Csol002456.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- ATFC_1
- Assembly
- GCA_000503995.1
- Location
- NW:6409577-6436159[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1 2.4e+03 -2.3 1.7 26 60 134 168 131 172 0.69 2 2 2.9e-15 1.3e-12 46.6 12.7 2 63 396 457 395 459 0.96
Sequence Information
- Coding Sequence
- ATGTCAGCCGACCAAGACACAACAACGATGTGGAAGGTGGAGCCTGTATCCCCTAGTGGGACTCCGCCGCTTGACATTGACGAAGAATGGCTCTGTTTCGACGAAAAACCTGCGGTACTCGAGGGTATTGGCGAAGTCGCCGTGCTCTTCGAGGAACAACTTACACGTGCACAAGTCGcttcaaaatttttagaagAGTTAGAGTTAAAGAACTGGATTAAAGAAGAGTCCTTTGCCGATTGGCTCGAAGAGAAAATCGACTTGCCGATCTTCGAGGAGCTTCCGGCCCCGGAATGCGGACAGAACCGCGCGATCGTATACCCGAGTACGGTCAAGCACCAACATCCGGTGCTCGGCCaacatcaccaccaccaccaccacaaccaccatcaacatcaacaacagcaacaacgacAGCAACAGTCGCAGCAGCACGTCGATGCTACGCAAACGCTACTACGCGAATTCGAGACGGTCCTCGGTGACGTCGAGGCCTGTCACCAGATAAACTCGACGGGCATCGTCTCGACCTTGACGCCTCCTCAGTCACCACCACCCCTCGCTAAACAAAATCTACTCATCGCGCTACAACCCGTTCACCAGAATCAGGCGACCTTCGTCTACGAGCAGCAGCGCCAGCGGCACCACGAGGAACCGTCATCGATCGCCTCCTCGCTCGGCAACCATGAACATCATCATGAGTCGCTTCTGCAGCCGCACCCACACCCGGAGAGCTATATTATTTCGAGTTCCCTCGTGAGCGATTCCGGCAACCAGCAGATCACCGCCCAATGGAACGCGGAGAATCTCTCGCTGGTGCCCCTCGTCCATGGGAACGATGTCGCCCACGAGCTCGCCAAAGTCGACGAATACGTACGCAGCTGTTGCGAGGACGTTCCCGTGACTTCGGGATCCTCGTCCggctcctcctcatcctcgcCCCCCTCGCCCTGCACGAGCTCAAACGCGAGCTGCATCTCGTCCGAGGACTCGGCTGACGATCCCGATTGGTCCTTCGAGAGCGGCGGCAGTGGCAGCGGCGGTGGCGACAGCGGTACCTGTACCGGTACCGGCACCGGCACCGGCACCGGCAccggcagcggcagcagcagcatcagcaaTGGACGCAAACATGGACAGGGGCGCGCCGGACGACGAGTCAAGCCGTACGCGAGACCGAGCGTCGAGGACAAGCGCGTGCGCAAGAAGGAGCAGAACAAAAACGCTGCCACGCGCTACCGTCAAAAGAAGAAGCAGGAGATCAAGGAGATACTCGGTGAAGAGCAAGAGCTGGCCACAAGGAATGAGAAACTGCAGAACCAGGTTAAGGATCTGCAGCGCGAGATCGGCTACCTCAAGAGCCTTATGCGCGACCTCTTCAAGGCCAAGGGCCTCATCAAATAG
- Protein Sequence
- MSADQDTTTMWKVEPVSPSGTPPLDIDEEWLCFDEKPAVLEGIGEVAVLFEEQLTRAQVASKFLEELELKNWIKEESFADWLEEKIDLPIFEELPAPECGQNRAIVYPSTVKHQHPVLGQHHHHHHHNHHQHQQQQQRQQQSQQHVDATQTLLREFETVLGDVEACHQINSTGIVSTLTPPQSPPPLAKQNLLIALQPVHQNQATFVYEQQRQRHHEEPSSIASSLGNHEHHHESLLQPHPHPESYIISSSLVSDSGNQQITAQWNAENLSLVPLVHGNDVAHELAKVDEYVRSCCEDVPVTSGSSSGSSSSSPPSPCTSSNASCISSEDSADDPDWSFESGGSGSGGGDSGTCTGTGTGTGTGTGSGSSSISNGRKHGQGRAGRRVKPYARPSVEDKRVRKKEQNKNAATRYRQKKKQEIKEILGEEQELATRNEKLQNQVKDLQREIGYLKSLMRDLFKAKGLIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -