Cruf039140.1
Basic Information
- Insect
- Cerceris ruficornis
- Gene Symbol
- SETMAR
- Assembly
- GCA_963989415.1
- Location
- OZ022530.1:9858117-9863482[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 5.8e+03 -1.7 0.0 20 37 61 78 59 85 0.73 2 2 3.1e-10 7.6e-07 29.9 0.0 4 33 163 192 160 197 0.92
Sequence Information
- Coding Sequence
- ATGGAAATCAGCGAAATTCGTGTGTTGATGAAGTATGAGTTCCACCGTGGAGCCACAACACGGCAGGCAGTCGCCAATATCAATAGTGTGTTCGGGATTCAAGTGGCTACAAACGCGACTACTCAGGTGGATAATGTCGTCCTGAAAGCCACTGTGCAAGCGAATCCCAGCCAAAGTGCATGTGAATTATCATTAATGCACAATGTATCAAAGCAAACAATCTTGACTCATTTGGCACAAATCGGTAAAGTGAAAAAGCTGGACAAGTTGATACCTGTCGCATACTGCGTCAAACCATGGGCGAAAACTACCCCCCAGAAGAGAAAGCTAGCTACGGTCCTGGTTTTTATGAGGACCCAAACGTTGGCCAGCACGTCTAGACAAAAGGGTGTGCTGGCAAATGTCAACCTCTCCCCCTCGGTCAAGCCGAATAAGGAgATGGCATCTACAACCAAAGAAAAGACCAGACAAACATGGGATAAAAATGCAATGGCAAATGCAATTAAAGCTATACGAGAAAAGCAAATGGGCTTTTTGAAAGCATCCAAAACATACGGAGTACCCAAAACTATGCTTATACGCTTATCAAAAATAGAAGACCAATCACTTAGCGACATTACGAACCATAAACTTGGAAGAAAATCGACTTTACCGAGTGCATTGGAAGATGAATTAGCTGATTATATTCTAGAAATGGAAAAATCTGGATTTGGTCTTATACGCAGGGACATCAAATCTTTGGCTTACCAGCTAGCAgaaaaaaaataa
- Protein Sequence
- MEISEIRVLMKYEFHRGATTRQAVANINSVFGIQVATNATTQVDNVVLKATVQANPSQSACELSLMHNVSKQTILTHLAQIGKVKKLDKLIPVAYCVKPWAKTTPQKRKLATVLVFMRTQTLASTSRQKGVLANVNLSPSVKPNKEMASTTKEKTRQTWDKNAMANAIKAIREKQMGFLKASKTYGVPKTMLIRLSKIEDQSLSDITNHKLGRKSTLPSALEDELADYILEMEKSGFGLIRRDIKSLAYQLAEKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -