Cruf026704.1
Basic Information
- Insect
- Cerceris ruficornis
- Gene Symbol
- -
- Assembly
- GCA_963989415.1
- Location
- OZ022523.1:19426732-19428357[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-09 1.1e-05 26.2 0.0 1 40 12 51 12 56 0.90 2 2 1.8 4.3e+03 -1.3 0.1 30 44 125 139 125 140 0.80
Sequence Information
- Coding Sequence
- ATGCCACCAATCAAGGGTGCTTTCAGAAATTATTCTGAAGAAACAATGAAGGCAGCGATTGAAAATGTTCAGTTGCACAAAACACCCATAAGAACAGCTGCCCGAAGATTCGGCGTGCCAAGAATCACTTTAAAATATAAGGTAGAAGGTAAATCACCTATAGAAAGAAATATGGGTCCTCcttcaattttaaacaaaatagaGGAGGAAGAAATATGTAACTGGATTATAAACATGGCTGCTGCAGGGTTCCCAATAACAACTAATCAACTTATAACCAGTGTCCAGCGCTTCATAGATGAAGCCAAACGTCCAAATCCATTTAAAAACGGTCGTCCTGGGAAAACGTGGCTAAGGGCATTTTTGCGAAGAAACTCTACGTTATCGAAAAGAATTTCCCAAAACCTGACAATTTCACGCGCATCGGTCTCTAATACTCATATACGTAACTGGTTTTCTGgagtatataattatttaacagaACACAGTTTTGAAAAGATTTTAGATGACCCATCACGCATTTTTAACTCTGACGAAACAGCGTTCTTCCTAAATCCGAAGGGTAATAAAGTATTAGCAAAAAGAGGAGCTAAAACCGTTCAACAGCGAGTGAATGCTGATGAGAAAGAATGCTTGACTGCGTTGATAACATGCAGTGCGAGTGGTTTAGTTGCACCTACAACCGTGTTGTTTAAGTACAGACGCATACCGCCAGAAATTGTTAACAATTTTCCTAAAGATTGGGGTTTAGGCAAGACCGATTCAGGTTGGATGACCTGCGAAGCTTTCTTCGAATTTATTGCAAATGTGTTTCATCCATGGCTGGTAAAGGTCCGAGTTACCTTACCTGTGATTCTCTTTATTGATGGACATGTTTCACATTTAAGTTTCCAAACAAGTCAATTCTGTGAAAAAAATGGTATTATTCTCGTGGCCCTCTACCCTAACGCTACCCACCTATTACAACCCATGGATGCTGCCGTTTTCAAAACTATCAAAGAAGTTTGGAAGAAGAAAGTCCATGAGTGGAGGCTCCAGAATCTTGATGATCcaacattaaaaaagaaagatttttcGAAATTACTTAAGGAAGTGATTGACAATACTGTGAAGGAGAGTATTTTATACAATGGATTTCGCAAGTGTGGGTTATATCCGTGGAATCCATTAGCTGTCAAAATACCGGAACAAGAAAATACAATTGAAATTAGTGAGGACAGACAATTTCCGCGGATAAATTATTTACGACAGGGCCTGCAATTTTTAAACGAAAGCATCGAATTTGAAAAACTTGATATGTTTCGAAGCTCACCTGAACAATGGTCTGGAGATCCACAGGACACATCACTATTTACATTATGGAAAAAAACCCAAATCGAGTTGGACAAATTATGTACTTTAACTGAGAAACCTGTAAACGATGAAACAGCAATGTTGTTTATCGATGGAAATACTGAGGGTGAACATATTTTTAATGCCGATACGATTTCAGCTCTGCCACTTTTACAAGACGATTCAAATGAAACATTTTCGAATAATAATACTATTCCAAACAACGTCAGTCCTTCACCTGAATTGCATCAAAACCATGACGGGAGCTTCGTACCTAACAACAAAAGTAGTTAA
- Protein Sequence
- MPPIKGAFRNYSEETMKAAIENVQLHKTPIRTAARRFGVPRITLKYKVEGKSPIERNMGPPSILNKIEEEEICNWIINMAAAGFPITTNQLITSVQRFIDEAKRPNPFKNGRPGKTWLRAFLRRNSTLSKRISQNLTISRASVSNTHIRNWFSGVYNYLTEHSFEKILDDPSRIFNSDETAFFLNPKGNKVLAKRGAKTVQQRVNADEKECLTALITCSASGLVAPTTVLFKYRRIPPEIVNNFPKDWGLGKTDSGWMTCEAFFEFIANVFHPWLVKVRVTLPVILFIDGHVSHLSFQTSQFCEKNGIILVALYPNATHLLQPMDAAVFKTIKEVWKKKVHEWRLQNLDDPTLKKKDFSKLLKEVIDNTVKESILYNGFRKCGLYPWNPLAVKIPEQENTIEISEDRQFPRINYLRQGLQFLNESIEFEKLDMFRSSPEQWSGDPQDTSLFTLWKKTQIELDKLCTLTEKPVNDETAMLFIDGNTEGEHIFNADTISALPLLQDDSNETFSNNNTIPNNVSPSPELHQNHDGSFVPNNKSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -