Csol001421.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- bab1
- Assembly
- GCA_000503995.1
- Location
- NW:7275062-7521672[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-17 1.5e-14 52.5 0.0 1 43 372 415 372 417 0.95 2 2 1.8 1.8e+03 -2.2 0.8 6 15 494 503 490 504 0.87
Sequence Information
- Coding Sequence
- ATGACGCAGCAGAGCGGCGCCGGCTCGCCCCAGCAGTTCTGCCTGCGCTGGAATAATTACCAGACCAACCTGACCAACGTGTTTGACCAGCTGCTCCAGAGCGAGAGCTTCGTCGACGTGACGCTCGCCTGCGACGGACACTCGGTCAAGGCCCACAAGATGGTCCTCTCGGCCTGCAGCCCCTACTTCCAAACCCTCTTCTTCGACAACCCTTGCCAACACCCGATCGTCATCATGAAGGACATAAAGTGGCCGGAGCTCAAGGCCGCGGTCGAGTTCATGTACAAGGGCGAGATAAACGTATCGCAGGAACAGATCGGACCGCTCCTCAAGGTCGCGGAGAGCCTCAAAATCCGCGGGCTCGCCGACGTGAATAGCGAGCACGAGCTGACCTCGCGGCCGAGCCTCGAGGATTCGCTCAATCTCGCGGGTGACCTTCAGCGTAAGAAGCGGCGCCTGGCTTCGGCCGAGCGCTCGCCGACCGCGAGCCACGGCAGTCCGGAGCGTATCGCCTCGGACGAGCACGACTCGGCGAGCACCGGCCAGGAGAGCCACGGCCTCGGCTCCTCCTCGACGCCGCGCTCCCTCGGCTCGCCCAGTGTGCCCAGCATCAGCGTCACGCCCCAGATAAACCTGCAGGAGCTGCCCGTGAGCCTGCCcctaccgccaccgccgccccTGCCCCCGCCACCAAGCGGACAGAGCGGGGCGCATCCCTCGCTCGTCGGGCACCACGTGTCCGCGGGCCACGTGAGCGCCGGCCCGCACGCGGCCGTCAACCACCTGGGCGGCCACGCGcagcagcagcagcaacagcaacagcaacagcaacagcaacaacagcagcaacagcagcagcagcacctgCAAGCCGGACAGCCCCCTTTGGGGGAGGACCCGGACTTGAAGCCCGGCATCGCCGAGCTCATTCGCGAGGAGGAAAGGGCCAAGTTGTTGGAATCATCCCACGCTTGGCTCGGAGCCTCCACCTCCAGTATAGCAGCAGACAGTTATCAGTATCAATTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAATCAGAGTCTCGTGCACAATCTGCGCTTTCGAGAACGCGGACCTTTGAAGTCTTGGCGGCCGGAAACGATGGCGGAAGCGATCTTTAGTGTACTAAAGGAAGGTCTCTCGTTGAGCCAGGCTGCCAGaaaatacGATATTCCATACCCGACGTTCGTACTTTACGCGAACCGAGTCCATAATATGCTCGGACCGAGCGCCGACGGTGGAGCCGATTTACGGCCGAAGGGCCGGGGGAGGCCCCAAAGGATCCTGCTCGGCGTCTGGCCTGACGAGCACATTCGCGGCGTGATCCGGGCGGTGGTCTTCCGTGACGGACATTCGCCCCACATCGTCAAGGAGGAGCCCACCACCATGTACCCCGCCCTGGCGAATTACGGCGCCTGCAACGGACCCGAGGGAGCAGTCAGCCCCAGCGCAGCTGCGGCCGCAGTCGCTGCCGTCGCTCAAGGTCTGCGACACCAAATGTGCAGTATGGTCGCCGCGGCTCACTCCCAGCAACACGACATGTTGGCGACGAACCTCTCGACGAGCCTCTCGTCCAACCTCTCCTCGAACCTCCAGGCAGCAATGCAACAGGCGAgccaacagcagcaacagcagcagcaacatcaCCAGCAGCATCAacagcaccagcagcagcagcagcagcagcaacaacaacagcatcaccaccatcaccatcaccaccacaaTAATAACGGGGCCGGGATGATGGGTCCGGGTGCGGGAACGCCCGGGCTCGGGGGCGGGAGCGGCGGGGGCGGCAGCAGCAACCACGGCAACTCGCCGCTGAACCTCGGGCTCGCGAGCCCCGGCTCCGGTGGCCCCCCCGAGAGCCCGATGGAGTCGCCCCTGGCGAGTCCCCTCGGCGCCCTCATTGACCCCTCGCACTTGTCCTCGAGCGTCGAGGTCGGAATCGGCGTCAGCGGCATGACTTATAAGCCCGCGCGCAGCTTCGTCAGCCCCCGGCCCCAGATCGTCAAGAGCTCGCACGCGGCTCtcaaggagaaggagaagatCGCCGTCAAACTCGAGCCCCTGACGGACTCGCGGTGCGAATAG
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQTLFFDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNSEHELTSRPSLEDSLNLAGDLQRKKRRLASAERSPTASHGSPERIASDEHDSASTGQESHGLGSSSTPRSLGSPSVPSISVTPQINLQELPVSLPLPPPPPLPPPPSGQSGAHPSLVGHHVSAGHVSAGPHAAVNHLGGHAQQQQQQQQQQQQQQQQQQQQQHLQAGQPPLGEDPDLKPGIAELIREEERAKLLESSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPALANYGACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTSLSSNLSSNLQAAMQQASQQQQQQQQHHQQHQQHQQQQQQQQQQQHHHHHHHHHNNNGAGMMGPGAGTPGLGGGSGGGGSSNHGNSPLNLGLASPGSGGPPESPMESPLASPLGALIDPSHLSSSVEVGIGVSGMTYKPARSFVSPRPQIVKSSHAALKEKEKIAVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305713;
- 90% Identity
- iTF_00305713;
- 80% Identity
- iTF_00305713;