Csol004835.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceratosolen solmsi
Gene Symbol
ZNF236
Assembly
GCA_000503995.1
Location
NW:797919-829079[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 1.2e-05 0.00072 19.0 2.8 1 23 182 204 182 204 0.96
2 25 0.00049 0.029 13.9 0.3 1 23 210 232 210 232 0.97
3 25 9.9e-07 6e-05 22.4 0.2 2 23 238 259 238 259 0.98
4 25 0.0074 0.45 10.2 0.2 2 23 266 287 265 287 0.95
5 25 0.0022 0.13 11.8 2.2 2 23 298 319 298 319 0.97
6 25 1.3e-05 0.00079 18.8 0.6 1 23 340 362 340 362 0.99
7 25 5.1e-05 0.0031 17.0 0.9 1 20 368 387 368 390 0.96
8 25 1.1e-05 0.00066 19.1 1.5 1 23 396 419 396 419 0.97
9 25 0.0004 0.024 14.2 2.9 1 23 428 451 428 451 0.98
10 25 5.9e-08 3.5e-06 26.2 1.2 1 23 555 577 555 577 0.99
11 25 0.00011 0.0064 16.0 2.8 1 23 583 605 583 605 0.99
12 25 0.00061 0.037 13.6 0.8 1 23 611 633 611 633 0.96
13 25 6.9e-05 0.0041 16.6 2.3 1 23 637 659 637 659 0.95
14 25 0.00062 0.038 13.6 5.3 1 23 725 747 725 747 0.98
15 25 6.6e-07 4e-05 22.9 0.4 1 23 753 775 753 775 0.98
16 25 3.7e-05 0.0022 17.4 5.1 1 23 781 803 781 803 0.99
17 25 4.4e-05 0.0027 17.2 5.0 1 23 809 831 809 831 0.98
18 25 0.15 9 6.1 0.3 1 23 1122 1144 1122 1144 0.96
19 25 0.0015 0.088 12.4 5.9 1 23 1150 1172 1150 1172 0.99
20 25 0.00043 0.026 14.1 3.0 1 23 1178 1200 1178 1200 0.97
21 25 1.8e-07 1.1e-05 24.7 0.9 2 23 1235 1256 1234 1256 0.98
22 25 0.00021 0.013 15.1 0.5 1 23 1262 1284 1262 1284 0.97
23 25 3.2e-06 0.00019 20.8 1.0 2 23 1494 1515 1494 1515 0.98
24 25 2e-07 1.2e-05 24.6 2.7 1 23 1521 1543 1521 1543 0.99
25 25 3.7e-06 0.00022 20.6 4.1 1 23 1549 1572 1549 1572 0.97

Sequence Information

Coding Sequence
ATGATGGAACCatctatttttatgcattttatgcTCACCGATGACTGCAACACATTATTAGCTGTACGccAAGGAAGCGATGGAAGCCTAGAACTTATGACAACTCCAGTAACGGTTGTGCAAAACAACTTGGACAATCCAATACAATTGTTGAAAAACAATcaaaacaatgataatttattgaatcaagttaaattaagtaatatcgTACCAAATGTTTATCAACAAACTAATCTAACATCTATTGAGATAATCAATGCTAATTCTGAAGATGATCAagtgaataataaagattgtcaattagaattattaggtAATTCAGTGgatataaatgtacaaaataatgttacaaACATCCAAAATACAATAGAAGAAGTAAATGTGGATACAGATGAGAAGCAGACTGCAAAGAAATCAGAAATAAATTCGGCCTCGAAAGATGTTTCTGcaacttttaagaaaaatactcCTCCAAAAAAACATTCTCGAAAGAGTCTtggaagaataaaaaagaataaaacttCTAATGGGGAGCAATTTCGCTTTAAATGTGACATTTGTGGCCAAGAATtcaaaaaacaatattcattacaaaaacATGTACACGAACATACTCAAGATAAACCCCATAATTGTCCAAAATGTCCTGCATCGTTCAATATACCAattaattttacctTGCACATGGCTACGCATAATATGGGGGAGCCAAAGTGTCCTGAATGTGGTCGAAAATTTGCACGTCTAGCCAGCTTAAAGTCCCACATGTTGATCCATGAGGTTGATGAGAATCTGTACTGCACTGAGTGCGATGATGTCTTTGGAACGAAGAGCCAACTGGACGCCCACTCGAAGCTCCACAACGAGAAATGGTCCACCGACGACTACAGGAAGTGCAAGCTCTGCCGCAAGCAGTTCACCCAGCCGCTCCTCTATCGGCAGCACTTGCGCGACCATTATAAACTCCAGACCAAGACGACGAAACTGACGAGGCGGGGCATCCGGCACAGGACCGTTTACAAGTGCAGGCTGTGCCTCAAGGCCTTCCAGAAGCCGAGTCAGCTGGTCAGGCACATTAGGGTGCATACCGGCGAGAAGCCCTACAAgTGCAATTTGTGCAATCGAAGTTTCACGCAAAAAGGTTCCGTGAGAATTCATATGTGGCAACACAATGGCATCAGGCCCTATAGCTGCTCATTCTGCCATGCTAAATTTAGTCAAAAAGGCAATCTCAATGCGCACATCCTCAGGGTGCACAACACCCAAGAGGATTCGCCCGTCTACCGATGCAGCCAGTGCCCGTGCAAATTCAAGAAGCTCGGCAGCCTCAACGGCCACATGAAGCGAGTCCACAGTTCCGGCGGCAAGGCACGCGACGTCGACGGCGACCCGGACAAGGAGGAGGATCTGCCCGAGACCGAGACCGAGATGCAGCAGCCGGTCCCCGTGGTCTCCCAGCGGCCGGAAGTCATTAAGCCCGAGGCCGAGCGAGCGAGGCCCAAGGGCGTGGCCAGTGATTCGCGGAAAAGATCGGACGAGGGCTTCGTTGTGACGGATGACTGCGAGAAAACGGCGATGGTCACGCTTTTGGACAAAATGTCGAACGACGCGAAAGGaaagtatataaaaataaaacaacgaTTTGTAAATAACTCTAGACTTTACGAATGCTCTTTCTGTGATAAAACTTTCAAAAAGCCATCCGATCTTATGAGACATTTAAGAATCCACACCCAAGAGAAGCCCTACAAGTGCAAGATATGCAGCCGATCATTTACTTTGAAATCAACTATGCTATCGCACGAAAAGACTCATaagaattcaaaaaaattttcctgcAATTTGTGCACAAAGGTTTTCGCAACTGAAAAAGAGCTTCTACTTCATGAAAAGTTTCACAGTAAAAGCCACAAGTGCGGATTGTGCGGAAAGAAGTTCACCAGCTTCGATCAGCTGAAGACGCACTCGGCCGTTCACCAAAAGGGCAAGAGCGAGCAAGAAGGCGAAGGACTATTAACAAATCGGCGCAAGAGTCAGTACACTCCGGAAGTGCAGAGTCTCGCGCCCAAGGTCGTTCTTAAGGAGCCCCTAGTGCTTACCGAGGCGAGCAATGGCCTTCTCCATGCCCAACCCAAATTTCGCAATGAGATCGCCCACGGCAAGGGCAGGCCTCACAAGTGTCCTTCCTGTCCTGCGGCCTTTATAAAGCTGAGCCACCTTAAGCAGCACCACCGCAAGCACACTGGCGAGAGGCCCTTCGTCTGTGCCTTGTGCGACAGaaaattttcgACCAACAGTGCGTTAAAGGCTCATCGGCGAATACATGATTTATTGAAGCCGTATAAGTGTTACGTTtgcaatagaaatttttcaacatcGAGCAGCATGAAGAGACACCATATTACCCACAGTAATAAACGGCCTTATATGTGTCcgtattgtaataaaacgtTTAAAACAACGGTGAATTGTCGTAAGCACATGAAGGTACATAAGCAAGAAATTGCCCTACAGCAATTGGAATCTGAGAAAAAGCAGCAAGAGTGTTCAAATTATTCgtcgaataatattgaaataataatgacagatcaaaatattattaatgatcaaGAAATAACTTTCCAACCAATTACAAACGATTTGAGACCAAATTTAAACGAATCCATTGAAACGATGATTAAAGATAAAGATACACCTTTTATCACTATTTCTCCATCGTCGCAAAACATTAACGTGACAACGCAAAATATACCCCTAGTAGAGAATCCTAACATAGGTACAACTCAAGCATTACATGCCGATGAGACTGGCACTATTACCTTACCTAACTATTCGGGTAACCAATCGCTTACACCTGAGAGCATAAGAGAAATCGAAGAGACTTTAAATCAGCAATTATTTAGCATTGGAATGAATCTCGCGCTGAACAATACCGTCAGACAGATTGAGGAGCATAATAATCCTTCTCTGGAAAATCGCGAACAAcctattttaagtataatttatgataatggcAAGAGTTTGGAATCCTCCATTAATACGGCCATAAATGCAAATGTTTACACTTCGCAGTATGATGCATTTGACATTAATCAAATAACGTTGCAGGAGGACAATGACCTTGACATAGGAATAGCGCATCCTAATGCAACTAATATGGCTAGCATTTTACCACAATCTATACAAGAGCATTCGCAATATAATCCACAATTGATTGAtcaagattttcaaaatactgtCATTCTTAAGCCAGATTATTTGAAGAAGGACATGGAAGTATTTAACGATTCTTCGCTTATCAATATGGAAAAGGAGCCGTCGTCGTACAATGAAAGCAATAAGATCTTACTTACAGATCATAATTTTCAGTGCCGTATTTGCAATATGCCGCAATTTAGCACCGATGACCTCAACGAGCATTTAAAGATACACGAAGATAATAAGGAATATCAATGTAGCCAttgtttttcgaaattttgtaCAAACGCAGGCCttaataagcatttaaagGTCCATACAAGTTTAGAGACACATAAGTGTTACGAATGTAACGAGGAGTTTTCAACGACATTACAATTAAGAAAGCACATAAAAGATCACGTGAAGTTCGAGCTGCAACTCAAAAGTTTAACAGATCAAGacgatatgaatattaatcttGAATCGAAAAAGGACGATGAAATCGtcgataaaaagtataataaatgtaaatattgtccTAAGATTTTCCGTAAACCCAGTGACCTCATAAGACACGTTAGAACCCATACCGATGATCGGTTATTCGAATGTCCTCTGTGCGACATGACGTTCCCGACCTCCGGCCACCAAAAGCTGCACCTCGCATCCCACGAGCAGGATCCCAATCCATTGGTGAGCTCGGCGATCCAATCGATGGACGCGATGACGGGTATCGTGACACCCGAGCCCAATGATCCCAAGGACGGGCAGATCGTTCGGATCGTACACACGGCACCGGTGATCCAGCCGCTTCTCGAGCCGACGGTGGACGGCCATCAGACTATCGACGTGAACTCGGGCCTCGGTGGCCTAGCCGGCGATCAGATAACCTTCAATGCGGACGGCGCCGTTTCGAGCGACAGCAACGGCTTTCTCTTAAACGAGAATAACCAGCTCGTCGCCAATCTTCAGTTTCTGCTTGCCAATGGCCTCGTCACTATACATACGGAGGACCCGGCGCTCGCCTCTCAGCTGCCACTCTCCTCTTCGAGCTGCGCCCAGAATGACTTTCTCGCGACGAGCGTCGCGCAAAAGGTACAGGACCAGGCGACCGACCTCCAAGTCATATTCGCCGGTGAGATACCGGACGCGGTGGTGACTCCTTTAACCAACGAGGCCGATTTTCAGCTCAACAATAGCATGGTTTTGCAACTGGAAAATATCGACTCGACTGTGCCCGACAGGAACGACGAGAGATGTCTCAAGCAGATCAAGACAGCAAGTAGCGCAGCGAGGCGGCAGTGCGATATTTGCGGCAAGGCGTTCGCGAAGCCGTGCCAGCTCGAGCGGCACAAGCGCATTCACACGGGCGAGCGACCCTTCAAGTGCGACTTCTGCGGCAAGTCCTTCGCCCAGAAGTCGACCCTCCAGATGCACCAGAAGCGTCACACCGGCGACCGGCCCTACTGCTGTCCCCAATGCCAACGCTCGTTCACGCAGAGCGGCAACTTGCAGACGCACTTGAAGCGCAAGCACAAGCTCGATCCCGTAGAAACGAAGAGGCTCGCCAAGACCCAGCAATTCGTCAACTACGATCCGAAGCtcctgccgccgccgccgagCATCGAGGACCCAAGGGCGCTCAACTTCGACGACATGTCCATCGTCGAGCTGTTCAAGTAG
Protein Sequence
MMEPSIFMHFMLTDDCNTLLAVRQGSDGSLELMTTPVTVVQNNLDNPIQLLKNNQNNDNLLNQVKLSNIVPNVYQQTNLTSIEIINANSEDDQVNNKDCQLELLGNSVDINVQNNVTNIQNTIEEVNVDTDEKQTAKKSEINSASKDVSATFKKNTPPKKHSRKSLGRIKKNKTSNGEQFRFKCDICGQEFKKQYSLQKHVHEHTQDKPHNCPKCPASFNIPINFTLHMATHNMGEPKCPECGRKFARLASLKSHMLIHEVDENLYCTECDDVFGTKSQLDAHSKLHNEKWSTDDYRKCKLCRKQFTQPLLYRQHLRDHYKLQTKTTKLTRRGIRHRTVYKCRLCLKAFQKPSQLVRHIRVHTGEKPYKCNLCNRSFTQKGSVRIHMWQHNGIRPYSCSFCHAKFSQKGNLNAHILRVHNTQEDSPVYRCSQCPCKFKKLGSLNGHMKRVHSSGGKARDVDGDPDKEEDLPETETEMQQPVPVVSQRPEVIKPEAERARPKGVASDSRKRSDEGFVVTDDCEKTAMVTLLDKMSNDAKGKYIKIKQRFVNNSRLYECSFCDKTFKKPSDLMRHLRIHTQEKPYKCKICSRSFTLKSTMLSHEKTHKNSKKFSCNLCTKVFATEKELLLHEKFHSKSHKCGLCGKKFTSFDQLKTHSAVHQKGKSEQEGEGLLTNRRKSQYTPEVQSLAPKVVLKEPLVLTEASNGLLHAQPKFRNEIAHGKGRPHKCPSCPAAFIKLSHLKQHHRKHTGERPFVCALCDRKFSTNSALKAHRRIHDLLKPYKCYVCNRNFSTSSSMKRHHITHSNKRPYMCPYCNKTFKTTVNCRKHMKVHKQEIALQQLESEKKQQECSNYSSNNIEIIMTDQNIINDQEITFQPITNDLRPNLNESIETMIKDKDTPFITISPSSQNINVTTQNIPLVENPNIGTTQALHADETGTITLPNYSGNQSLTPESIREIEETLNQQLFSIGMNLALNNTVRQIEEHNNPSLENREQPILSIIYDNGKSLESSINTAINANVYTSQYDAFDINQITLQEDNDLDIGIAHPNATNMASILPQSIQEHSQYNPQLIDQDFQNTVILKPDYLKKDMEVFNDSSLINMEKEPSSYNESNKILLTDHNFQCRICNMPQFSTDDLNEHLKIHEDNKEYQCSHCFSKFCTNAGLNKHLKVHTSLETHKCYECNEEFSTTLQLRKHIKDHVKFELQLKSLTDQDDMNINLESKKDDEIVDKKYNKCKYCPKIFRKPSDLIRHVRTHTDDRLFECPLCDMTFPTSGHQKLHLASHEQDPNPLVSSAIQSMDAMTGIVTPEPNDPKDGQIVRIVHTAPVIQPLLEPTVDGHQTIDVNSGLGGLAGDQITFNADGAVSSDSNGFLLNENNQLVANLQFLLANGLVTIHTEDPALASQLPLSSSSCAQNDFLATSVAQKVQDQATDLQVIFAGEIPDAVVTPLTNEADFQLNNSMVLQLENIDSTVPDRNDERCLKQIKTASSAARRQCDICGKAFAKPCQLERHKRIHTGERPFKCDFCGKSFAQKSTLQMHQKRHTGDRPYCCPQCQRSFTQSGNLQTHLKRKHKLDPVETKRLAKTQQFVNYDPKLLPPPPSIEDPRALNFDDMSIVELFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00304580;
90% Identity
iTF_00304580;
80% Identity
-