Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_963989415.1
Location
OZ022523.1:18762948-18765614[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.15 2.3e+02 3.2 0.0 3 18 163 178 162 183 0.93
2 6 0.22 3.5e+02 2.6 0.0 20 44 217 245 207 247 0.81
3 6 1.4e-08 2.1e-05 25.7 0.2 1 45 253 299 253 300 0.95
4 6 1.1e-10 1.7e-07 32.4 0.2 4 43 310 353 308 356 0.96
5 6 9.4e-12 1.5e-08 35.8 0.0 1 44 362 406 362 408 0.96
6 6 2.8e-14 4.3e-11 43.9 0.0 4 43 418 457 415 460 0.95

Sequence Information

Coding Sequence
atggATCAGTACGAAGATGACGATGAGTACGATGACATGTTTCTGCTGGAGGATATATTTGATTTCAATAACGAAGATGAATCGGATCAAGATCCCAAAAGATATGAGCATGAACCGGCTACAATTGACATGTCAGAAGTCTATGCTCAAAATTATGAAAAGCTGAGTAGAGAGATCGGAGACGAAGTAATAGAATACGACCATAGGGAATTTAATGACATGGTAAATCTTAATAAAGAGTTAATGAGCTACATGTTGGATGTGAAGGGAAGTGTGATTTCTGCCCTTCATAAATGCGAACAGAAATTGAAAGCGGTAGACacctttttagaaaaatatgccAAAGGAGACATCAAAGTCTTGGCTTATAATGCTGGTATGCCTTACTTTAAAGACAAATCTTACTTTTTTGCTCCTAACAATGACGATGAATTAATTAAAGAAGCTCGTGGAGAGTTGGAAATCAATTTGCTTCCTAAAGTTTGTTCCTGGACTTCAAAAGAGAGGCATACCCTTTTAAAAGCCATACGGCAGGAAGCTTTTACAAATGTATTGCATTTGGAAGACCCAGAAAACTCCGATAGCGATGAAATGGAAGCTAGTCAAGAATTTTTACCGAAAAATTTTAGAGTAATGGTCGGTCCTTTAGGAAGTAAGAAATTCGATTGGCTTAAAATCTCTGTTCACTTTCAGGATAGACATCCACCAACCGATTGTCGAGGTATGTGGAACAGCTTTTTGCATCCAGATATAAACAAAAGCCCCTGGAAGAAACCAGAGAGTAGTAAATTGAAAATGATAGCAGAAAGATATAATTATCAGAATTGGGACAAGATCTCGGATGAATTAGGTACTAATCGTACAGCATACCAATGTTTCATTAGGTATAATACAACGAAGAAGTTACCCACAGTCACAAATTGCATGTGGGAACCCGAAGAGGACGAGATGCTCATAAAATTAGTAGAACTAtttaaaattggtgattttgtACCTTGGGGCGAAGTAGCTAGTTGGATGAACAATAGGACCAAACATCAGGTTTACTACCGATGGACATATAGCTTAGCACCATACTTGATAAAGGGTAGATTCACGAAATTGGAAGATGACCTTCTGAAGGTTGGTGTGACGAAATATGgcaaaaatttttctaaaatttctgcTGCTTTAATGCCCAATAGGTCCACGGTTCAGCTCAACGATCGTTATCAAAGACTAGCCGTTGACAAGAAGGAATATCCAAATCTATGGACGGCCGAAGACGATAAGAAACTCGTCGAAGTTTTTGAAGAACTCGGACCAAACTGGTCAACTATAGCTAAATCATTCTCAGGTAAAACGAGAACTCAACTTCGACATCGATATTCCAGTATACAGCGGCGTAAGCTATCTACTCTAATGCTGTCGACCGTTGAGTCTGACGAGGAAACTGAGGACTTTATCGACGTGGCACCCGTTTATAATAATGATACACTACACAACAGTGAAGACTTTAATGACAATGTAGATAAAGAAATAATAGAATATTTTCGGGCTACGCGAATGGCAGAACAGTCTAGTGAAGCGGTACAATTTTATGAAACGGAAGAACTGAATGATATTGTTAAGAAGTTATATGATATTCTACATTTACTGGATGCCAGACTCGATATTCCTGATAATATTGACGATGTACATCTAAACCATGCCGAGAGACAACTTCTATACGCGTTGAAAGAGTACATGAGAATAAACAATGACGAGAAGAGAAAACTTATAATGATAGAAAAATGTAGCTTAGTTATGTTTGGCCTCAATTACAATGAGAAAGGAAATTCTCACTTTGTTCCGCCGTTGCCTTACGACACGCGTGTAAAATTGAGAAAGGTCAGCCATacgcaattaattaattacaatttaaatgagaATAATGATTACCTTCTCGATGCATCTACCGAGATCTTCACACCTGATTATGTAATATCTTCCATTGGCGGTGAAGAACAAGAACGAGAATTTCAGAACCTCAATCGTCTATTGGCGTGCGATAACTCAAAATATCCAAAGAGAAATACCGTTAGAAAACTTTACATATTATCACCCAAAATTTTGAATCAGAAGGATAACGTGAAGCGCATGGGCAATGTAAACGGCAATGGCTCAAAGATTGGTAAATCGGTTCATCATTCTAAAATTCTCATCGATAAAGATGTCAAACGTGACCGTAAAACTGCGAAGTTGTTAAACGCAAATAATACAGATCAAGAATTAGACAGGAGACAACATGTGCCGTTCAGTTTGTTAGAAGAGCCATCATATTACCCACCTGTCCCTTATGTTGAAATCACgacgaaggaagaaagagaaaaggaaagtCCTGCACTGGAAACAACGTATGCGACATTacaatcatttaaaaatttaatgtaCTGCAATCGATTATACGGAccgaagaaaagaaatattgacGTCCCGCTTAATGTAAATGTAGACGCTGATGCGTTTCGAGATGCGTGTACTTTATTAGAAACACGACTGGAAcgattatttaaatatcctgCGTGTTTAGCTAAAACTGAATTACCACAACTTTATGATACGGATTTGTTTTCGTACGATAACGTTAAACCTGAAACGAAAATTAAACGTCGTACACAAAACACTGCGAAAAGATTGAAAATTTAA
Protein Sequence
MDQYEDDDEYDDMFLLEDIFDFNNEDESDQDPKRYEHEPATIDMSEVYAQNYEKLSREIGDEVIEYDHREFNDMVNLNKELMSYMLDVKGSVISALHKCEQKLKAVDTFLEKYAKGDIKVLAYNAGMPYFKDKSYFFAPNNDDELIKEARGELEINLLPKVCSWTSKERHTLLKAIRQEAFTNVLHLEDPENSDSDEMEASQEFLPKNFRVMVGPLGSKKFDWLKISVHFQDRHPPTDCRGMWNSFLHPDINKSPWKKPESSKLKMIAERYNYQNWDKISDELGTNRTAYQCFIRYNTTKKLPTVTNCMWEPEEDEMLIKLVELFKIGDFVPWGEVASWMNNRTKHQVYYRWTYSLAPYLIKGRFTKLEDDLLKVGVTKYGKNFSKISAALMPNRSTVQLNDRYQRLAVDKKEYPNLWTAEDDKKLVEVFEELGPNWSTIAKSFSGKTRTQLRHRYSSIQRRKLSTLMLSTVESDEETEDFIDVAPVYNNDTLHNSEDFNDNVDKEIIEYFRATRMAEQSSEAVQFYETEELNDIVKKLYDILHLLDARLDIPDNIDDVHLNHAERQLLYALKEYMRINNDEKRKLIMIEKCSLVMFGLNYNEKGNSHFVPPLPYDTRVKLRKVSHTQLINYNLNENNDYLLDASTEIFTPDYVISSIGGEEQEREFQNLNRLLACDNSKYPKRNTVRKLYILSPKILNQKDNVKRMGNVNGNGSKIGKSVHHSKILIDKDVKRDRKTAKLLNANNTDQELDRRQHVPFSLLEEPSYYPPVPYVEITTKEEREKESPALETTYATLQSFKNLMYCNRLYGPKKRNIDVPLNVNVDADAFRDACTLLETRLERLFKYPACLAKTELPQLYDTDLFSYDNVKPETKIKRRTQNTAKRLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00306181;
90% Identity
-
80% Identity
-