Basic Information

Insect: Ceratosolen solmsi
Gene Symbol: stc_1
Assembly: GCA_000503995.1
Location: NW:9560420-9567019[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1 9.2e+03 -4.3 1.6 15 19 484 488 483 488 0.81

2 16 0.19 1.7e+03 -1.8 0.4 4 10 517 523 516 528 0.91

3 16 1.6e-07 0.0015 17.6 12.8 4 19 534 549 532 549 0.93

4 16 0.91 8.4e+03 -4.0 0.9 5 10 574 579 574 579 0.91

5 16 1.1e-08 9.9e-05 21.4 16.3 1 18 585 602 585 603 0.98

6 16 0.57 5.3e+03 -3.3 0.7 6 10 631 635 630 635 0.87

7 16 1.4e-07 0.0013 17.8 10.4 1 18 641 658 641 659 0.96

8 16 0.35 3.2e+03 -2.7 0.2 5 10 688 693 688 694 0.93

9 16 2.3e-06 0.021 13.9 13.4 3 18 705 720 699 721 0.83

10 16 1 9.2e+03 -4.7 2.0 5 10 750 755 750 755 0.91

11 16 0.00095 8.8 5.5 8.2 1 11 761 771 761 772 0.96

12 16 3.1e-09 2.9e-05 23.1 12.1 1 19 788 806 788 806 0.98

13 16 0.82 7.5e+03 -3.8 0.7 6 10 835 839 834 839 0.85

14 16 0.12 1.1e+03 -1.2 3.8 14 19 858 863 850 863 0.73

15 16 1.7e-07 0.0016 17.5 11.1 1 16 899 914 899 924 0.88

16 16 1.1e-05 0.1 11.7 11.9 3 19 932 950 931 950 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1	9.2e+03	-4.3	1.6	15	19	484	488	483	488	0.81
2	16	0.19	1.7e+03	-1.8	0.4	4	10	517	523	516	528	0.91
3	16	1.6e-07	0.0015	17.6	12.8	4	19	534	549	532	549	0.93
4	16	0.91	8.4e+03	-4.0	0.9	5	10	574	579	574	579	0.91
5	16	1.1e-08	9.9e-05	21.4	16.3	1	18	585	602	585	603	0.98
6	16	0.57	5.3e+03	-3.3	0.7	6	10	631	635	630	635	0.87
7	16	1.4e-07	0.0013	17.8	10.4	1	18	641	658	641	659	0.96
8	16	0.35	3.2e+03	-2.7	0.2	5	10	688	693	688	694	0.93
9	16	2.3e-06	0.021	13.9	13.4	3	18	705	720	699	721	0.83
10	16	1	9.2e+03	-4.7	2.0	5	10	750	755	750	755	0.91
11	16	0.00095	8.8	5.5	8.2	1	11	761	771	761	772	0.96
12	16	3.1e-09	2.9e-05	23.1	12.1	1	19	788	806	788	806	0.98
13	16	0.82	7.5e+03	-3.8	0.7	6	10	835	839	834	839	0.85
14	16	0.12	1.1e+03	-1.2	3.8	14	19	858	863	850	863	0.73
15	16	1.7e-07	0.0016	17.5	11.1	1	16	899	914	899	924	0.88
16	16	1.1e-05	0.1	11.7	11.9	3	19	932	950	931	950	0.94

Sequence Information

Coding Sequence: atggcCACCTGGGATGGCTCATATTCAGAACCAGATGGACCAAATTATTATgtcaattctaataaaaatcaaataccaGTAAATGTTCCAACATGGGACTATCTCTCTAATATTAACAACACTTGTGCACAAGATAAAACTATCccatatgtattaaatacttcTATGGTTTTTGAATCAAATATAcctagtttttataatagtgttaacagaaataatattccttttttaagttcaaatataaaacCAGAAAATTTAGAAACACGTAATGAAATACAAACTTGTGATAACaaaGTCCATGTAGAATCATCAGaaacacattttaaaaataataacgatcaGCTTCcaaatttctatgaaaataataagtcaGTAgatcaacaattatattattacaataaaagcaaattctataatagtagaaataaatatgtaaatagagATTATAAAGTAACTGATATTGTACAGCATTCAAATTTACATGCTACtgctaatgaatttttaccaaattataataaaaaaaataaagaatccaATACAAATTCAAgcaaaaatgaaacaatacaAACAAGCACATTAAATCAAACTAAAAATGTAGatcaatcatttaatatattttttgaaaataatagagaaagatataatgataaaaaatttgataaaggtGATGCTAATAAAATGTGGAgggataaacaaaataatcagaattataaatataataaaaaacacaatattaaaaagtatcaaaatgataaatgcactcatagaaaattttatgataaaacacgaaataatcaatatagaaataataatgaaactacTACTTTTGAAACCAATGCAAATAGTGAAGaagataaattactaaaagaatttcaagataaatatattggtagtaatatatatattttaccttttgaagcggataatttacaatacacaaaaaattcaaaaatattttcaaataatggtggtagatatgataaaaaaatacgatataattctaaaaactcTAGAAATTTTAGAGATACAAGAGattctattgatttaaatCATATGTATTCCAGAgacagaaaaaataattacttaaaatttagtggatgcaatcaaaataattataagaaagataaatatgaaagaagagaaactaaaaatttatttggagAGAATCGAAATACAGAAGTAACTGATTGGAGGCAAAAAGcaaataatgtagaaaataaaagtgcttcattgaaacatatttattataaaaaatatgaattagATGATGCAAGTCAAAGAGAAAGATTGACAGAGCAATTAAATCGTGGTCAATTAGAGTGTTTGGTTTGCTGTGATTTTATTCGACAAATTGATTATGTGTGGTCgtgtaaaaattgttatcatgTTTTGCACttgaaatgtttacaaaagtGGGCCTTATCATCACAAGATgAAAGTGGTTGGCGATGCCCAGCTTGCCAAAAGGTAACTTTAGGTGTACCATCTTACTATGAATGCTTCTGTGGCAAAATTCAGATGCCAAATTGGAATCGACACGATACTGCACATTCTTGCGGTGAAATGTGCGGTCGCATACATTCTGATTTAAATTGTGTTCATAAATGCACACTGCTCTGTCATCCAGGAGCATGTCCGCCCTGCTCAGCTATGGTCACTAAATCATGTGGCTGTGGTAAGATGTCTCAAATCCAGAAGTGCAGTACTGGACTGTTACTTAAATGTAATGATACTTGCGATAAGCCTCTCAACTGTGGTATACATAAATGTGAAAACAAGTGTCACCATGGCAATTGCGAACCCTGTGACAAAATTATCAAGCAAGAATgcttttgtttaaaatgcaGTCGGGAAGAAAAATGTGTTTTGAATTTACCTTCAACATATTCATGTCAAAACATTTGTAACAAGATATTAGattgtaataatcataattgtaaagaattttGTCACCCAGGTGAATGTAGATCATGTGTTTTAAAGCCTGAAGCAATTACAAATTGTTGCTGTGGTGAaactattttaactattaaaagagCAAACTGTTTAGAACCAATTCCAACATGTGATAAAATCTGtggaaaacaattaaaatgtgGTCAACCAAgtaAGGCTCATACCTGCCAATCAAACTGCCACCAAGGGGAATGCCCTGAGTGTGagttatttacaaaagtaaaatgtCGATGTGGTTACATGGATAAAGAAATTCCTTGCaaagaattaataacaaaGGCGGATGATGCTcgttgcaaaaaaaaatgtacaaaaaagcGTTCCTGTGGTAAACACAAGTGTAATCAAATGTGTTGCATTGATATTGAACATATATGTCCTCTAtcttgtttgaaatatttgagcTGTGGTAGACACAAATGTGAACAAACGTGTCATGgagGTAGATGTCTGACTTGTTGGCGTGTTAGTTTCGATGAACTCTACTGTGAGTGTGGTACAGCAGTAATTTACCCTCCAGTAGCATGTGGCACGCGTCGACCTGCTTGCAACAAACCCTGTTCCCGAAGTCATTCTTGTGATCATGAAGTTCTTCATAACTGCCACAGCGATTTGAACTGTCCTCCCTGCACTGTTCTTACTCAGAAATGGTGTTATGGCCAACATGAGCTGCGCAAAGCTGTGCCTTGTTATGTTAACGAAGTTTCTTGTGGATTACCATGTGGCAAATCTATTTCCTGTGGTAAACATAAATGTATTCAGATCTGTCATCCAGGCATCTGTGAGAAACTTggatatacatgcatacaacCATGTATGAACCCACGTGAGATATGCAATCACATATGCGCAGCACCTTGTCATAAGGGAAAATGTCCTGATGTACCATGTAAGGAAACGGTCAAGGTTACTTGCCAATGTGGAAACCGAACTATGTCTCGTTTATGTGCAGAAAATGCCAAAGATTATCAACGGATAGCTAGCAAAATTCTAGCCAGTAAAATGGCAGATATGCAGTTAGGGCATTCAATTGATCTTGAAGAAGTATTTGGTCAAGGATTAAAGAAGCAGAACCAATTGAAAACCCTTGAGTGTAAtgatgaatgtaaaataattgagagAAATCGACGTTTGACCCTTGGActacaaattgaaaatcctGATCTGTGTGGCAAGTTAATGCCTAGATATAGCGAGCACATGAGACAATGGGCTAAAAGGGATTCTGTCTTCTGTCAAATGGTGCATGATAAACTTACTGAGCTTGTACAGCTAGCTAAAGCATCTAAGCAAAAATCTCGCAGTTATTCTTTTGAAAGTATGAACAGAGATAAAAGACACTTTGTGCATGAGTTATGTGCACATTTTGGGTGCGAGAGCCAGGCCTATGATCAGGAACCAAAACGTAACATTGTTGCAACAGCTGTAAAAGATAagTGTTGGTTACCAAGTTATAGCTTGATGGAATTATTACAAAGAGAAAATGGACAACGAAAAGTACCAGGACCAATGTTGaataaatcgaaaattaatattattgataggagcaataatattttgcaactAAACTCAAAGAAGAGTTTAAAGTCTTTGTCTATAATATCAGTTTCACCATCAATGTCTCCAGAACCTGAAAtagattactttaattataagggGTGA
Protein Sequence: MATWDGSYSEPDGPNYYVNSNKNQIPVNVPTWDYLSNINNTCAQDKTIPYVLNTSMVFESNIPSFYNSVNRNNIPFLSSNIKPENLETRNEIQTCDNKVHVESSETHFKNNNDQLPNFYENNKSVDQQLYYYNKSKFYNSRNKYVNRDYKVTDIVQHSNLHATANEFLPNYNKKNKESNTNSSKNETIQTSTLNQTKNVDQSFNIFFENNRERYNDKKFDKGDANKMWRDKQNNQNYKYNKKHNIKKYQNDKCTHRKFYDKTRNNQYRNNNETTTFETNANSEEDKLLKEFQDKYIGSNIYILPFEADNLQYTKNSKIFSNNGGRYDKKIRYNSKNSRNFRDTRDSIDLNHMYSRDRKNNYLKFSGCNQNNYKKDKYERRETKNLFGENRNTEVTDWRQKANNVENKSASLKHIYYKKYELDDASQRERLTEQLNRGQLECLVCCDFIRQIDYVWSCKNCYHVLHLKCLQKWALSSQDESGWRCPACQKVTLGVPSYYECFCGKIQMPNWNRHDTAHSCGEMCGRIHSDLNCVHKCTLLCHPGACPPCSAMVTKSCGCGKMSQIQKCSTGLLLKCNDTCDKPLNCGIHKCENKCHHGNCEPCDKIIKQECFCLKCSREEKCVLNLPSTYSCQNICNKILDCNNHNCKEFCHPGECRSCVLKPEAITNCCCGETILTIKRANCLEPIPTCDKICGKQLKCGQPSKAHTCQSNCHQGECPECELFTKVKCRCGYMDKEIPCKELITKADDARCKKKCTKKRSCGKHKCNQMCCIDIEHICPLSCLKYLSCGRHKCEQTCHGGRCLTCWRVSFDELYCECGTAVIYPPVACGTRRPACNKPCSRSHSCDHEVLHNCHSDLNCPPCTVLTQKWCYGQHELRKAVPCYVNEVSCGLPCGKSISCGKHKCIQICHPGICEKLGYTCIQPCMNPREICNHICAAPCHKGKCPDVPCKETVKVTCQCGNRTMSRLCAENAKDYQRIASKILASKMADMQLGHSIDLEEVFGQGLKKQNQLKTLECNDECKIIERNRRLTLGLQIENPDLCGKLMPRYSEHMRQWAKRDSVFCQMVHDKLTELVQLAKASKQKSRSYSFESMNRDKRHFVHELCAHFGCESQAYDQEPKRNIVATAVKDKCWLPSYSLMELLQRENGQRKVPGPMLNKSKINIIDRSNNILQLNSKKSLKSLSIISVSPSMSPEPEIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -