Csol002058.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- ZNF219_1
- Assembly
- GCA_000503995.1
- Location
- NW:900396-904800[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.8e-05 0.0017 17.8 1.6 1 23 66 88 66 88 0.99 2 14 1.1e-05 0.00068 19.0 0.8 2 23 95 117 94 117 0.94 3 14 0.051 3.1 7.5 0.2 1 23 123 145 123 145 0.97 4 14 7.8e-06 0.00047 19.6 2.6 1 23 151 173 151 173 0.96 5 14 2.8e-06 0.00017 20.9 0.6 1 23 179 201 179 201 0.98 6 14 1.1e-05 0.00065 19.1 0.5 3 23 209 229 207 229 0.97 7 14 0.0033 0.2 11.3 0.9 1 23 235 258 235 258 0.95 8 14 6.4e-05 0.0038 16.7 1.3 2 23 426 447 425 447 0.97 9 14 0.00017 0.01 15.3 3.6 1 23 453 476 453 476 0.96 10 14 6.6e-05 0.004 16.6 1.6 1 23 482 504 482 504 0.96 11 14 4.5e-06 0.00027 20.3 0.7 1 23 510 532 510 532 0.97 12 14 0.0093 0.56 9.9 3.7 1 23 538 560 538 560 0.98 13 14 1.1e-06 6.8e-05 22.2 1.3 1 23 566 588 566 588 0.97 14 14 2.1e-05 0.0013 18.2 2.5 1 23 594 617 594 617 0.98
Sequence Information
- Coding Sequence
- ATGACCTCGACTTCACCGAACAGTCAGAAAAAACGAAAGCTAAAGGAGGCCTCAAGCCCGAATGTGAAGGAATTGAGGCCGAACGCCAGGGTGGGCAAATTGAGGAGGCTAGCAGGTGCTGAAGCGGGGACTCACAGTCAGCAACGTCGCCTCGAGGTGGCTCACTCGAAGATCAGCATCGACGGAGTGACATATTATAAGTGCCGTAACTGTCCTAAGGCCCTATCAACCTCGTACAACTACTTCGCCCACAAACGTATACATGCGCGCGAGAAACTTCTTACATGCAAGATATGCAGCAAGAATTTCACCGTCACGTCCTCGCTTACGCGCCACGTGCGTGATGTCCATGACAAGATCAAGGATTACGACTGTGGCTACTGTGAACGAAGACTCGCCTCACGTATTGCACGCGACGAGCATCAGAGAACCCACACTAACGAACGACCCCATATCTGCGAAACCTGCGGCAAAAGCTTTAGACAGCGAGCCTCCTTATCGGTGCACAAGAGGTTCCATTCCAAAAATTTTTCGTTCAGGTGCAGCCAGTGCGGCCGAGCCTTTCCACGTAAGCAAGATATGGAAAGACATGAGCTCACACATACAGATCAAAAGCCCTATGGCTGCAAGGTCTGCGGTAAAAGCTTCAGAAGTTCCGCTTCTGCCATTAGGCACAGACAAAGTCACGATTCATCAAGCAAATACATTTGCGATGTTTGTGGCGACAGCTTCAGCCAAGAGAGATACATGAAGAGTCACAAAACGAAGATGCACAAGGATGatcaaataaCTCTGCCAAAGGATACtttgtatacttttaattgCAGAGATTCTACAACAATCaataaagaattgaaattgGTTCAATCAGTCATATACATGTATGGAATTTGTAGCGAGTTctCCAATAGATTACAACGTGATTGTAGTACcttcaaagaatataaaagagcTTTCAGGGCTACTCTACCAGCTAAAAGGAGCCGCAAGAAAACTCCGAGCCCATCGAAGTCAGTGAAAAAGAGGAGCAGTCGCTCAATAAGGAAGAAGTCCATGCATAAAGTGACAAAAATGAAGATTACGTCAGATGTCCACTGCACCTCTATTAATCTTGAGTCAAAGAGCTCAGAATGCTTGAGTTTTGCTGAAGAAAAGTTCCAGGATTTAACGGAAGCAGAGGCTGAGATTGTCAATAATTCAGCTGAACTTAATCAATCACCAGAGGAGAACTCTAAGTCGAAAAAATCTTGTCGTGGACGTAATGGCTCAGGTCTCGAGTGCAGAGAgtgtaacaaaaaatttcgaCTTTACAATAGTTACCAGATACATATGAGAATACATACGGGTGAAAAGCCGTATACATGCCACATTTGTGGCAAGCAATTCGGTCAAACTGGCAGCCTCTACTATCATCTTAAGCACGTTCACGGAGGTGTTAAGAATCATGCCTGTGATATTTGCGGGCGTTGTTTTGCAATGAAAACGGCTATGGAGGATCACCGAAGGATACACACAGGTGAAAGGCCCTATATATGCGATTCTTGTGGCAAGTCATTTAAAACTAAGGCCTCATTGTACATACACAGCAAGATACACACTAACGAGTATCCCTTTAAGTGCTCTTATTGCAAGAAACTCTTTAGATGGAAGCAGCAAATGATGAATCATTTAACAACGCACACAGGCGAGAAAAATCATATGTGTGATATTTGTGGCAAAGGATTTGGTGTGAAGAATGAGCTTACCCGACACAGACGTACGCATTCGCTCGATAAGCCCTTCACTTGCCAAAAATGCGGAGTTAGCTTTGGACAAAAAAGATACTTAACTAATCATAATAGGACACGACACAAAACGAAGGTGACTAGCAATTGA
- Protein Sequence
- MTSTSPNSQKKRKLKEASSPNVKELRPNARVGKLRRLAGAEAGTHSQQRRLEVAHSKISIDGVTYYKCRNCPKALSTSYNYFAHKRIHAREKLLTCKICSKNFTVTSSLTRHVRDVHDKIKDYDCGYCERRLASRIARDEHQRTHTNERPHICETCGKSFRQRASLSVHKRFHSKNFSFRCSQCGRAFPRKQDMERHELTHTDQKPYGCKVCGKSFRSSASAIRHRQSHDSSSKYICDVCGDSFSQERYMKSHKTKMHKDDQITLPKDTLYTFNCRDSTTINKELKLVQSVIYMYGICSEFSNRLQRDCSTFKEYKRAFRATLPAKRSRKKTPSPSKSVKKRSSRSIRKKSMHKVTKMKITSDVHCTSINLESKSSECLSFAEEKFQDLTEAEAEIVNNSAELNQSPEENSKSKKSCRGRNGSGLECRECNKKFRLYNSYQIHMRIHTGEKPYTCHICGKQFGQTGSLYYHLKHVHGGVKNHACDICGRCFAMKTAMEDHRRIHTGERPYICDSCGKSFKTKASLYIHSKIHTNEYPFKCSYCKKLFRWKQQMMNHLTTHTGEKNHMCDICGKGFGVKNELTRHRRTHSLDKPFTCQKCGVSFGQKRYLTNHNRTRHKTKVTSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -