Csol001837.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- -
- Assembly
- GCA_000503995.1
- Location
- NW:836708-839447[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-08 1.3e-05 24.3 0.1 1 38 13 51 13 59 0.94 2 2 0.64 3.7e+02 0.4 0.0 8 20 91 103 90 106 0.87
Sequence Information
- Coding Sequence
- ATGAACGAAGATGAATTTaagtcttattttataaagaaaaaaagatggaCTGAAAATGAGAAACGAATCTTATTAAAAGgtcttaaaaaatatggatCTAAAAACGTTCAAAAATTGAAGCCGCTTTTACCAAATAAAtctacaaattcaattttgcaAATGATTAGAAAATATCAAACGATTGCAGATCTAGGGAAAAAAGATGTAAATTCTCCGTTAGATGTATGGTTAAGAAGTGGCATTTTTAGTGgagaaaatattcttatctcTGAAGCTTTgttgtttatacatttatttgaaaaacaccCACCTCCAGAAGAAACTGCTGGCTttgatattaaagAGACATATAAATTTCTGTATGAAGCAACAAAAGGACAGCCAATAACCAATTTATCACGAAAAACGACAGaaatgtttaaacaattaatacttACAGTAGATAAAGAAATTTGGCCTGCAGACGAATGTAATACAACAGACTATTTAATTGgtaaattatgtacaattgaaccagaaaaatgttataaaagaaaaaaagcaaaaattaagaatataaataaataa
- Protein Sequence
- MNEDEFKSYFIKKKRWTENEKRILLKGLKKYGSKNVQKLKPLLPNKSTNSILQMIRKYQTIADLGKKDVNSPLDVWLRSGIFSGENILISEALLFIHLFEKHPPPEETAGFDIKETYKFLYEATKGQPITNLSRKTTEMFKQLILTVDKEIWPADECNTTDYLIGKLCTIEPEKCYKRKKAKIKNINK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01216716;
- 90% Identity
- iTF_01216716;
- 80% Identity
- -