e+03	1.4	1.7	1	23	1266	1289	1266	1289	0.68
24	31	2.3e-06	0.0004	21.8	3.1	1	23	1333	1355	1333	1355	0.98
25	31	0.0057	1	11.1	1.5	1	23	1383	1405	1383	1405	0.99
26	31	0.00021	0.038	15.6	1.9	2	23	1412	1434	1411	1434	0.94
27	31	0.00052	0.091	14.4	0.1	1	23	1440	1462	1440	1462	0.97
28	31	0.00091	0.16	13.7	1.4	1	23	1468	1490	1468	1490	0.97
29	31	0.00062	0.11	14.2	5.7	1	23	1496	1518	1496	1518	0.97
30	31	1.2e-05	0.0021	19.6	0.1	1	23	1524	1546	1524	1546	0.97
31	31	0.0031	0.54	12.0	2.9	1	23	1552	1574	1552	1575	0.94

Sequence Information

Coding Sequence: ATGGAGGCAGAAAACTCTGTTATACTAGAATCTTGCGGCGAAGATTCCATGCTGATACAAACTGTAAAGAGCATGGTCACGGAAAATACTCGCACCGAATTGGAAAGCGAGGAAAGATTCTTTGTCGTAACGGATGTTCAGGGTGAACAACAGACTGTGATGGAGGTAACGAACGAGGAGTGTGCAAACCAATCGGTTGAGAAATCATTATGGTCAGAACTGTGTAGAGTTTGTGCCAACGTTAACGATCATTTGATTCCAATATTTGAAGGAGAAGGTTTGCAACATGAATTGTGTactaaaatacacaaatatcTCCCTATACACGTATCCGAGAACGATACGCTCCCTTTACAGTTGTGTTATCATTGCGCCGCTACGTTATTAGCTTGGCACGAACTTTCAGAAGGATGTTTGGGTGCGGAACGACGTCTATTGGAGATGCAAAACAGCTGGGAAGAAAAGCAGTATTTTAATGCCGCATCTTGTAATGGATTGCAGACTGCCGTGCAACATACGACGACTGTACCCAACGTAGCGGAATCTCTCGACGAACAGCAAGACGTTGCGAAGGACGAAGCGTCTGGGGAAACCGCTATTAACGATTCGGACAGGTCCAGTAATATCCGGACACCATTTAAGGTGTTCCTAGACACGCAGAATGTATTTTGGAAGCCATACAGAAAAAAGTACCAGCCGCAAGAAAGAAAGCCAAGCATCGTCGGAGATTGCGATCCAGTTTGGATCGCCGTTATGGACACTACGCTCGACCAACCCGCCGTGATGTCCGATCAGCTGCGGAATAACGATATCGATATCAAGGAAGAGGTTTCCCAAACTCATAAGCAACACGACTTGGAAGAATTGAAAATCCACGATAAAACAGAACAATCGAACACTACTAAAACCGAGAGCAAAAAGGCAAAAACGAAATGTAAAGTTTGCAATCCGACGAGCTCCAAAGAAGCCTGCGAACACGTCAAGGTACACAGAGACGTAGACACTCAAGAATCTTATCAGTGCGTCGAGTGTGGAAAGTGCTTTAAGCTGAAGGATTCGTATTTGAGACACATGAGAATACACCGAGACGAGAGACCATTCACTTGTCACGTCTGCGGAAAGCAATTTCGTGATTCCGGTGGCCTCTCCAGGCATCTGAAGGACGTGCACGCGAAATTGAAGAACTTCACGTGCGATATTTGCAGTAAATCCTTCGCGTCCAAAGCAACGAGAGAGGATCATCGTAGAACTCACACAGGGGAGAGACCGTACATTTGCGATTCCTGCGGCAAGACGTTTAAATCGAAAGCTTCTTTGTACATTCACAGTAAATTGCACACAGACGAATTCCCACATCCGTGTTCCTATTGCAACAAGAAGTTTCGCAGGAGGCAGGAAATGCTGGCTCACGTGACGACTCACACGGGAGAGAAAAATTACGGATGCGACGTATGCTCGAAGAGATTCCGTGTGAAGTCCGAGCTCGTTAGGCATAAGCTCATTCATTCCGAGAGTAAACCATTCGTTTGCGTGAAATGCGGCCTAGCTTTTCGCCAAAAGCGTTACCTGAACAATCATATCAAAAGCAGACACGTTGAAACTTTACATAAATCAGCGAAAGTGAGAAAGATTCAAATCTGGTACGTTTATTATTTTTCCAGGTTTGGTCTACCACGGAAGAAATCCTTCGCTGAATACCGCACGTGGCATGCGACTACGATCAGTACGAATGATATGATAGAAATCAAACCCGTCGTATCGGAGAAAACGTGCGAAACGAGAAACGAGCGAGAGGAAAAAGTCGAAACAGAGACAGCCAATGAAGACCTTGCAAAATTTTCCGACGACGGTAATAGCACGGATTACAGCACGTTAGATACGATACAGGCGAATCTAAATCGTTTAGATTTTTCCAAGGAAACGTTATCACCCACGCGAACGCGAAATTCATCGCTGAAGAAGCAACACACTTGCCAAACTTGTCAGCGTAACTTTAAGACGAAGTGCCATCTAACGCGTCACGCTTCCAAGTGCAAATCTAAAAAGAGAATCGGCATCAGAGTCAAATCGCCAAGTAACATGCTTCAAAACGTCCAGAACAATCGACAGTCCAATACCAGAACTAGGAAGAATTCAAAAGTCGAAGAAAACAAAAACTGGGAGCTCTACAAAGGCAAGAGAAAACGCCTCGGAACTTATCCCTGCGTTTACTGCGATTACACCgccaagaagaagaaattgCTGGAAGTTCATCTGCTAGAATCTCATCCTGAATTCTCTGGAACGGAGAACAAGAGATTGCGATGTGCAGATCGTGAAATGGTAATGCGTGCTAAAATGGAAGTCGATGGAAAAGTCTACTATCATTGCGACGAATGCGGGAAAAATTTATATTCGCCGTATACTTTCTTCTGGCACGTGCGTATACACACTGGGGAACGTCCGTACACTTGCCATCTTTGTGGAAAGCAATTTCGCGTGAATCAAGGTCTCGCACGACATTTGCGAGACACTCACGCAGGCATAAAGAACTTCCCGTGCGACATTTGTGGCCGAATGTTCTCCACGAAACGAAATGCCGAGGATCATAGACGAATTCATACCGGCGAACGTCCATACATTTGCAACGTTTGCGGGAAGAGCTTCAAACAGAAGGCTTCTCTGTTCGTACACAATCGCACGCACTCCAATGTCTTCCCGTTTAAATGTACGTACTGTGATCAAAGCTTTCACACCAGACCACCGCTCATGGTGCACATAACGAAGCACACTGGTGAAAAGCCACACGCTTGCGACATATGCGGCAGGCGTTTTCGGATAAAGTGTAAAGTACGAGTCACTGAACTCGCTGAAACTAATGAAACAAGAGATCCGCGGTGCGGAACTATCACGAATAAACGAAGTAGCGATTTCATAGCGACGATCTCTAAGACTGAAACGAAGAAGCACGTGTCGACGTGTCACAGTATTAGTAGTCCTAACGAGGAACGTTTGATAGAGTTAAGAGGAGATAAAGATGACGAGGATGCGAAAAAGTCACGGAAACGGGGCGCACAGACTAAGCGAACGTTCGAGCAACGTTCCGAATTGGCTAGGTCGAAGATAATAGCTAATGGGATTACCTATTATAAATGTAACGATTGTGGGAAAACTCTGTCCACGTCGTACAACTTCTTGATTCATCGAAACAGTCATACAGGGGAGAAACCGTACACCTGCCACGTCTGCGGAAAGGGCTTCAGTTCGGCTTCCGGTTTGAACAGGCACGTGCGCGATGTTCACGCGGGGATCAAGAAATTCCCATGCGACATATGCGGACGTTGCCTGGCCTCGAGATCATCCCGAGATGAACATAGACGCACTCATACGGGAGAAAGACCCCATGTTTGCGAGACCTGCGGTAAATCGTTCAAACAGAAGGCATCTCTGCACGTTCACAGATCGTTCCATTCGAAAATCTTCCCCCATCGTTGCACCATGTGCGAGCAAAGCTTCAGGAGGAAGCAGGAATTAGATAAGCACATTTTCATCCATACAGAACAGAAACCATACTCGTGCGATGTCTGCGGTAAACGCTTTCGTAGCAAGGGCTGTATTAATCGTCATAAGCGTATTCACGGTAATGAAAGATCGTGGAAGACTGAGCCGAACGACGTCGTACAGATATCGACGGTTGATATTGAAAGTACAAACGCCGAGGAGGTAGAGTACATCGAGTGCGCCCAGTGCGACATCGTCTTCTTAGACATGAAATGCCTTATACGTCACATGAACACGGCGCACAACGTTCAGGTGTATTATTGTCAGTATTGTAATTTAGCTTATCGCGGAGAAACGAAAGACTTCGAGGAGCACATGTTGATGCATGATAATTCTTACGTGACAACGAAAGATGTTTCTCAGGAGGATGAGATGTTCGAGTATAAGATAGATAGCAATccggagagagagacggagattgCGGTAAAGTCGGAAGATCCGAGGAAGCCATTGTTATATACGTGCCACCTGTGCGAGGAGAGTTACACGAGAAAGAGCGAATTGAAGAGACATATAAGTAGCCATTGCGATACCAAAAGAATCCAGAATCCGGATGAAACTGAATTGGTTAACAGAGCGAAGCAAGTCGTGGATGATCGTGTGTCATACAGGTGCGATATATGCAAGAAAGACATGTTCACCAAGCGCGGATTTCTCCGTCACATTCGCGTGCATTCTGGcaaacgtccatgcaggtgcgATATTTGTGGGAAATGTTATAGAATAGAGCAAGATTTAGCTAGACACATAAGAGACGTTCACGAGGGCGTGAAGAAGTATATTTGCGATATCTGCGGACGAGCGTTTGCAAACAAAGGGGCGAAGGATGATCATAGAAGGATTCATACCGGTGAACGTCCGTACGCTTGCGAGCACTGTCCGAAAACGTTTCGTACTTTGAATTCCATTTATATTCATAATCGCGTACATACCAATTATAAGCCCCACAAGTGTTCATACTGCGGAAGGTTCTTTAGGAGTAAGCAGAGATTGACGAATCACGAGACCACGCACACGGGGATTAAAGCATTTTCTTGCGAGATCTGCGGCAAAACGTTCTCCGTGAAGGGAGAAGTTATGCGACATCGTGCGATACACAGCCAGGAAAAACCCTTTGACTGTAGAAGCTGCGGGGTGAAATTTGGGCAGAAGAGATACCTCAGGAATCATATAAAGCTACATCATAAAGAAGAGTCGTCCTTCTTGCTGACGGAACTTTTAGAGAATCGTAATTAA
Protein Sequence: MEAENSVILESCGEDSMLIQTVKSMVTENTRTELESEERFFVVTDVQGEQQTVMEVTNEECANQSVEKSLWSELCRVCANVNDHLIPIFEGEGLQHELCTKIHKYLPIHVSENDTLPLQLCYHCAATLLAWHELSEGCLGAERRLLEMQNSWEEKQYFNAASCNGLQTAVQHTTTVPNVAESLDEQQDVAKDEASGETAINDSDRSSNIRTPFKVFLDTQNVFWKPYRKKYQPQERKPSIVGDCDPVWIAVMDTTLDQPAVMSDQLRNNDIDIKEEVSQTHKQHDLEELKIHDKTEQSNTTKTESKKAKTKCKVCNPTSSKEACEHVKVHRDVDTQESYQCVECGKCFKLKDSYLRHMRIHRDERPFTCHVCGKQFRDSGGLSRHLKDVHAKLKNFTCDICSKSFASKATREDHRRTHTGERPYICDSCGKTFKSKASLYIHSKLHTDEFPHPCSYCNKKFRRRQEMLAHVTTHTGEKNYGCDVCSKRFRVKSELVRHKLIHSESKPFVCVKCGLAFRQKRYLNNHIKSRHVETLHKSAKVRKIQIWYVYYFSRFGLPRKKSFAEYRTWHATTISTNDMIEIKPVVSEKTCETRNEREEKVETETANEDLAKFSDDGNSTDYSTLDTIQANLNRLDFSKETLSPTRTRNSSLKKQHTCQTCQRNFKTKCHLTRHASKCKSKKRIGIRVKSPSNMLQNVQNNRQSNTRTRKNSKVEENKNWELYKGKRKRLGTYPCVYCDYTAKKKKLLEVHLLESHPEFSGTENKRLRCADREMVMRAKMEVDGKVYYHCDECGKNLYSPYTFFWHVRIHTGERPYTCHLCGKQFRVNQGLARHLRDTHAGIKNFPCDICGRMFSTKRNAEDHRRIHTGERPYICNVCGKSFKQKASLFVHNRTHSNVFPFKCTYCDQSFHTRPPLMVHITKHTGEKPHACDICGRRFRIKCKVRVTELAETNETRDPRCGTITNKRSSDFIATISKTETKKHVSTCHSISSPNEERLIELRGDKDDEDAKKSRKRGAQTKRTFEQRSELARSKIIANGITYYKCNDCGKTLSTSYNFLIHRNSHTGEKPYTCHVCGKGFSSASGLNRHVRDVHAGIKKFPCDICGRCLASRSSRDEHRRTHTGERPHVCETCGKSFKQKASLHVHRSFHSKIFPHRCTMCEQSFRRKQELDKHIFIHTEQKPYSCDVCGKRFRSKGCINRHKRIHGNERSWKTEPNDVVQISTVDIESTNAEEVEYIECAQCDIVFLDMKCLIRHMNTAHNVQVYYCQYCNLAYRGETKDFEEHMLMHDNSYVTTKDVSQEDEMFEYKIDSNPERETEIAVKSEDPRKPLLYTCHLCEESYTRKSELKRHISSHCDTKRIQNPDETELVNRAKQVVDDRVSYRCDICKKDMFTKRGFLRHIRVHSGKRPCRCDICGKCYRIEQDLARHIRDVHEGVKKYICDICGRAFANKGAKDDHRRIHTGERPYACEHCPKTFRTLNSIYIHNRVHTNYKPHKCSYCGRFFRSKQRLTNHETTHTGIKAFSCEICGKTFSVKGEVMRHRAIHSQEKPFDCRSCGVKFGQKRYLRNHIKLHHKEESSFLLTELLENRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -